RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 TTI2Q6NXR4 508 aa20.57■□□□□ 0.88
SCARF1-202ENST00000348987 NBPF5PQ86XG9 351 aaPredicted RBP20.57■□□□□ 0.88
SCARF1-202ENST00000348987 CASKIN2Q8WXE0 1202 aa20.57■□□□□ 0.88
SCARF1-202ENST00000348987 CDK17Q00537 523 aa20.56■□□□□ 0.88
SCARF1-202ENST00000348987 CFAP221Q4G0U5 840 aa20.56■□□□□ 0.88
SCARF1-202ENST00000348987 NAIF1Q69YI7 327 aaPredicted RBP20.56■□□□□ 0.88
SCARF1-202ENST00000348987 MREGQ8N565 214 aa20.56■□□□□ 0.88
SCARF1-202ENST00000348987 ATP8A2Q9NTI2 1148 aa20.56■□□□□ 0.88
SCARF1-202ENST00000348987 LAMB2P55268 1798 aa20.56■□□□□ 0.88
SCARF1-202ENST00000348987 USP17L3A6NCW0 530 aa20.56■□□□□ 0.88
SCARF1-202ENST00000348987 USP17L4A6NCW7 530 aa20.56■□□□□ 0.88
SCARF1-202ENST00000348987 PSMA7O14818 248 aa20.56■□□□□ 0.88
SCARF1-202ENST00000348987 PPP1R12BO60237 982 aaPredicted RBP20.56■□□□□ 0.88
SCARF1-202ENST00000348987 TMOD1P28289 359 aa20.56■□□□□ 0.88
SCARF1-202ENST00000348987 EIF4A3P38919 411 aaKnown RBP20.56■□□□□ 0.88
SCARF1-202ENST00000348987 GRIK5Q16478 980 aa20.56■□□□□ 0.88
SCARF1-202ENST00000348987 USP17L1Q7RTZ2 530 aa20.56■□□□□ 0.88
SCARF1-202ENST00000348987 CCDC50Q8IVM0 306 aa20.56■□□□□ 0.88
SCARF1-202ENST00000348987 SLC44A5Q8NCS7 719 aa20.56■□□□□ 0.88
SCARF1-202ENST00000348987 GPR101Q96P66 508 aaPredicted RBP20.56■□□□□ 0.88
SCARF1-202ENST00000348987 TMEM60Q9H2L4 133 aa20.56■□□□□ 0.88
SCARF1-202ENST00000348987 TLDC1Q6P9B6 456 aa20.55■□□□□ 0.88
SCARF1-202ENST00000348987 BLIDQ8IZY5 108 aa20.55■□□□□ 0.88
SCARF1-202ENST00000348987 TBC1D22AQ8WUA7 517 aa20.55■□□□□ 0.88
SCARF1-202ENST00000348987 SETDB2Q96T68 719 aa20.55■□□□□ 0.88
SCARF1-202ENST00000348987 DUSP9Q99956 384 aaKnown RBP20.55■□□□□ 0.88
SCARF1-202ENST00000348987 NOC4LQ9BVI4 516 aaKnown RBP20.55■□□□□ 0.88
SCARF1-202ENST00000348987 TRIM6Q9C030 488 aaPredicted RBP20.55■□□□□ 0.88
SCARF1-202ENST00000348987 CPVLQ9H3G5 476 aa20.55■□□□□ 0.88
SCARF1-202ENST00000348987 PLAGL2Q9UPG8 496 aa20.55■□□□□ 0.88
SCARF1-202ENST00000348987 SCN7AQ01118 1682 aa20.55■□□□□ 0.88
SCARF1-202ENST00000348987 A0A1B0GUL6 1792 aa20.55■□□□□ 0.88
SCARF1-202ENST00000348987 A0A1B0GUA9 196 aa20.55■□□□□ 0.88
SCARF1-202ENST00000348987 AKR1B10O60218 316 aa20.55■□□□□ 0.88
SCARF1-202ENST00000348987 MTIF2P46199 727 aaKnown RBP20.55■□□□□ 0.88
SCARF1-202ENST00000348987 SCTRP47872 440 aa20.55■□□□□ 0.88
SCARF1-202ENST00000348987 NAALADL2Q58DX5 795 aa20.55■□□□□ 0.88
SCARF1-202ENST00000348987 KLHDC7AQ5VTJ3 777 aa20.55■□□□□ 0.88
SCARF1-202ENST00000348987 PNMA1Q8ND90 353 aa20.55■□□□□ 0.88
SCARF1-202ENST00000348987 OR2W6PQ8NHA6 318 aa20.55■□□□□ 0.88
SCARF1-202ENST00000348987 MTMR8Q96EF0 704 aa20.55■□□□□ 0.88
SCARF1-202ENST00000348987 CNOT6LQ96LI5 555 aaKnown RBP20.55■□□□□ 0.88
SCARF1-202ENST00000348987 KRT12Q99456 494 aa20.55■□□□□ 0.88
SCARF1-202ENST00000348987 PYM1Q9BRP8 204 aaKnown RBP20.55■□□□□ 0.88
SCARF1-202ENST00000348987 LEMD3Q9Y2U8 911 aa20.55■□□□□ 0.88
SCARF1-202ENST00000348987 RREB1Q92766 1687 aa20.54■□□□□ 0.88
SCARF1-202ENST00000348987 SKAP2O75563 359 aaPredicted RBP20.54■□□□□ 0.88
SCARF1-202ENST00000348987 RNASE9P60153 205 aaKnown RBP20.54■□□□□ 0.88
SCARF1-202ENST00000348987 NAA25Q14CX7 972 aa20.54■□□□□ 0.88
SCARF1-202ENST00000348987 DIXDC1Q155Q3 683 aa20.54■□□□□ 0.88
SCARF1-202ENST00000348987 LRRC15Q8TF66 581 aa20.54■□□□□ 0.88
SCARF1-202ENST00000348987 TMBIM4Q9HC24 238 aa20.54■□□□□ 0.88
SCARF1-202ENST00000348987 ARPP21Q9UBL0 812 aaPredicted RBP20.54■□□□□ 0.88
SCARF1-202ENST00000348987 GOLGA6L10A6NI86 522 aa20.54■□□□□ 0.88
SCARF1-202ENST00000348987 CYTH3O43739 400 aa20.54■□□□□ 0.88
SCARF1-202ENST00000348987 RTN2O75298 545 aa20.54■□□□□ 0.88
SCARF1-202ENST00000348987 TRAPPC10P48553 1259 aa20.54■□□□□ 0.88
SCARF1-202ENST00000348987 MIIPQ5JXC2 388 aa20.54■□□□□ 0.88
SCARF1-202ENST00000348987 SLC10A5Q5PT55 438 aa20.54■□□□□ 0.88
SCARF1-202ENST00000348987 MAGEC3Q8TD91 643 aa20.54■□□□□ 0.88
SCARF1-202ENST00000348987 SEC16BQ96JE7 1060 aa20.54■□□□□ 0.88
SCARF1-202ENST00000348987 NLRP3Q96P20 1036 aa20.54■□□□□ 0.88
SCARF1-202ENST00000348987 SRRM3A6NNA2 597 aaPredicted RBP20.53■□□□□ 0.88
SCARF1-202ENST00000348987 EPHB6O15197 1021 aa20.53■□□□□ 0.88
SCARF1-202ENST00000348987 MAGEA1P43355 309 aa20.53■□□□□ 0.88
SCARF1-202ENST00000348987 RASSF7Q02833 373 aa20.53■□□□□ 0.88
SCARF1-202ENST00000348987 FMNL3Q8IVF7 1028 aa20.53■□□□□ 0.88
SCARF1-202ENST00000348987 ATP6V0A4Q9HBG4 840 aa20.53■□□□□ 0.88
SCARF1-202ENST00000348987 FAM207AQ9NSI2 230 aaPredicted RBP20.53■□□□□ 0.88
SCARF1-202ENST00000348987 CCNL1Q9UK58 526 aaPredicted RBP20.53■□□□□ 0.88
SCARF1-202ENST00000348987 TRAPPC3O43617 180 aa20.53■□□□□ 0.88
SCARF1-202ENST00000348987 ERCC3P19447 782 aa20.53■□□□□ 0.88
SCARF1-202ENST00000348987 GBP2P32456 591 aaPredicted RBP20.53■□□□□ 0.88
SCARF1-202ENST00000348987 SBK1Q52WX2 424 aa20.53■□□□□ 0.88
SCARF1-202ENST00000348987 DZIP1Q86YF9 867 aaKnown RBP20.53■□□□□ 0.88
SCARF1-202ENST00000348987 ARFGAP2Q8N6H7 521 aa20.53■□□□□ 0.88
SCARF1-202ENST00000348987 C1orf131Q8NDD1 294 aaKnown RBP20.53■□□□□ 0.88
SCARF1-202ENST00000348987 ARHGEF1Q92888 912 aaKnown RBP20.53■□□□□ 0.88
SCARF1-202ENST00000348987 A0A1W2PQJ5 194 aa20.52■□□□□ 0.88
SCARF1-202ENST00000348987 KLRC4O43908 158 aa20.52■□□□□ 0.88
SCARF1-202ENST00000348987 GOLGA8HP0CJ92 632 aa20.52■□□□□ 0.88
SCARF1-202ENST00000348987 CDC37Q16543 378 aaPredicted RBP20.52■□□□□ 0.88
SCARF1-202ENST00000348987 INF2Q27J81 1249 aa20.52■□□□□ 0.88
SCARF1-202ENST00000348987 ACCSLQ4AC99 568 aa20.52■□□□□ 0.88
SCARF1-202ENST00000348987 RASSF8Q8NHQ8 419 aa20.52■□□□□ 0.88
SCARF1-202ENST00000348987 SH3RF3Q8TEJ3 882 aaPredicted RBP20.52■□□□□ 0.88
SCARF1-202ENST00000348987 WHAMMQ8TF30 809 aa20.52■□□□□ 0.88
SCARF1-202ENST00000348987 TBC1D31Q96DN5 1066 aa20.52■□□□□ 0.88
SCARF1-202ENST00000348987 BCCIPQ9P287 314 aaKnown RBP eCLIP20.52■□□□□ 0.88
SCARF1-202ENST00000348987 GCOM1H8Y6P7 765 aaPredicted RBP20.52■□□□□ 0.87
SCARF1-202ENST00000348987 MYZAPP0CAP1 466 aa20.52■□□□□ 0.87
SCARF1-202ENST00000348987 SLC8A1P32418 973 aa20.52■□□□□ 0.87
SCARF1-202ENST00000348987 BYSLQ13895 437 aaKnown RBP20.52■□□□□ 0.87
SCARF1-202ENST00000348987 ANKRD40Q6AI12 368 aa20.52■□□□□ 0.87
SCARF1-202ENST00000348987 GIMAP8Q8ND71 665 aaPredicted RBP20.52■□□□□ 0.87
SCARF1-202ENST00000348987 SLC12A6Q9UHW9 1150 aa20.52■□□□□ 0.87
SCARF1-202ENST00000348987 PCDHA4Q9UN74 947 aa20.52■□□□□ 0.87
SCARF1-202ENST00000348987 KIF5BP33176 963 aa20.51■□□□□ 0.87
SCARF1-202ENST00000348987 GFPT1Q06210 699 aaPredicted RBP20.51■□□□□ 0.87
SCARF1-202ENST00000348987 C12orf60Q5U649 245 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms