RNA–Protein interactions for RNA: ENST00000350498.7

PDAP1-201, Transcript of PDGFA associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDAP1, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-201ENST00000350498 KRT79Q5XKE5 535 aa18.43■□□□□ 0.54
PDAP1-201ENST00000350498 CUL5Q93034 780 aa18.43■□□□□ 0.54
PDAP1-201ENST00000350498 KIAA1024Q9UPX6 916 aa18.43■□□□□ 0.54
PDAP1-201ENST00000350498 PCDHA1Q9Y5I3 950 aa18.43■□□□□ 0.54
PDAP1-201ENST00000350498 DNAJC19Q96DA6 116 aa18.43■□□□□ 0.54
PDAP1-201ENST00000350498 PSMB7Q99436 277 aa18.43■□□□□ 0.54
PDAP1-201ENST00000350498 MMRN2Q9H8L6 949 aa18.43■□□□□ 0.54
PDAP1-201ENST00000350498 PCDHA12Q9UN75 941 aa18.43■□□□□ 0.54
PDAP1-201ENST00000350498 SAR1BQ9Y6B6 198 aa18.43■□□□□ 0.54
PDAP1-201ENST00000350498 BICDL2A1A5D9 508 aa18.42■□□□□ 0.54
PDAP1-201ENST00000350498 PSMD14O00487 310 aa18.42■□□□□ 0.54
PDAP1-201ENST00000350498 SLC1A4P43007 532 aa18.42■□□□□ 0.54
PDAP1-201ENST00000350498 SPICE1Q8N0Z3 855 aa18.42■□□□□ 0.54
PDAP1-201ENST00000350498 CCDC47Q96A33 483 aaKnown RBP18.42■□□□□ 0.54
PDAP1-201ENST00000350498 JAKMIP2Q96AA8 810 aa18.42■□□□□ 0.54
PDAP1-201ENST00000350498 SMARCAL1Q9NZC9 954 aa18.42■□□□□ 0.54
PDAP1-201ENST00000350498 ARFGEF1Q9Y6D6 1849 aa18.42■□□□□ 0.54
PDAP1-201ENST00000350498 POTEB2H3BUK9 544 aa18.42■□□□□ 0.54
PDAP1-201ENST00000350498 MEIS1O00470 390 aa18.42■□□□□ 0.54
PDAP1-201ENST00000350498 HLA-DOAP06340 250 aa18.42■□□□□ 0.54
PDAP1-201ENST00000350498 C2orf54Q08AI8 447 aa18.42■□□□□ 0.54
PDAP1-201ENST00000350498 MEA1Q16626 185 aa18.42■□□□□ 0.54
PDAP1-201ENST00000350498 TMEM119Q4V9L6 283 aa18.42■□□□□ 0.54
PDAP1-201ENST00000350498 NDST4Q9H3R1 872 aa18.42■□□□□ 0.54
PDAP1-201ENST00000350498 TDRD3Q9H7E2 651 aaKnown RBP18.42■□□□□ 0.54
PDAP1-201ENST00000350498 MAGEF1Q9HAY2 307 aa18.42■□□□□ 0.54
PDAP1-201ENST00000350498 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.42■□□□□ 0.54
PDAP1-201ENST00000350498 MYO1AQ9UBC5 1043 aa18.42■□□□□ 0.54
PDAP1-201ENST00000350498 COL11A2P13942 1736 aaPredicted RBP18.41■□□□□ 0.54
PDAP1-201ENST00000350498 USP14P54578 494 aa18.41■□□□□ 0.54
PDAP1-201ENST00000350498 PSMC6P62333 389 aa18.41■□□□□ 0.54
PDAP1-201ENST00000350498 EZH2Q15910 746 aaKnown RBP18.41■□□□□ 0.54
PDAP1-201ENST00000350498 CERKLQ49MI3 558 aaPredicted RBP18.41■□□□□ 0.54
PDAP1-201ENST00000350498 VWA3BQ502W6 1294 aa18.41■□□□□ 0.54
PDAP1-201ENST00000350498 LRRC55Q6ZSA7 311 aa18.41■□□□□ 0.54
PDAP1-201ENST00000350498 C2CD5Q86YS7 1000 aa18.41■□□□□ 0.54
PDAP1-201ENST00000350498 HAUS4Q9H6D7 363 aa18.41■□□□□ 0.54
PDAP1-201ENST00000350498 FAM204AQ9H8W3 233 aa18.41■□□□□ 0.54
PDAP1-201ENST00000350498 ARHGAP20Q9P2F6 1191 aa18.41■□□□□ 0.54
PDAP1-201ENST00000350498 SWAP70Q9UH65 585 aa18.41■□□□□ 0.54
PDAP1-201ENST00000350498 FEZ2Q9UHY8 353 aaPredicted RBP18.41■□□□□ 0.54
PDAP1-201ENST00000350498 ATF5Q9Y2D1 282 aaPredicted RBP18.41■□□□□ 0.54
PDAP1-201ENST00000350498 SIPA1L1O43166 1804 aa18.41■□□□□ 0.54
PDAP1-201ENST00000350498 ACTN2P35609 894 aa18.41■□□□□ 0.54
PDAP1-201ENST00000350498 COASYQ13057 564 aa18.41■□□□□ 0.54
PDAP1-201ENST00000350498 CDC37Q16543 378 aaPredicted RBP18.41■□□□□ 0.54
PDAP1-201ENST00000350498 TSR1Q2NL82 804 aaKnown RBP18.41■□□□□ 0.54
PDAP1-201ENST00000350498 MUM1L1Q5H9M0 696 aa18.41■□□□□ 0.54
PDAP1-201ENST00000350498 SLFN13Q68D06 897 aa18.41■□□□□ 0.54
PDAP1-201ENST00000350498 HHIPL2Q6UWX4 724 aa18.41■□□□□ 0.54
PDAP1-201ENST00000350498 C10orf67Q8IYJ2 551 aa18.41■□□□□ 0.54
PDAP1-201ENST00000350498 CYP2W1Q8TAV3 490 aa18.41■□□□□ 0.54
PDAP1-201ENST00000350498 EHD2Q9NZN4 543 aa18.41■□□□□ 0.54
PDAP1-201ENST00000350498 SIK3Q9Y2K2 1263 aa18.41■□□□□ 0.54
PDAP1-201ENST00000350498 NRXN2Q9P2S2 1712 aa18.4■□□□□ 0.54
PDAP1-201ENST00000350498 POTEFA5A3E0 1075 aa18.4■□□□□ 0.54
PDAP1-201ENST00000350498 MED24O75448 989 aa18.4■□□□□ 0.54
PDAP1-201ENST00000350498 SYF2O95926 243 aaKnown RBP18.4■□□□□ 0.54
PDAP1-201ENST00000350498 POTEIP0CG38 1075 aa18.4■□□□□ 0.54
PDAP1-201ENST00000350498 HOXA13P31271 388 aaPredicted RBP18.4■□□□□ 0.54
PDAP1-201ENST00000350498 PDIA5Q14554 519 aa18.4■□□□□ 0.54
PDAP1-201ENST00000350498 FKBP15Q5T1M5 1219 aa18.4■□□□□ 0.54
PDAP1-201ENST00000350498 PPP4R3AQ6IN85 833 aa18.4■□□□□ 0.54
PDAP1-201ENST00000350498 POTEGQ6S5H5 508 aa18.4■□□□□ 0.54
PDAP1-201ENST00000350498 POTEEQ6S8J3 1075 aa18.4■□□□□ 0.54
PDAP1-201ENST00000350498 ANKRD13CQ8N6S4 541 aa18.4■□□□□ 0.54
PDAP1-201ENST00000350498 MTMR8Q96EF0 704 aa18.4■□□□□ 0.54
PDAP1-201ENST00000350498 CRACR2AQ9BSW2 395 aa18.4■□□□□ 0.54
PDAP1-201ENST00000350498 ZHX3Q9H4I2 956 aa18.4■□□□□ 0.54
PDAP1-201ENST00000350498 MEIS2O14770 477 aa18.4■□□□□ 0.54
PDAP1-201ENST00000350498 APBA3O96018 575 aa18.4■□□□□ 0.54
PDAP1-201ENST00000350498 MRPL12P52815 198 aaKnown RBP18.4■□□□□ 0.54
PDAP1-201ENST00000350498 ZBED6P86452 979 aa18.4■□□□□ 0.54
PDAP1-201ENST00000350498 EHHADHQ08426 723 aa18.4■□□□□ 0.54
PDAP1-201ENST00000350498 AOC3Q16853 763 aa18.4■□□□□ 0.54
PDAP1-201ENST00000350498 NOC3LQ8WTT2 800 aaKnown RBP18.4■□□□□ 0.54
PDAP1-201ENST00000350498 HDAC7Q8WUI4 952 aa18.4■□□□□ 0.54
PDAP1-201ENST00000350498 BBXQ8WY36 941 aaPredicted RBP18.4■□□□□ 0.54
PDAP1-201ENST00000350498 MLXIPQ9HAP2 919 aa18.4■□□□□ 0.54
PDAP1-201ENST00000350498 JADE2Q9NQC1 790 aa18.4■□□□□ 0.54
PDAP1-201ENST00000350498 STK17AQ9UEE5 414 aa18.4■□□□□ 0.54
PDAP1-201ENST00000350498 EIF3JO75822 258 aaKnown RBP18.39■□□□□ 0.53
PDAP1-201ENST00000350498 TUBB2AQ13885 445 aa18.39■□□□□ 0.53
PDAP1-201ENST00000350498 NLGN1Q8N2Q7 840 aa18.39■□□□□ 0.53
PDAP1-201ENST00000350498 ERGIC2Q96RQ1 377 aa18.39■□□□□ 0.53
PDAP1-201ENST00000350498 TUBB2BQ9BVA1 445 aa18.39■□□□□ 0.53
PDAP1-201ENST00000350498 PANK4Q9NVE7 773 aa18.39■□□□□ 0.53
PDAP1-201ENST00000350498 CAPN6Q9Y6Q1 641 aa18.39■□□□□ 0.53
PDAP1-201ENST00000350498 LRRC53A6NM62 1247 aa18.39■□□□□ 0.53
PDAP1-201ENST00000350498 ECE2O60344 883 aa18.39■□□□□ 0.53
PDAP1-201ENST00000350498 CXCR5P32302 372 aa18.39■□□□□ 0.53
PDAP1-201ENST00000350498 KCNMA1Q12791 1236 aa18.39■□□□□ 0.53
PDAP1-201ENST00000350498 DACT2Q5SW24 774 aa18.39■□□□□ 0.53
PDAP1-201ENST00000350498 WDR93Q6P2C0 686 aa18.39■□□□□ 0.53
PDAP1-201ENST00000350498 RRAGAQ7L523 313 aa18.39■□□□□ 0.53
PDAP1-201ENST00000350498 GOLGA5Q8TBA6 731 aa18.39■□□□□ 0.53
PDAP1-201ENST00000350498 CAGE1Q8TC20 777 aa18.39■□□□□ 0.53
PDAP1-201ENST00000350498 AKT1S1Q96B36 256 aa18.39■□□□□ 0.53
PDAP1-201ENST00000350498 ANO3Q9BYT9 981 aa18.39■□□□□ 0.53
PDAP1-201ENST00000350498 TANGO6Q9C0B7 1094 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms