RNA–Protein interactions for RNA: ENST00000347615.6

SMG7-201, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMG7, Length 5,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-201ENST00000347615 USP17L6PQ6QN14 398 aa11.44□□□□□ -0.58
SMG7-201ENST00000347615 PPFIBP2Q8ND30 876 aa11.44□□□□□ -0.58
SMG7-201ENST00000347615 COX16Q9P0S2 106 aa11.44□□□□□ -0.58
SMG7-201ENST00000347615 GCKP35557 465 aa11.43□□□□□ -0.58
SMG7-201ENST00000347615 ANTXR2P58335 489 aa11.43□□□□□ -0.58
SMG7-201ENST00000347615 SMAD1Q15797 465 aaKnown RBP11.43□□□□□ -0.58
SMG7-201ENST00000347615 SNCBQ16143 134 aa11.43□□□□□ -0.58
SMG7-201ENST00000347615 ANKRD7Q92527 254 aa11.43□□□□□ -0.58
SMG7-201ENST00000347615 DDX12PQ92771 950 aa11.43□□□□□ -0.58
SMG7-201ENST00000347615 PPP1R16BQ96T49 567 aa11.43□□□□□ -0.58
SMG7-201ENST00000347615 NAP1L4Q99733 375 aaKnown RBP11.43□□□□□ -0.58
SMG7-201ENST00000347615 AGPAT5Q9NUQ2 364 aa11.43□□□□□ -0.58
SMG7-201ENST00000347615 SAT1P21673 171 aa11.43□□□□□ -0.58
SMG7-201ENST00000347615 RAD9BQ6WBX8 426 aa11.43□□□□□ -0.58
SMG7-201ENST00000347615 TMTC3Q6ZXV5 915 aa11.43□□□□□ -0.58
SMG7-201ENST00000347615 NUCKS1Q9H1E3 243 aaKnown RBP11.43□□□□□ -0.58
SMG7-201ENST00000347615 EHD2Q9NZN4 543 aa11.43□□□□□ -0.58
SMG7-201ENST00000347615 TADA3O75528 432 aa11.43□□□□□ -0.58
SMG7-201ENST00000347615 AFPP02771 609 aaKnown RBP11.43□□□□□ -0.58
SMG7-201ENST00000347615 ERFP50548 548 aa11.43□□□□□ -0.58
SMG7-201ENST00000347615 KCTD19Q17RG1 926 aaPredicted RBP11.43□□□□□ -0.58
SMG7-201ENST00000347615 TEKT1Q969V4 418 aa11.43□□□□□ -0.58
SMG7-201ENST00000347615 PLCB1Q9NQ66 1216 aa11.43□□□□□ -0.58
SMG7-201ENST00000347615 CIB2O75838 187 aa11.43□□□□□ -0.58
SMG7-201ENST00000347615 PLA2G4BP0C869 781 aa11.43□□□□□ -0.58
SMG7-201ENST00000347615 TMED2Q15363 201 aa11.43□□□□□ -0.58
SMG7-201ENST00000347615 CLEC10AQ8IUN9 316 aa11.43□□□□□ -0.58
SMG7-201ENST00000347615 PALM2Q8IXS6 379 aa11.43□□□□□ -0.58
SMG7-201ENST00000347615 ZNF148Q9UQR1 794 aa11.43□□□□□ -0.58
SMG7-201ENST00000347615 FGGP02679 453 aa11.43□□□□□ -0.58
SMG7-201ENST00000347615 GUCY1A3Q02108 690 aa11.43□□□□□ -0.58
SMG7-201ENST00000347615 GEN1Q17RS7 908 aa11.43□□□□□ -0.58
SMG7-201ENST00000347615 MIGA2Q7L4E1 593 aa11.43□□□□□ -0.58
SMG7-201ENST00000347615 CELF1Q92879 486 aaKnown RBP11.43□□□□□ -0.58
SMG7-201ENST00000347615 THAP9Q9H5L6 903 aa11.43□□□□□ -0.58
SMG7-201ENST00000347615 KLHL14Q9P2G3 628 aa11.43□□□□□ -0.58
SMG7-201ENST00000347615 TFRCP02786 760 aaKnown RBP11.42□□□□□ -0.58
SMG7-201ENST00000347615 COL9A3Q14050 684 aaPredicted RBP11.42□□□□□ -0.58
SMG7-201ENST00000347615 CLUL1Q15846 466 aa11.42□□□□□ -0.58
SMG7-201ENST00000347615 TBC1D1Q86TI0 1168 aaPredicted RBP11.42□□□□□ -0.58
SMG7-201ENST00000347615 FBXO2Q9UK22 296 aaPredicted RBP11.42□□□□□ -0.58
SMG7-201ENST00000347615 DAAM1Q9Y4D1 1078 aa11.42□□□□□ -0.58
SMG7-201ENST00000347615 HECW2Q9P2P5 1572 aa11.42□□□□□ -0.58
SMG7-201ENST00000347615 LMTK3Q96Q04 1460 aa11.42□□□□□ -0.58
SMG7-201ENST00000347615 CA8P35219 290 aa11.42□□□□□ -0.58
SMG7-201ENST00000347615 PDE6CP51160 858 aa11.42□□□□□ -0.58
SMG7-201ENST00000347615 MUM1Q2TAK8 710 aa11.42□□□□□ -0.58
SMG7-201ENST00000347615 LRCH2Q5VUJ6 765 aa11.42□□□□□ -0.58
SMG7-201ENST00000347615 FAM186BQ8IYM0 893 aa11.42□□□□□ -0.58
SMG7-201ENST00000347615 STAG1Q8WVM7 1258 aa11.42□□□□□ -0.58
SMG7-201ENST00000347615 FERMT1Q9BQL6 677 aa11.42□□□□□ -0.58
SMG7-201ENST00000347615 LRRC1Q9BTT6 524 aa11.42□□□□□ -0.58
SMG7-201ENST00000347615 DDX47Q9H0S4 455 aaKnown RBP11.42□□□□□ -0.58
SMG7-201ENST00000347615 SNX24Q9Y343 169 aa11.42□□□□□ -0.58
SMG7-201ENST00000347615 ATP8B1O43520 1251 aa11.42□□□□□ -0.58
SMG7-201ENST00000347615 CDK8P49336 464 aa11.42□□□□□ -0.58
SMG7-201ENST00000347615 LARGE2Q8N3Y3 721 aa11.42□□□□□ -0.58
SMG7-201ENST00000347615 METTL13Q8N6R0 699 aa11.42□□□□□ -0.58
SMG7-201ENST00000347615 ARHGAP42A6NI28 874 aa11.42□□□□□ -0.58
SMG7-201ENST00000347615 FKBP3Q00688 224 aaKnown RBP11.42□□□□□ -0.58
SMG7-201ENST00000347615 ZNF746Q6NUN9 644 aaPredicted RBP11.42□□□□□ -0.58
SMG7-201ENST00000347615 GOLPH3Q9H4A6 298 aa11.42□□□□□ -0.58
SMG7-201ENST00000347615 NCOA3Q9Y6Q9 1424 aa11.42□□□□□ -0.58
SMG7-201ENST00000347615 ITIH3Q06033 890 aa11.41□□□□□ -0.58
SMG7-201ENST00000347615 LRRC14Q15048 493 aa11.41□□□□□ -0.58
SMG7-201ENST00000347615 HIBCHQ6NVY1 386 aaPredicted RBP11.41□□□□□ -0.58
SMG7-201ENST00000347615 CCDC62Q6P9F0 684 aa11.41□□□□□ -0.58
SMG7-201ENST00000347615 ZNF449Q6P9G9 518 aa11.41□□□□□ -0.58
SMG7-201ENST00000347615 RNF10Q8N5U6 811 aaKnown RBP11.41□□□□□ -0.58
SMG7-201ENST00000347615 ZNF653Q96CK0 615 aa11.41□□□□□ -0.58
SMG7-201ENST00000347615 SH2D3AQ9BRG2 576 aa11.41□□□□□ -0.58
SMG7-201ENST00000347615 TPX2Q9ULW0 747 aaKnown RBP11.41□□□□□ -0.58
SMG7-201ENST00000347615 PGRMC1O00264 195 aaKnown RBP11.41□□□□□ -0.58
SMG7-201ENST00000347615 ATF2P15336 505 aa11.41□□□□□ -0.58
SMG7-201ENST00000347615 RCN2Q14257 317 aa11.41□□□□□ -0.58
SMG7-201ENST00000347615 EFCAB13Q8IY85 973 aa11.41□□□□□ -0.58
SMG7-201ENST00000347615 SRBD1Q8N5C6 995 aaKnown RBP11.41□□□□□ -0.58
SMG7-201ENST00000347615 RSAD2Q8WXG1 361 aa11.41□□□□□ -0.58
SMG7-201ENST00000347615 POMGNT1Q8WZA1 660 aa11.41□□□□□ -0.58
SMG7-201ENST00000347615 VTI1AQ96AJ9 217 aa11.41□□□□□ -0.58
SMG7-201ENST00000347615 ELAC2Q9BQ52 826 aaKnown RBP11.41□□□□□ -0.58
SMG7-201ENST00000347615 BHMT2Q9H2M3 363 aa11.41□□□□□ -0.58
SMG7-201ENST00000347615 CCDC38Q502W7 563 aa11.41□□□□□ -0.58
SMG7-201ENST00000347615 ANKRD20A3Q5VUR7 823 aa11.41□□□□□ -0.58
SMG7-201ENST00000347615 NOA1Q8NC60 698 aaKnown RBP11.41□□□□□ -0.58
SMG7-201ENST00000347615 HOOK2Q96ED9 719 aa11.41□□□□□ -0.58
SMG7-201ENST00000347615 ATG3Q9NT62 314 aa11.41□□□□□ -0.58
SMG7-201ENST00000347615 SEPT10Q9P0V9 454 aa11.41□□□□□ -0.58
SMG7-201ENST00000347615 LGALS16A8MUM7 142 aa11.41□□□□□ -0.58
SMG7-201ENST00000347615 TDP2O95551 362 aa11.41□□□□□ -0.58
SMG7-201ENST00000347615 GAS8O95995 478 aa11.41□□□□□ -0.58
SMG7-201ENST00000347615 BPIFA3Q9BQP9 254 aa11.41□□□□□ -0.58
SMG7-201ENST00000347615 HEMGNQ9BXL5 484 aa11.41□□□□□ -0.58
SMG7-201ENST00000347615 POTEB3A0JP26 581 aa11.41□□□□□ -0.58
SMG7-201ENST00000347615 POTECB2RU33 542 aa11.41□□□□□ -0.58
SMG7-201ENST00000347615 IL6STP40189 918 aaPredicted RBP11.41□□□□□ -0.58
SMG7-201ENST00000347615 KIF22Q14807 665 aa11.41□□□□□ -0.58
SMG7-201ENST00000347615 ARHGEF16Q5VV41 709 aa11.41□□□□□ -0.58
SMG7-201ENST00000347615 ANKRD40Q6AI12 368 aa11.41□□□□□ -0.58
SMG7-201ENST00000347615 POTEBQ6S5H4 581 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms