RNA–Protein interactions for RNA: ENST00000352845.3

PKP1-202, Transcript of plakophilin 1, humanhuman

TSL 5 BASIC

Gene PKP1, Length 2,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP1-202ENST00000352845 ADORA1P30542 326 aa11.62□□□□□ -0.55
PKP1-202ENST00000352845 MSH2P43246 934 aa11.62□□□□□ -0.55
PKP1-202ENST00000352845 NCALDP61601 193 aa11.62□□□□□ -0.55
PKP1-202ENST00000352845 SPA17Q15506 151 aa11.62□□□□□ -0.55
PKP1-202ENST00000352845 NTRK3Q16288 839 aa11.62□□□□□ -0.55
PKP1-202ENST00000352845 TCP11X2Q5H9J9 407 aa11.62□□□□□ -0.55
PKP1-202ENST00000352845 SH2D4BQ5SQS7 431 aa11.62□□□□□ -0.55
PKP1-202ENST00000352845 IRGCQ6NXR0 463 aa11.62□□□□□ -0.55
PKP1-202ENST00000352845 WDR59Q6PJI9 974 aa11.62□□□□□ -0.55
PKP1-202ENST00000352845 DYDC1Q8WWB3 177 aa11.62□□□□□ -0.55
PKP1-202ENST00000352845 ZNF317Q96PQ6 595 aaPredicted RBP11.62□□□□□ -0.55
PKP1-202ENST00000352845 PIDD1Q9HB75 910 aa11.62□□□□□ -0.55
PKP1-202ENST00000352845 ADAM22Q9P0K1 906 aa11.62□□□□□ -0.55
PKP1-202ENST00000352845 CIDEBQ9UHD4 219 aa11.62□□□□□ -0.55
PKP1-202ENST00000352845 MYH7P12883 1935 aa11.62□□□□□ -0.55
PKP1-202ENST00000352845 COL5A2P05997 1499 aaPredicted RBP11.62□□□□□ -0.55
PKP1-202ENST00000352845 A0A1B0GVG6 124 aa11.62□□□□□ -0.55
PKP1-202ENST00000352845 MACROD2A1Z1Q3 448 aa11.62□□□□□ -0.55
PKP1-202ENST00000352845 PPP1R3GB7ZBB8 358 aa11.62□□□□□ -0.55
PKP1-202ENST00000352845 GUCY2FP51841 1108 aa11.62□□□□□ -0.55
PKP1-202ENST00000352845 POLE2P56282 527 aa11.62□□□□□ -0.55
PKP1-202ENST00000352845 STX17P56962 302 aa11.62□□□□□ -0.55
PKP1-202ENST00000352845 FKBP4Q02790 459 aaKnown RBP eCLIP11.62□□□□□ -0.55
PKP1-202ENST00000352845 UBXN1Q04323 297 aa11.62□□□□□ -0.55
PKP1-202ENST00000352845 PPARAQ07869 468 aa11.62□□□□□ -0.55
PKP1-202ENST00000352845 ZNF844Q08AG5 666 aa11.62□□□□□ -0.55
PKP1-202ENST00000352845 PABPC4Q13310 644 aaKnown RBP eCLIP11.62□□□□□ -0.55
PKP1-202ENST00000352845 TRIM29Q14134 588 aa11.62□□□□□ -0.55
PKP1-202ENST00000352845 TMEM154Q6P9G4 183 aa11.62□□□□□ -0.55
PKP1-202ENST00000352845 PHKBQ93100 1093 aa11.62□□□□□ -0.55
PKP1-202ENST00000352845 IFT43Q96FT9 208 aa11.62□□□□□ -0.55
PKP1-202ENST00000352845 RAB3IPQ96QF0 476 aaPredicted RBP11.62□□□□□ -0.55
PKP1-202ENST00000352845 IWS1Q96ST2 819 aa11.62□□□□□ -0.55
PKP1-202ENST00000352845 SYT15Q9BQS2 421 aa11.62□□□□□ -0.55
PKP1-202ENST00000352845 UBE2OQ9C0C9 1292 aaKnown RBP11.62□□□□□ -0.55
PKP1-202ENST00000352845 CCDC134Q9H6E4 229 aa11.62□□□□□ -0.55
PKP1-202ENST00000352845 FAM217BQ9NTX9 383 aaPredicted RBP11.62□□□□□ -0.55
PKP1-202ENST00000352845 RBM12Q9NTZ6 932 aaKnown RBP11.62□□□□□ -0.55
PKP1-202ENST00000352845 CTTNBP2NLQ9P2B4 639 aa11.62□□□□□ -0.55
PKP1-202ENST00000352845 NUTM2BA6NNL0 878 aaPredicted RBP11.61□□□□□ -0.55
PKP1-202ENST00000352845 NUTM2EB1AL46 878 aaPredicted RBP11.61□□□□□ -0.55
PKP1-202ENST00000352845 KCNJ18B7U540 433 aa11.61□□□□□ -0.55
PKP1-202ENST00000352845 IGF2BP3O00425 579 aaKnown RBP eCLIP11.61□□□□□ -0.55
PKP1-202ENST00000352845 ATP6V1G1O75348 118 aa11.61□□□□□ -0.55
PKP1-202ENST00000352845 RARAP10276 462 aa11.61□□□□□ -0.55
PKP1-202ENST00000352845 CD44P16070 742 aaKnown RBP11.61□□□□□ -0.55
PKP1-202ENST00000352845 CTNNA1P35221 906 aaKnown RBP11.61□□□□□ -0.55
PKP1-202ENST00000352845 HSD17B3P37058 310 aa11.61□□□□□ -0.55
PKP1-202ENST00000352845 TOB1P50616 345 aaPredicted RBP11.61□□□□□ -0.55
PKP1-202ENST00000352845 KCNJ2P63252 427 aa11.61□□□□□ -0.55
PKP1-202ENST00000352845 KCNJ12Q14500 433 aa11.61□□□□□ -0.55
PKP1-202ENST00000352845 GALNTL6Q49A17 601 aa11.61□□□□□ -0.55
PKP1-202ENST00000352845 TRIM68Q6AZZ1 485 aa11.61□□□□□ -0.55
PKP1-202ENST00000352845 TBC1D10CQ8IV04 446 aa11.61□□□□□ -0.55
PKP1-202ENST00000352845 RNF168Q8IYW5 571 aaPredicted RBP11.61□□□□□ -0.55
PKP1-202ENST00000352845 SPICE1Q8N0Z3 855 aa11.61□□□□□ -0.55
PKP1-202ENST00000352845 KLHL29Q96CT2 875 aa11.61□□□□□ -0.55
PKP1-202ENST00000352845 VPS16Q9H269 839 aa11.61□□□□□ -0.55
PKP1-202ENST00000352845 RANBP17Q9H2T7 1088 aaKnown RBP11.61□□□□□ -0.55
PKP1-202ENST00000352845 SH2D4AQ9H788 454 aa11.61□□□□□ -0.55
PKP1-202ENST00000352845 ECT2Q9H8V3 914 aa11.61□□□□□ -0.55
PKP1-202ENST00000352845 NHEJ1Q9H9Q4 299 aaPredicted RBP11.61□□□□□ -0.55
PKP1-202ENST00000352845 AATFQ9NY61 560 aaKnown RBP eCLIP11.61□□□□□ -0.55
PKP1-202ENST00000352845 FBXO2Q9UK22 296 aaPredicted RBP11.61□□□□□ -0.55
PKP1-202ENST00000352845 WDR37Q9Y2I8 494 aa11.61□□□□□ -0.55
PKP1-202ENST00000352845 RCCD1A6NED2 376 aa11.6□□□□□ -0.55
PKP1-202ENST00000352845 NBPF26B4DH59 902 aa11.6□□□□□ -0.55
PKP1-202ENST00000352845 CTNND1O60716 968 aaKnown RBP11.6□□□□□ -0.55
PKP1-202ENST00000352845 CIAO1O76071 339 aa11.6□□□□□ -0.55
PKP1-202ENST00000352845 SKIV2L2P42285 1042 aaKnown RBP11.6□□□□□ -0.55
PKP1-202ENST00000352845 EIF3BP55884 814 aaKnown RBP11.6□□□□□ -0.55
PKP1-202ENST00000352845 COPS2P61201 443 aa11.6□□□□□ -0.55
PKP1-202ENST00000352845 FAM133BQ5BKY9 247 aaKnown RBP11.6□□□□□ -0.55
PKP1-202ENST00000352845 RALYLQ86SE5 291 aaKnown RBP11.6□□□□□ -0.55
PKP1-202ENST00000352845 KIAA0825Q8IV33 1275 aa11.6□□□□□ -0.55
PKP1-202ENST00000352845 GRAMD1CQ8IYS0 662 aa11.6□□□□□ -0.55
PKP1-202ENST00000352845 SYCP3Q8IZU3 236 aa11.6□□□□□ -0.55
PKP1-202ENST00000352845 MB21D1Q8N884 522 aa11.6□□□□□ -0.55
PKP1-202ENST00000352845 CASKIN2Q8WXE0 1202 aa11.6□□□□□ -0.55
PKP1-202ENST00000352845 APPBP2Q92624 585 aa11.6□□□□□ -0.55
PKP1-202ENST00000352845 ISCUQ9H1K1 167 aa11.6□□□□□ -0.55
PKP1-202ENST00000352845 GALNT8Q9NY28 637 aa11.6□□□□□ -0.55
PKP1-202ENST00000352845 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.6□□□□□ -0.55
PKP1-202ENST00000352845 SCOCQ9UIL1 159 aa11.6□□□□□ -0.55
PKP1-202ENST00000352845 ANGEL1Q9UNK9 670 aaKnown RBP11.6□□□□□ -0.55
PKP1-202ENST00000352845 RBM47A0AV96 593 aaKnown RBP11.6□□□□□ -0.55
PKP1-202ENST00000352845 LGALS16A8MUM7 142 aa11.6□□□□□ -0.55
PKP1-202ENST00000352845 CCDC166P0CW27 439 aa11.6□□□□□ -0.55
PKP1-202ENST00000352845 METAP2P50579 478 aaKnown RBP eCLIP11.6□□□□□ -0.55
PKP1-202ENST00000352845 SCNN1BP51168 640 aa11.6□□□□□ -0.55
PKP1-202ENST00000352845 TNNC1P63316 161 aa11.6□□□□□ -0.55
PKP1-202ENST00000352845 SPDYCQ5MJ68 293 aa11.6□□□□□ -0.55
PKP1-202ENST00000352845 APOA5Q6Q788 366 aa11.6□□□□□ -0.55
PKP1-202ENST00000352845 PI16Q6UXB8 463 aa11.6□□□□□ -0.55
PKP1-202ENST00000352845 TOM1L2Q6ZVM7 507 aa11.6□□□□□ -0.55
PKP1-202ENST00000352845 SH3RF1Q7Z6J0 888 aa11.6□□□□□ -0.55
PKP1-202ENST00000352845 IFNL2Q8IZJ0 200 aa11.6□□□□□ -0.55
PKP1-202ENST00000352845 FAM163AQ96GL9 167 aaPredicted RBP11.6□□□□□ -0.55
PKP1-202ENST00000352845 NDNQ99608 321 aa11.6□□□□□ -0.55
PKP1-202ENST00000352845 CCDC28BQ9BUN5 200 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms