RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 GJA10Q969M2 543 aa24.55■■□□□ 1.52
UPF3A-201ENST00000351487 EDEM3Q9BZQ6 932 aa24.55■■□□□ 1.52
UPF3A-201ENST00000351487 GBP3Q9H0R5 595 aa24.55■■□□□ 1.52
UPF3A-201ENST00000351487 PANK4Q9NVE7 773 aa24.55■■□□□ 1.52
UPF3A-201ENST00000351487 ARHGAP20Q9P2F6 1191 aa24.55■■□□□ 1.52
UPF3A-201ENST00000351487 PI4KBQ9UBF8 816 aa24.55■■□□□ 1.52
UPF3A-201ENST00000351487 HDAC6Q9UBN7 1215 aa24.55■■□□□ 1.52
UPF3A-201ENST00000351487 ATAD5Q96QE3 1844 aa24.55■■□□□ 1.52
UPF3A-201ENST00000351487 USP17L15C9J2P7 530 aa24.55■■□□□ 1.52
UPF3A-201ENST00000351487 USP17L13C9JLJ4 530 aa24.55■■□□□ 1.52
UPF3A-201ENST00000351487 USP17L11C9JVI0 530 aa24.55■■□□□ 1.52
UPF3A-201ENST00000351487 USP17L18D6R9N7 530 aa24.55■■□□□ 1.52
UPF3A-201ENST00000351487 USP17L22D6RA61 530 aa24.55■■□□□ 1.52
UPF3A-201ENST00000351487 USP17L17D6RBQ6 530 aa24.55■■□□□ 1.52
UPF3A-201ENST00000351487 USP17L19D6RCP7 530 aa24.55■■□□□ 1.52
UPF3A-201ENST00000351487 USP17L20D6RJB6 530 aa24.55■■□□□ 1.52
UPF3A-201ENST00000351487 RHOXF2BP0C7M4 288 aa24.55■■□□□ 1.52
UPF3A-201ENST00000351487 OAS2P29728 719 aaKnown RBP24.55■■□□□ 1.52
UPF3A-201ENST00000351487 FKBP3Q00688 224 aaKnown RBP24.55■■□□□ 1.52
UPF3A-201ENST00000351487 USP17L24Q0WX57 530 aa24.55■■□□□ 1.52
UPF3A-201ENST00000351487 KIF5AQ12840 1032 aa24.55■■□□□ 1.52
UPF3A-201ENST00000351487 SPA17Q15506 151 aa24.55■■□□□ 1.52
UPF3A-201ENST00000351487 CDC37Q16543 378 aaPredicted RBP24.55■■□□□ 1.52
UPF3A-201ENST00000351487 WDR93Q6P2C0 686 aa24.55■■□□□ 1.52
UPF3A-201ENST00000351487 USP17L6PQ6QN14 398 aa24.55■■□□□ 1.52
UPF3A-201ENST00000351487 RPGRIP1Q96KN7 1286 aa24.55■■□□□ 1.52
UPF3A-201ENST00000351487 RHOXF2Q9BQY4 288 aa24.55■■□□□ 1.52
UPF3A-201ENST00000351487 FAM207AQ9NSI2 230 aaPredicted RBP24.55■■□□□ 1.52
UPF3A-201ENST00000351487 BMP2KQ9NSY1 1161 aaPredicted RBP24.55■■□□□ 1.52
UPF3A-201ENST00000351487 VSNL1P62760 191 aa24.54■■□□□ 1.52
UPF3A-201ENST00000351487 LRRC41Q15345 812 aa24.54■■□□□ 1.52
UPF3A-201ENST00000351487 CERKLQ49MI3 558 aaPredicted RBP24.54■■□□□ 1.52
UPF3A-201ENST00000351487 SLFN13Q68D06 897 aa24.54■■□□□ 1.52
UPF3A-201ENST00000351487 TATDN1Q6P1N9 297 aa24.54■■□□□ 1.52
UPF3A-201ENST00000351487 CRYGNQ8WXF5 182 aa24.54■■□□□ 1.52
UPF3A-201ENST00000351487 PKNOX2Q96KN3 472 aa24.54■■□□□ 1.52
UPF3A-201ENST00000351487 DBNDD1Q9H9R9 158 aa24.54■■□□□ 1.52
UPF3A-201ENST00000351487 FAM198AQ9UFP1 575 aa24.54■■□□□ 1.52
UPF3A-201ENST00000351487 L1RE1Q9UN81 338 aa24.54■■□□□ 1.52
UPF3A-201ENST00000351487 DDTLA6NHG4 134 aaPredicted RBP24.54■■□□□ 1.52
UPF3A-201ENST00000351487 CYP27A1Q02318 531 aa24.54■■□□□ 1.52
UPF3A-201ENST00000351487 STRIP1Q5VSL9 837 aa24.54■■□□□ 1.52
UPF3A-201ENST00000351487 HDXQ7Z353 690 aa24.54■■□□□ 1.52
UPF3A-201ENST00000351487 C2CD5Q86YS7 1000 aa24.54■■□□□ 1.52
UPF3A-201ENST00000351487 BAP1Q92560 729 aa24.54■■□□□ 1.52
UPF3A-201ENST00000351487 AKT1S1Q96B36 256 aa24.54■■□□□ 1.52
UPF3A-201ENST00000351487 PCDHA2Q9Y5H9 948 aa24.54■■□□□ 1.52
UPF3A-201ENST00000351487 PLEKP08567 350 aaPredicted RBP24.53■■□□□ 1.52
UPF3A-201ENST00000351487 CKAP4Q07065 602 aaKnown RBP24.53■■□□□ 1.52
UPF3A-201ENST00000351487 MCTP2Q6DN12 878 aa24.53■■□□□ 1.52
UPF3A-201ENST00000351487 CEP63Q96MT8 703 aa24.53■■□□□ 1.52
UPF3A-201ENST00000351487 MMRN2Q9H8L6 949 aa24.53■■□□□ 1.52
UPF3A-201ENST00000351487 COL4A3BPQ9Y5P4 624 aa24.53■■□□□ 1.52
UPF3A-201ENST00000351487 CCDC65Q8IXS2 484 aa24.53■■□□□ 1.52
UPF3A-201ENST00000351487 SLFN12Q8IYM2 578 aa24.53■■□□□ 1.52
UPF3A-201ENST00000351487 SECISBP2LQ93073 1101 aaKnown RBP24.53■■□□□ 1.52
UPF3A-201ENST00000351487 ABCB6Q9NP58 842 aa24.53■■□□□ 1.52
UPF3A-201ENST00000351487 KCNQ5Q9NR82 932 aa24.53■■□□□ 1.52
UPF3A-201ENST00000351487 KIAA1024Q9UPX6 916 aa24.53■■□□□ 1.52
UPF3A-201ENST00000351487 FAM196BA6NMK8 535 aa24.52■■□□□ 1.52
UPF3A-201ENST00000351487 MEIS2O14770 477 aa24.52■■□□□ 1.52
UPF3A-201ENST00000351487 PLA2G4BP0C869 781 aa24.52■■□□□ 1.52
UPF3A-201ENST00000351487 KIF11P52732 1056 aa24.52■■□□□ 1.52
UPF3A-201ENST00000351487 CACNB3P54284 484 aa24.52■■□□□ 1.52
UPF3A-201ENST00000351487 DACT2Q5SW24 774 aa24.52■■□□□ 1.52
UPF3A-201ENST00000351487 SH3BP5LQ7L8J4 393 aa24.52■■□□□ 1.52
UPF3A-201ENST00000351487 SIAH1Q8IUQ4 282 aa24.52■■□□□ 1.52
UPF3A-201ENST00000351487 KIAA0825Q8IV33 1275 aa24.52■■□□□ 1.52
UPF3A-201ENST00000351487 LRRC53A6NM62 1247 aa24.51■■□□□ 1.51
UPF3A-201ENST00000351487 E9PMD0 336 aa24.51■■□□□ 1.51
UPF3A-201ENST00000351487 USO1O60763 962 aaKnown RBP24.51■■□□□ 1.51
UPF3A-201ENST00000351487 HSPA1LP34931 641 aa24.51■■□□□ 1.51
UPF3A-201ENST00000351487 MARSP56192 900 aaKnown RBP24.51■■□□□ 1.51
UPF3A-201ENST00000351487 TCP10Q12799 353 aa24.51■■□□□ 1.51
UPF3A-201ENST00000351487 SHROOM1Q2M3G4 852 aaPredicted RBP24.51■■□□□ 1.51
UPF3A-201ENST00000351487 TMEM179Q6ZVK1 233 aa24.51■■□□□ 1.51
UPF3A-201ENST00000351487 KRT26Q7Z3Y9 468 aa24.51■■□□□ 1.51
UPF3A-201ENST00000351487 MMS19Q96T76 1030 aa24.51■■□□□ 1.51
UPF3A-201ENST00000351487 IFIH1Q9BYX4 1025 aaKnown RBP24.51■■□□□ 1.51
UPF3A-201ENST00000351487 SH2D4AQ9H788 454 aa24.51■■□□□ 1.51
UPF3A-201ENST00000351487 PCDHAC2Q9Y5I4 1007 aa24.51■■□□□ 1.51
UPF3A-201ENST00000351487 DUSP10Q9Y6W6 482 aa24.51■■□□□ 1.51
UPF3A-201ENST00000351487 POTEB3A0JP26 581 aa24.51■■□□□ 1.51
UPF3A-201ENST00000351487 FRMD3A2A2Y4 597 aa24.51■■□□□ 1.51
UPF3A-201ENST00000351487 POTECB2RU33 542 aa24.51■■□□□ 1.51
UPF3A-201ENST00000351487 MMP10P09238 476 aa24.51■■□□□ 1.51
UPF3A-201ENST00000351487 CYP2C19P33261 490 aa24.51■■□□□ 1.51
UPF3A-201ENST00000351487 USP14P54578 494 aa24.51■■□□□ 1.51
UPF3A-201ENST00000351487 POTEBQ6S5H4 581 aa24.51■■□□□ 1.51
UPF3A-201ENST00000351487 GMCL1P1Q8NEA9 526 aa24.51■■□□□ 1.51
UPF3A-201ENST00000351487 TRIM58Q8NG06 486 aa24.51■■□□□ 1.51
UPF3A-201ENST00000351487 PCDHA13Q9Y5I0 950 aa24.51■■□□□ 1.51
UPF3A-201ENST00000351487 PITPNM2Q9BZ72 1349 aa24.5■■□□□ 1.51
UPF3A-201ENST00000351487 GNA14O95837 355 aa24.5■■□□□ 1.51
UPF3A-201ENST00000351487 CYP11B2P19099 503 aa24.5■■□□□ 1.51
UPF3A-201ENST00000351487 ICA1Q05084 483 aa24.5■■□□□ 1.51
UPF3A-201ENST00000351487 PDXDC1Q6P996 788 aa24.5■■□□□ 1.51
UPF3A-201ENST00000351487 ZC3H3Q8IXZ2 948 aaKnown RBP24.5■■□□□ 1.51
UPF3A-201ENST00000351487 MACROD2A1Z1Q3 448 aa24.5■■□□□ 1.51
UPF3A-201ENST00000351487 TBX3O15119 743 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms