RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 RPGRIP1Q96KN7 1286 aa13.37□□□□□ -0.27
SMAD9-201ENST00000350148 WRNIP1Q96S55 665 aa13.37□□□□□ -0.27
SMAD9-201ENST00000350148 TUBGCP2Q9BSJ2 902 aa13.37□□□□□ -0.27
SMAD9-201ENST00000350148 ARID5AQ03989 594 aa13.37□□□□□ -0.27
SMAD9-201ENST00000350148 CRY2Q49AN0 593 aa13.37□□□□□ -0.27
SMAD9-201ENST00000350148 HACE1Q8IYU2 909 aa13.37□□□□□ -0.27
SMAD9-201ENST00000350148 STAG2Q8N3U4 1231 aa13.37□□□□□ -0.27
SMAD9-201ENST00000350148 CTNNBL1Q8WYA6 563 aaPredicted RBP13.37□□□□□ -0.27
SMAD9-201ENST00000350148 GOLPH3LQ9H4A5 285 aa13.37□□□□□ -0.27
SMAD9-201ENST00000350148 SEL1LQ9UBV2 794 aa13.37□□□□□ -0.27
SMAD9-201ENST00000350148 DDR1Q08345 913 aa13.37□□□□□ -0.27
SMAD9-201ENST00000350148 RAD54LQ92698 747 aa13.37□□□□□ -0.27
SMAD9-201ENST00000350148 OGFRQ9NZT2 677 aa13.37□□□□□ -0.27
SMAD9-201ENST00000350148 USP17L15C9J2P7 530 aa13.37□□□□□ -0.27
SMAD9-201ENST00000350148 USP17L13C9JLJ4 530 aa13.37□□□□□ -0.27
SMAD9-201ENST00000350148 USP17L11C9JVI0 530 aa13.37□□□□□ -0.27
SMAD9-201ENST00000350148 USP17L18D6R9N7 530 aa13.37□□□□□ -0.27
SMAD9-201ENST00000350148 USP17L22D6RA61 530 aa13.37□□□□□ -0.27
SMAD9-201ENST00000350148 USP17L17D6RBQ6 530 aa13.37□□□□□ -0.27
SMAD9-201ENST00000350148 USP17L19D6RCP7 530 aa13.37□□□□□ -0.27
SMAD9-201ENST00000350148 USP17L20D6RJB6 530 aa13.37□□□□□ -0.27
SMAD9-201ENST00000350148 TMOD1P28289 359 aa13.37□□□□□ -0.27
SMAD9-201ENST00000350148 PSMC2P35998 433 aaKnown RBP13.37□□□□□ -0.27
SMAD9-201ENST00000350148 USP17L24Q0WX57 530 aa13.37□□□□□ -0.27
SMAD9-201ENST00000350148 KMT5BQ4FZB7 885 aa13.37□□□□□ -0.27
SMAD9-201ENST00000350148 VCPKMTQ9H867 229 aa13.37□□□□□ -0.27
SMAD9-201ENST00000350148 PPP2R3BQ9Y5P8 575 aa13.37□□□□□ -0.27
SMAD9-201ENST00000350148 LRP6O75581 1613 aa13.36□□□□□ -0.27
SMAD9-201ENST00000350148 STXBP3O00186 592 aa13.36□□□□□ -0.27
SMAD9-201ENST00000350148 P4HA1P13674 534 aa13.36□□□□□ -0.27
SMAD9-201ENST00000350148 CTNNA2P26232 953 aa13.36□□□□□ -0.27
SMAD9-201ENST00000350148 ODR4Q5SWX8 454 aa13.36□□□□□ -0.27
SMAD9-201ENST00000350148 PPP1R2P3Q6NXS1 205 aa13.36□□□□□ -0.27
SMAD9-201ENST00000350148 PARVGQ9HBI0 331 aa13.36□□□□□ -0.27
SMAD9-201ENST00000350148 CNOT7Q9UIV1 285 aaKnown RBP13.36□□□□□ -0.27
SMAD9-201ENST00000350148 PALM3A6NDB9 673 aaPredicted RBP13.36□□□□□ -0.27
SMAD9-201ENST00000350148 FKBP1CQ5VVH2 108 aa13.36□□□□□ -0.27
SMAD9-201ENST00000350148 MICALL2Q8IY33 904 aa13.36□□□□□ -0.27
SMAD9-201ENST00000350148 NSUN6Q8TEA1 469 aaKnown RBP13.36□□□□□ -0.27
SMAD9-201ENST00000350148 LSM14BQ9BX40 385 aaKnown RBP13.36□□□□□ -0.27
SMAD9-201ENST00000350148 TAF6LQ9Y6J9 622 aa13.36□□□□□ -0.27
SMAD9-201ENST00000350148 CTNND1O60716 968 aaKnown RBP13.36□□□□□ -0.27
SMAD9-201ENST00000350148 MCM6Q14566 821 aa13.36□□□□□ -0.27
SMAD9-201ENST00000350148 HAUS4Q9H6D7 363 aa13.36□□□□□ -0.27
SMAD9-201ENST00000350148 ARFGAP3Q9NP61 516 aa13.36□□□□□ -0.27
SMAD9-201ENST00000350148 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.36□□□□□ -0.27
SMAD9-201ENST00000350148 LIG4P49917 911 aa13.36□□□□□ -0.27
SMAD9-201ENST00000350148 POLGP54098 1239 aaPredicted RBP13.36□□□□□ -0.27
SMAD9-201ENST00000350148 PRPF4BQ13523 1007 aaKnown RBP13.36□□□□□ -0.27
SMAD9-201ENST00000350148 ARHGEF6Q15052 776 aa13.36□□□□□ -0.27
SMAD9-201ENST00000350148 XRRA1Q6P2D8 792 aa13.36□□□□□ -0.27
SMAD9-201ENST00000350148 SLC10A4Q96EP9 437 aa13.36□□□□□ -0.27
SMAD9-201ENST00000350148 FAM167AQ96KS9 214 aa13.36□□□□□ -0.27
SMAD9-201ENST00000350148 TIPINQ9BVW5 301 aa13.36□□□□□ -0.27
SMAD9-201ENST00000350148 MYOZ2Q9NPC6 264 aa13.36□□□□□ -0.27
SMAD9-201ENST00000350148 GJB4Q9NTQ9 266 aa13.36□□□□□ -0.27
SMAD9-201ENST00000350148 MAP3K20Q9NYL2 800 aaKnown RBP13.36□□□□□ -0.27
SMAD9-201ENST00000350148 MYO1AQ9UBC5 1043 aa13.36□□□□□ -0.27
SMAD9-201ENST00000350148 GAKO14976 1311 aa13.35□□□□□ -0.27
SMAD9-201ENST00000350148 NEBLO76041 1014 aa13.35□□□□□ -0.27
SMAD9-201ENST00000350148 IVLP07476 585 aa13.35□□□□□ -0.27
SMAD9-201ENST00000350148 MYZAPP0CAP1 466 aa13.35□□□□□ -0.27
SMAD9-201ENST00000350148 STAT1P42224 750 aa13.35□□□□□ -0.27
SMAD9-201ENST00000350148 VSTM4Q8IW00 320 aa13.35□□□□□ -0.27
SMAD9-201ENST00000350148 MTUS1Q9ULD2 1270 aa13.35□□□□□ -0.27
SMAD9-201ENST00000350148 PYCARDQ9ULZ3 195 aa13.35□□□□□ -0.27
SMAD9-201ENST00000350148 NDUFB10O96000 172 aa13.35□□□□□ -0.27
SMAD9-201ENST00000350148 GUCY1A2P33402 732 aa13.35□□□□□ -0.27
SMAD9-201ENST00000350148 LMAN1P49257 510 aa13.35□□□□□ -0.27
SMAD9-201ENST00000350148 RASA3Q14644 834 aa13.35□□□□□ -0.27
SMAD9-201ENST00000350148 SHC4Q6S5L8 630 aa13.35□□□□□ -0.27
SMAD9-201ENST00000350148 FAM83AQ86UY5 434 aa13.35□□□□□ -0.27
SMAD9-201ENST00000350148 CEP63Q96MT8 703 aa13.35□□□□□ -0.27
SMAD9-201ENST00000350148 GRIN3BO60391 1043 aa13.35□□□□□ -0.27
SMAD9-201ENST00000350148 KIF22Q14807 665 aa13.35□□□□□ -0.27
SMAD9-201ENST00000350148 FASTKD5Q7L8L6 764 aaKnown RBP13.35□□□□□ -0.27
SMAD9-201ENST00000350148 M0QZ92 97 aa13.35□□□□□ -0.27
SMAD9-201ENST00000350148 CYP4A11Q02928 519 aa13.35□□□□□ -0.27
SMAD9-201ENST00000350148 RAD51AP2Q09MP3 1159 aa13.35□□□□□ -0.27
SMAD9-201ENST00000350148 SEPT7Q16181 437 aaKnown RBP13.35□□□□□ -0.27
SMAD9-201ENST00000350148 ARMCX5Q6P1M9 558 aa13.35□□□□□ -0.27
SMAD9-201ENST00000350148 EMILIN3Q9NT22 766 aa13.35□□□□□ -0.27
SMAD9-201ENST00000350148 RNF181Q9P0P0 153 aa13.35□□□□□ -0.27
SMAD9-201ENST00000350148 ZHX2Q9Y6X8 837 aa13.35□□□□□ -0.27
SMAD9-201ENST00000350148 AFDNP55196 1824 aaKnown RBP13.35□□□□□ -0.27
SMAD9-201ENST00000350148 MOXD1Q6UVY6 613 aa13.34□□□□□ -0.27
SMAD9-201ENST00000350148 CNPY4Q8N129 248 aa13.34□□□□□ -0.27
SMAD9-201ENST00000350148 FBXO41Q8TF61 875 aa13.34□□□□□ -0.27
SMAD9-201ENST00000350148 SLC7A3Q8WY07 619 aa13.34□□□□□ -0.27
SMAD9-201ENST00000350148 IDI2Q9BXS1 227 aa13.34□□□□□ -0.27
SMAD9-201ENST00000350148 TUFT1Q9NNX1 390 aa13.34□□□□□ -0.27
SMAD9-201ENST00000350148 MAD2L2Q9UI95 211 aa13.34□□□□□ -0.27
SMAD9-201ENST00000350148 RRAGAQ7L523 313 aa13.34□□□□□ -0.27
SMAD9-201ENST00000350148 C10orf67Q8IYJ2 551 aa13.34□□□□□ -0.27
SMAD9-201ENST00000350148 GMCL1P1Q8NEA9 526 aa13.34□□□□□ -0.27
SMAD9-201ENST00000350148 FAM212AQ96EL1 285 aa13.34□□□□□ -0.27
SMAD9-201ENST00000350148 CD2APQ9Y5K6 639 aa13.34□□□□□ -0.27
SMAD9-201ENST00000350148 SCN11AQ9UI33 1791 aa13.34□□□□□ -0.27
SMAD9-201ENST00000350148 NPM3O75607 178 aaKnown RBP13.34□□□□□ -0.27
SMAD9-201ENST00000350148 STXBP2Q15833 593 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms