RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 C6orf50Q9HD87 102 aa25.31■■□□□ 1.64
SNX3-202ENST00000349379 TMEM260Q9NX78 707 aa25.31■■□□□ 1.64
SNX3-202ENST00000349379 RTEL1Q9NZ71 1219 aa25.31■■□□□ 1.64
SNX3-202ENST00000349379 VPS54Q9P1Q0 977 aa25.31■■□□□ 1.64
SNX3-202ENST00000349379 UBIAD1Q9Y5Z9 338 aa25.31■■□□□ 1.64
SNX3-202ENST00000349379 ARVCFO00192 962 aa25.3■■□□□ 1.64
SNX3-202ENST00000349379 KPNA6O60684 536 aa25.3■■□□□ 1.64
SNX3-202ENST00000349379 CDKL5O76039 1030 aa25.3■■□□□ 1.64
SNX3-202ENST00000349379 CTDNEP1O95476 244 aa25.3■■□□□ 1.64
SNX3-202ENST00000349379 MMP3P08254 477 aa25.3■■□□□ 1.64
SNX3-202ENST00000349379 GNA11P29992 359 aa25.3■■□□□ 1.64
SNX3-202ENST00000349379 LAMC2Q13753 1193 aa25.3■■□□□ 1.64
SNX3-202ENST00000349379 CELF3Q5SZQ8 465 aaKnown RBP25.3■■□□□ 1.64
SNX3-202ENST00000349379 MYSM1Q5VVJ2 828 aa25.3■■□□□ 1.64
SNX3-202ENST00000349379 GTF3C6Q969F1 213 aa25.3■■□□□ 1.64
SNX3-202ENST00000349379 PRO3102Q9H379 93 aa25.3■■□□□ 1.64
SNX3-202ENST00000349379 PDLIM7Q9NR12 457 aa25.3■■□□□ 1.64
SNX3-202ENST00000349379 HOXD8P13378 290 aaPredicted RBP25.29■■□□□ 1.64
SNX3-202ENST00000349379 SYN1P17600 705 aa25.29■■□□□ 1.64
SNX3-202ENST00000349379 ITGB5P18084 799 aa25.29■■□□□ 1.64
SNX3-202ENST00000349379 SREBF1P36956 1147 aa25.29■■□□□ 1.64
SNX3-202ENST00000349379 FAM177A1Q8N128 213 aaPredicted RBP25.29■■□□□ 1.64
SNX3-202ENST00000349379 CRYGNQ8WXF5 182 aa25.29■■□□□ 1.64
SNX3-202ENST00000349379 GPRASP2Q96D09 838 aa25.29■■□□□ 1.64
SNX3-202ENST00000349379 PGBD1Q96JS3 809 aa25.29■■□□□ 1.64
SNX3-202ENST00000349379 MTG1Q9BT17 334 aaPredicted RBP25.29■■□□□ 1.64
SNX3-202ENST00000349379 SEZ6LQ9BYH1 1024 aa25.29■■□□□ 1.64
SNX3-202ENST00000349379 MROH7Q68CQ1 1323 aa25.29■■□□□ 1.64
SNX3-202ENST00000349379 GGPS1O95749 300 aa25.28■■□□□ 1.64
SNX3-202ENST00000349379 ITGA7Q13683 1181 aa25.28■■□□□ 1.64
SNX3-202ENST00000349379 MCTP2Q6DN12 878 aa25.28■■□□□ 1.64
SNX3-202ENST00000349379 NLRX1Q86UT6 975 aa25.28■■□□□ 1.64
SNX3-202ENST00000349379 DHX37Q8IY37 1157 aaKnown RBP25.28■■□□□ 1.64
SNX3-202ENST00000349379 REXO1Q8N1G1 1221 aaKnown RBP25.28■■□□□ 1.64
SNX3-202ENST00000349379 PPTC7Q8NI37 304 aa25.28■■□□□ 1.64
SNX3-202ENST00000349379 SENP7Q9BQF6 1050 aa25.28■■□□□ 1.64
SNX3-202ENST00000349379 PQBP1O60828 265 aaKnown RBP25.27■■□□□ 1.64
SNX3-202ENST00000349379 MYL3P08590 195 aa25.27■■□□□ 1.64
SNX3-202ENST00000349379 ST3GAL1Q11201 340 aa25.27■■□□□ 1.64
SNX3-202ENST00000349379 JAKMIP3Q5VZ66 844 aa25.27■■□□□ 1.64
SNX3-202ENST00000349379 FAM126BQ8IXS8 530 aa25.27■■□□□ 1.64
SNX3-202ENST00000349379 NECAB1Q8N987 351 aa25.27■■□□□ 1.64
SNX3-202ENST00000349379 VTI1AQ96AJ9 217 aa25.27■■□□□ 1.64
SNX3-202ENST00000349379 AIFM3Q96NN9 605 aa25.27■■□□□ 1.64
SNX3-202ENST00000349379 GDF15Q99988 308 aa25.27■■□□□ 1.64
SNX3-202ENST00000349379 CLTBP09497 229 aa25.26■■□□□ 1.63
SNX3-202ENST00000349379 PSMC6P62333 389 aa25.26■■□□□ 1.63
SNX3-202ENST00000349379 FAAP100Q0VG06 881 aa25.26■■□□□ 1.63
SNX3-202ENST00000349379 NEDD9Q14511 834 aa25.26■■□□□ 1.63
SNX3-202ENST00000349379 HSDL1Q3SXM5 330 aa25.26■■□□□ 1.63
SNX3-202ENST00000349379 BICD2Q8TD16 824 aa25.26■■□□□ 1.63
SNX3-202ENST00000349379 CDHR1Q96JP9 859 aa25.26■■□□□ 1.63
SNX3-202ENST00000349379 BCAS3Q9H6U6 928 aa25.26■■□□□ 1.63
SNX3-202ENST00000349379 JADE2Q9NQC1 790 aa25.26■■□□□ 1.63
SNX3-202ENST00000349379 CD4P01730 458 aa25.25■■□□□ 1.63
SNX3-202ENST00000349379 NPY5RQ15761 445 aa25.25■■□□□ 1.63
SNX3-202ENST00000349379 DGKDQ16760 1214 aa25.25■■□□□ 1.63
SNX3-202ENST00000349379 METTL7BQ6UX53 244 aa25.25■■□□□ 1.63
SNX3-202ENST00000349379 SH3RF1Q7Z6J0 888 aa25.25■■□□□ 1.63
SNX3-202ENST00000349379 MXRA8Q9BRK3 442 aa25.25■■□□□ 1.63
SNX3-202ENST00000349379 UPF2Q9HAU5 1272 aaKnown RBP25.25■■□□□ 1.63
SNX3-202ENST00000349379 LIMCH1Q9UPQ0 1083 aa25.25■■□□□ 1.63
SNX3-202ENST00000349379 TRIP12Q14669 1992 aaPredicted RBP25.24■■□□□ 1.63
SNX3-202ENST00000349379 TRIM43BA6NCK2 446 aa25.24■■□□□ 1.63
SNX3-202ENST00000349379 DCDC2CA8MYV0 355 aa25.24■■□□□ 1.63
SNX3-202ENST00000349379 KIAA0355O15063 1070 aa25.24■■□□□ 1.63
SNX3-202ENST00000349379 MAFGO15525 162 aa25.24■■□□□ 1.63
SNX3-202ENST00000349379 CYP3A4P08684 503 aa25.24■■□□□ 1.63
SNX3-202ENST00000349379 KCNA2P16389 499 aa25.24■■□□□ 1.63
SNX3-202ENST00000349379 ARHGAP4P98171 946 aa25.24■■□□□ 1.63
SNX3-202ENST00000349379 DAGLBQ8NCG7 672 aa25.24■■□□□ 1.63
SNX3-202ENST00000349379 NSUN7Q8NE18 718 aaKnown RBP25.24■■□□□ 1.63
SNX3-202ENST00000349379 RASGRP4Q8TDF6 673 aa25.24■■□□□ 1.63
SNX3-202ENST00000349379 KAT2BQ92831 832 aa25.24■■□□□ 1.63
SNX3-202ENST00000349379 TRIM43Q96BQ3 446 aaPredicted RBP25.24■■□□□ 1.63
SNX3-202ENST00000349379 SPATA33Q96N06 139 aa25.24■■□□□ 1.63
SNX3-202ENST00000349379 TBX21Q9UL17 535 aa25.24■■□□□ 1.63
SNX3-202ENST00000349379 WDR81Q562E7 1941 aa25.24■■□□□ 1.63
SNX3-202ENST00000349379 M0R2N6 131 aa25.23■■□□□ 1.63
SNX3-202ENST00000349379 ATP9AO75110 1047 aa25.23■■□□□ 1.63
SNX3-202ENST00000349379 PPFIA4O75335 1185 aa25.23■■□□□ 1.63
SNX3-202ENST00000349379 FDPSP14324 419 aaKnown RBP25.23■■□□□ 1.63
SNX3-202ENST00000349379 MAGEA10P43363 369 aaPredicted RBP25.23■■□□□ 1.63
SNX3-202ENST00000349379 NLRP5P59047 1200 aa25.23■■□□□ 1.63
SNX3-202ENST00000349379 MTMR1Q13613 665 aa25.23■■□□□ 1.63
SNX3-202ENST00000349379 RABEP1Q15276 862 aa25.23■■□□□ 1.63
SNX3-202ENST00000349379 CEP55Q53EZ4 464 aa25.23■■□□□ 1.63
SNX3-202ENST00000349379 CHRDL2Q6WN34 429 aa25.23■■□□□ 1.63
SNX3-202ENST00000349379 CYP2W1Q8TAV3 490 aa25.23■■□□□ 1.63
SNX3-202ENST00000349379 TBC1D32Q96NH3 1257 aa25.23■■□□□ 1.63
SNX3-202ENST00000349379 MLXIPQ9HAP2 919 aa25.23■■□□□ 1.63
SNX3-202ENST00000349379 PCDHA4Q9UN74 947 aa25.23■■□□□ 1.63
SNX3-202ENST00000349379 COLQQ9Y215 455 aaPredicted RBP25.23■■□□□ 1.63
SNX3-202ENST00000349379 F2P00734 622 aa25.22■■□□□ 1.63
SNX3-202ENST00000349379 BMP8BP34820 402 aa25.22■■□□□ 1.63
SNX3-202ENST00000349379 GALNT17Q6IS24 598 aa25.22■■□□□ 1.63
SNX3-202ENST00000349379 CYFIP1Q7L576 1253 aa25.22■■□□□ 1.63
SNX3-202ENST00000349379 NIPA1Q7RTP0 329 aa25.22■■□□□ 1.63
SNX3-202ENST00000349379 GIMAP8Q8ND71 665 aaPredicted RBP25.22■■□□□ 1.63
SNX3-202ENST00000349379 IL27Q8NEV9 243 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms