RNA–Protein interactions for RNA: ENST00000349460.8

EPB41-203, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best) BASIC

Gene EPB41, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-203ENST00000349460 ZNF662Q6ZS27 426 aa12□□□□□ -0.49
EPB41-203ENST00000349460 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12□□□□□ -0.49
EPB41-203ENST00000349460 CCDC65Q8IXS2 484 aa12□□□□□ -0.49
EPB41-203ENST00000349460 DUSP9Q99956 384 aaKnown RBP12□□□□□ -0.49
EPB41-203ENST00000349460 GPRC5DQ9NZD1 345 aa12□□□□□ -0.49
EPB41-203ENST00000349460 PPP1R9AQ9ULJ8 1098 aa12□□□□□ -0.49
EPB41-203ENST00000349460 PCDHA2Q9Y5H9 948 aa12□□□□□ -0.49
EPB41-203ENST00000349460 AKR1B15C9JRZ8 316 aaPredicted RBP12□□□□□ -0.49
EPB41-203ENST00000349460 PSMD10O75832 226 aa12□□□□□ -0.49
EPB41-203ENST00000349460 CDK17Q00537 523 aa12□□□□□ -0.49
EPB41-203ENST00000349460 LDHDQ86WU2 507 aa12□□□□□ -0.49
EPB41-203ENST00000349460 ERGIC2Q96RQ1 377 aa12□□□□□ -0.49
EPB41-203ENST00000349460 NUP88Q99567 741 aaPredicted RBP12□□□□□ -0.49
EPB41-203ENST00000349460 HACL1Q9UJ83 578 aa12□□□□□ -0.49
EPB41-203ENST00000349460 DYNC1I1O14576 645 aa12□□□□□ -0.49
EPB41-203ENST00000349460 MSH4O15457 936 aa12□□□□□ -0.49
EPB41-203ENST00000349460 LYPLA2O95372 231 aa12□□□□□ -0.49
EPB41-203ENST00000349460 TPM1P09493 284 aa12□□□□□ -0.49
EPB41-203ENST00000349460 CDC25AP30304 524 aa12□□□□□ -0.49
EPB41-203ENST00000349460 CCT6AP40227 531 aaKnown RBP12□□□□□ -0.49
EPB41-203ENST00000349460 ZCWPW2Q504Y3 356 aa12□□□□□ -0.49
EPB41-203ENST00000349460 RDM1Q8NG50 284 aa12□□□□□ -0.49
EPB41-203ENST00000349460 GDAQ9Y2T3 454 aa12□□□□□ -0.49
EPB41-203ENST00000349460 EYA4O95677 639 aa11.99□□□□□ -0.49
EPB41-203ENST00000349460 SLURP2P0DP57 97 aa11.99□□□□□ -0.49
EPB41-203ENST00000349460 GAP43P17677 238 aa11.99□□□□□ -0.49
EPB41-203ENST00000349460 EDRF1Q3B7T1 1238 aa11.99□□□□□ -0.49
EPB41-203ENST00000349460 PCNX4Q63HM2 1172 aa11.99□□□□□ -0.49
EPB41-203ENST00000349460 TRMT44Q8IYL2 757 aaKnown RBP11.99□□□□□ -0.49
EPB41-203ENST00000349460 KIAA0895Q8NCT3 520 aa11.99□□□□□ -0.49
EPB41-203ENST00000349460 HSD17B14Q9BPX1 270 aa11.99□□□□□ -0.49
EPB41-203ENST00000349460 TIPINQ9BVW5 301 aa11.99□□□□□ -0.49
EPB41-203ENST00000349460 SEL1LQ9UBV2 794 aa11.99□□□□□ -0.49
EPB41-203ENST00000349460 POTEMA6NI47 508 aa11.99□□□□□ -0.49
EPB41-203ENST00000349460 FAM86B1E9PN63 330 aa11.99□□□□□ -0.49
EPB41-203ENST00000349460 STAM2O75886 525 aa11.99□□□□□ -0.49
EPB41-203ENST00000349460 FAM86B2P0C5J1 330 aa11.99□□□□□ -0.49
EPB41-203ENST00000349460 CASP1P29466 404 aa11.99□□□□□ -0.49
EPB41-203ENST00000349460 PRELPP51888 382 aa11.99□□□□□ -0.49
EPB41-203ENST00000349460 MCCD1P59942 119 aaPredicted RBP11.99□□□□□ -0.49
EPB41-203ENST00000349460 PPP2R3AQ06190 1150 aa11.99□□□□□ -0.49
EPB41-203ENST00000349460 IKQ13123 557 aaPredicted RBP11.99□□□□□ -0.49
EPB41-203ENST00000349460 CEP55Q53EZ4 464 aa11.99□□□□□ -0.49
EPB41-203ENST00000349460 E4F1Q66K89 784 aaPredicted RBP11.99□□□□□ -0.49
EPB41-203ENST00000349460 CLEC4DQ8WXI8 215 aa11.99□□□□□ -0.49
EPB41-203ENST00000349460 DDX12PQ92771 950 aa11.99□□□□□ -0.49
EPB41-203ENST00000349460 UPF1Q92900 1129 aaKnown RBP eCLIP11.99□□□□□ -0.49
EPB41-203ENST00000349460 MAGEC2Q9UBF1 373 aaPredicted RBP11.99□□□□□ -0.49
EPB41-203ENST00000349460 UNCXA6NJT0 531 aa11.98□□□□□ -0.49
EPB41-203ENST00000349460 MAFGO15525 162 aa11.98□□□□□ -0.49
EPB41-203ENST00000349460 MFAP3LO75121 409 aa11.98□□□□□ -0.49
EPB41-203ENST00000349460 PLA2G4BP0C869 781 aa11.98□□□□□ -0.49
EPB41-203ENST00000349460 SPATA31C1P0DKV0 1188 aa11.98□□□□□ -0.49
EPB41-203ENST00000349460 BACE1P56817 501 aa11.98□□□□□ -0.49
EPB41-203ENST00000349460 MCM6Q14566 821 aa11.98□□□□□ -0.49
EPB41-203ENST00000349460 SUPT20HL1Q3ZLR7 823 aa11.98□□□□□ -0.49
EPB41-203ENST00000349460 OTOP1Q7RTM1 612 aa11.98□□□□□ -0.49
EPB41-203ENST00000349460 DAAM1Q9Y4D1 1078 aa11.98□□□□□ -0.49
EPB41-203ENST00000349460 PHLPP2Q6ZVD8 1323 aa11.98□□□□□ -0.49
EPB41-203ENST00000349460 MARCH6O60337 910 aa11.98□□□□□ -0.49
EPB41-203ENST00000349460 MAPTP10636 758 aaKnown RBP11.98□□□□□ -0.49
EPB41-203ENST00000349460 STK4Q13043 487 aa11.98□□□□□ -0.49
EPB41-203ENST00000349460 EPHA7Q15375 998 aa11.98□□□□□ -0.49
EPB41-203ENST00000349460 PPFIBP1Q86W92 1011 aa11.98□□□□□ -0.49
EPB41-203ENST00000349460 TMTC1Q8IUR5 882 aa11.98□□□□□ -0.49
EPB41-203ENST00000349460 RBM46Q8TBY0 533 aaKnown RBP11.98□□□□□ -0.49
EPB41-203ENST00000349460 TSG101Q99816 390 aa11.98□□□□□ -0.49
EPB41-203ENST00000349460 BAG1Q99933 345 aaPredicted RBP11.98□□□□□ -0.49
EPB41-203ENST00000349460 OLFML3Q9NRN5 406 aa11.98□□□□□ -0.49
EPB41-203ENST00000349460 DNM3Q9UQ16 869 aa11.98□□□□□ -0.49
EPB41-203ENST00000349460 BCS1LQ9Y276 419 aa11.98□□□□□ -0.49
EPB41-203ENST00000349460 UBIAD1Q9Y5Z9 338 aa11.98□□□□□ -0.49
EPB41-203ENST00000349460 SSC5DA1L4H1 1573 aa11.98□□□□□ -0.49
EPB41-203ENST00000349460 PTPRFP10586 1907 aa11.98□□□□□ -0.49
EPB41-203ENST00000349460 CYP11B2P19099 503 aa11.97□□□□□ -0.49
EPB41-203ENST00000349460 EPM2AIP1Q7L775 607 aaPredicted RBP11.97□□□□□ -0.49
EPB41-203ENST00000349460 MB21D1Q8N884 522 aa11.97□□□□□ -0.49
EPB41-203ENST00000349460 REPS2Q8NFH8 660 aa11.97□□□□□ -0.49
EPB41-203ENST00000349460 KCNN1Q92952 543 aa11.97□□□□□ -0.49
EPB41-203ENST00000349460 MXRA8Q9BRK3 442 aa11.97□□□□□ -0.49
EPB41-203ENST00000349460 EIF3DO15371 548 aaKnown RBP eCLIP11.97□□□□□ -0.49
EPB41-203ENST00000349460 ZBED4O75132 1171 aa11.97□□□□□ -0.49
EPB41-203ENST00000349460 R3HDM1Q15032 1099 aaKnown RBP11.97□□□□□ -0.49
EPB41-203ENST00000349460 ECM1Q16610 540 aa11.97□□□□□ -0.49
EPB41-203ENST00000349460 CATSPER3Q86XQ3 398 aa11.97□□□□□ -0.49
EPB41-203ENST00000349460 ZNF280CQ8ND82 737 aa11.97□□□□□ -0.49
EPB41-203ENST00000349460 DNAJC7Q99615 494 aa11.97□□□□□ -0.49
EPB41-203ENST00000349460 SENP7Q9BQF6 1050 aa11.97□□□□□ -0.49
EPB41-203ENST00000349460 NUDT12Q9BQG2 462 aa11.97□□□□□ -0.49
EPB41-203ENST00000349460 ZNF541Q9H0D2 1346 aa11.97□□□□□ -0.49
EPB41-203ENST00000349460 CTIFO43310 598 aaKnown RBP11.97□□□□□ -0.49
EPB41-203ENST00000349460 HNRNPH3P31942 346 aaKnown RBP11.97□□□□□ -0.49
EPB41-203ENST00000349460 COASYQ13057 564 aa11.97□□□□□ -0.49
EPB41-203ENST00000349460 PTPN14Q15678 1187 aa11.97□□□□□ -0.49
EPB41-203ENST00000349460 PRR16Q569H4 304 aa11.97□□□□□ -0.49
EPB41-203ENST00000349460 SMYD4Q8IYR2 804 aaPredicted RBP11.97□□□□□ -0.49
EPB41-203ENST00000349460 MYOCDQ8IZQ8 938 aa11.97□□□□□ -0.49
EPB41-203ENST00000349460 CSGALNACT2Q8N6G5 542 aa11.97□□□□□ -0.49
EPB41-203ENST00000349460 STAMQ92783 540 aa11.97□□□□□ -0.49
EPB41-203ENST00000349460 TRIM47Q96LD4 638 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms