RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 TRIM43BA6NCK2 446 aa18.06■□□□□ 0.48
TSPAN4-201ENST00000346501 IFNAR1P17181 557 aa18.06■□□□□ 0.48
TSPAN4-201ENST00000346501 PSMC6P62333 389 aa18.06■□□□□ 0.48
TSPAN4-201ENST00000346501 PTPN11Q06124 597 aaPredicted RBP18.06■□□□□ 0.48
TSPAN4-201ENST00000346501 SSRP1Q08945 709 aaKnown RBP18.06■□□□□ 0.48
TSPAN4-201ENST00000346501 FUT2Q10981 343 aa18.06■□□□□ 0.48
TSPAN4-201ENST00000346501 AP3B2Q13367 1082 aa18.06■□□□□ 0.48
TSPAN4-201ENST00000346501 UBE2SQ16763 222 aa18.06■□□□□ 0.48
TSPAN4-201ENST00000346501 CELF3Q5SZQ8 465 aaKnown RBP18.06■□□□□ 0.48
TSPAN4-201ENST00000346501 NFRKBQ6P4R8 1299 aa18.06■□□□□ 0.48
TSPAN4-201ENST00000346501 SH3RF1Q7Z6J0 888 aa18.06■□□□□ 0.48
TSPAN4-201ENST00000346501 TMEM199Q8N511 208 aa18.06■□□□□ 0.48
TSPAN4-201ENST00000346501 SLC43A3Q8NBI5 491 aa18.06■□□□□ 0.48
TSPAN4-201ENST00000346501 BICD2Q8TD16 824 aa18.06■□□□□ 0.48
TSPAN4-201ENST00000346501 TRIM43Q96BQ3 446 aaPredicted RBP18.06■□□□□ 0.48
TSPAN4-201ENST00000346501 SLC26A6Q9BXS9 759 aa18.06■□□□□ 0.48
TSPAN4-201ENST00000346501 STXBP3O00186 592 aa18.05■□□□□ 0.48
TSPAN4-201ENST00000346501 PPFIA4O75335 1185 aa18.05■□□□□ 0.48
TSPAN4-201ENST00000346501 CDKL5O76039 1030 aa18.05■□□□□ 0.48
TSPAN4-201ENST00000346501 TIMP1P01033 207 aa18.05■□□□□ 0.48
TSPAN4-201ENST00000346501 ICAM3P32942 547 aa18.05■□□□□ 0.48
TSPAN4-201ENST00000346501 FPGSQ05932 587 aa18.05■□□□□ 0.48
TSPAN4-201ENST00000346501 TOB2Q14106 344 aaPredicted RBP18.05■□□□□ 0.48
TSPAN4-201ENST00000346501 GPRASP2Q96D09 838 aa18.05■□□□□ 0.48
TSPAN4-201ENST00000346501 ZFP91Q96JP5 570 aaPredicted RBP18.05■□□□□ 0.48
TSPAN4-201ENST00000346501 SPATA31C2B4DYI2 1134 aa18.04■□□□□ 0.48
TSPAN4-201ENST00000346501 MAFGO15525 162 aa18.04■□□□□ 0.48
TSPAN4-201ENST00000346501 RGS20O76081 388 aa18.04■□□□□ 0.48
TSPAN4-201ENST00000346501 UBA1P22314 1058 aaKnown RBP18.04■□□□□ 0.48
TSPAN4-201ENST00000346501 ZNF76P36508 570 aa18.04■□□□□ 0.48
TSPAN4-201ENST00000346501 MRPS9P82933 396 aaKnown RBP18.04■□□□□ 0.48
TSPAN4-201ENST00000346501 NBPF20Q3BBV1 942 aa18.04■□□□□ 0.48
TSPAN4-201ENST00000346501 MYSM1Q5VVJ2 828 aa18.04■□□□□ 0.48
TSPAN4-201ENST00000346501 PHKBQ93100 1093 aa18.04■□□□□ 0.48
TSPAN4-201ENST00000346501 SENP7Q9BQF6 1050 aa18.04■□□□□ 0.48
TSPAN4-201ENST00000346501 ALDH8A1Q9H2A2 487 aaPredicted RBP18.04■□□□□ 0.48
TSPAN4-201ENST00000346501 SLKQ9H2G2 1235 aaPredicted RBP18.04■□□□□ 0.48
TSPAN4-201ENST00000346501 HIPK3Q9H422 1215 aa18.04■□□□□ 0.48
TSPAN4-201ENST00000346501 TBX21Q9UL17 535 aa18.04■□□□□ 0.48
TSPAN4-201ENST00000346501 TRIOBPQ9H2D6 2365 aa18.03■□□□□ 0.48
TSPAN4-201ENST00000346501 ESYT2A0FGR8 921 aa18.03■□□□□ 0.48
TSPAN4-201ENST00000346501 CD4P01730 458 aa18.03■□□□□ 0.48
TSPAN4-201ENST00000346501 STK3Q13188 491 aa18.03■□□□□ 0.48
TSPAN4-201ENST00000346501 PPIGQ13427 754 aaKnown RBP eCLIP18.03■□□□□ 0.483e-9■■■□□ 16.8
TSPAN4-201ENST00000346501 MTMR1Q13613 665 aa18.03■□□□□ 0.48
TSPAN4-201ENST00000346501 METTL7BQ6UX53 244 aa18.03■□□□□ 0.48
TSPAN4-201ENST00000346501 C7orf31Q8N865 590 aa18.03■□□□□ 0.48
TSPAN4-201ENST00000346501 PPP1R12CQ9BZL4 782 aa18.03■□□□□ 0.48
TSPAN4-201ENST00000346501 NCOA5Q9HCD5 579 aaKnown RBP18.03■□□□□ 0.48
TSPAN4-201ENST00000346501 SORBS3O60504 671 aa18.02■□□□□ 0.48
TSPAN4-201ENST00000346501 B4GALT4O60513 344 aa18.02■□□□□ 0.48
TSPAN4-201ENST00000346501 XBP1P17861 261 aa18.02■□□□□ 0.48
TSPAN4-201ENST00000346501 MFSD5Q6N075 450 aa18.02■□□□□ 0.48
TSPAN4-201ENST00000346501 REXO1Q8N1G1 1221 aaKnown RBP18.02■□□□□ 0.48
TSPAN4-201ENST00000346501 CCDC155Q8N6L0 562 aa18.02■□□□□ 0.48
TSPAN4-201ENST00000346501 RETREG2Q8NC44 543 aa18.02■□□□□ 0.48
TSPAN4-201ENST00000346501 ANO3Q9BYT9 981 aa18.02■□□□□ 0.48
TSPAN4-201ENST00000346501 ZMYND12Q9H0C1 365 aa18.02■□□□□ 0.48
TSPAN4-201ENST00000346501 TRPV6Q9H1D0 765 aa18.02■□□□□ 0.48
TSPAN4-201ENST00000346501 SH3GLB2Q9NR46 395 aa18.02■□□□□ 0.48
TSPAN4-201ENST00000346501 PCDH10Q9P2E7 1040 aa18.02■□□□□ 0.48
TSPAN4-201ENST00000346501 GRIN2DO15399 1336 aa18.01■□□□□ 0.47
TSPAN4-201ENST00000346501 DEXIO95424 95 aa18.01■□□□□ 0.47
TSPAN4-201ENST00000346501 PSEN2P49810 448 aa18.01■□□□□ 0.47
TSPAN4-201ENST00000346501 FXR1P51114 621 aaKnown RBP eCLIP18.01■□□□□ 0.47
TSPAN4-201ENST00000346501 NLRP5P59047 1200 aa18.01■□□□□ 0.47
TSPAN4-201ENST00000346501 HSDL1Q3SXM5 330 aa18.01■□□□□ 0.47
TSPAN4-201ENST00000346501 CYFIP1Q7L576 1253 aa18.01■□□□□ 0.47
TSPAN4-201ENST00000346501 ALG1Q9BT22 464 aa18.01■□□□□ 0.47
TSPAN4-201ENST00000346501 MTIF3Q9H2K0 278 aaKnown RBP18.01■□□□□ 0.47
TSPAN4-201ENST00000346501 UPF2Q9HAU5 1272 aaKnown RBP18.01■□□□□ 0.47
TSPAN4-201ENST00000346501 ZNF215Q9UL58 517 aaPredicted RBP18.01■□□□□ 0.47
TSPAN4-201ENST00000346501 SP2Q02086 613 aa18■□□□□ 0.47
TSPAN4-201ENST00000346501 BFSP2Q13515 415 aa18■□□□□ 0.47
TSPAN4-201ENST00000346501 MFSD10Q14728 455 aa18■□□□□ 0.47
TSPAN4-201ENST00000346501 NTRK3Q16288 839 aa18■□□□□ 0.47
TSPAN4-201ENST00000346501 LRIT3Q3SXY7 679 aa18■□□□□ 0.47
TSPAN4-201ENST00000346501 JAKMIP3Q5VZ66 844 aa18■□□□□ 0.47
TSPAN4-201ENST00000346501 TYW1BQ6NUM6 668 aa18■□□□□ 0.47
TSPAN4-201ENST00000346501 FAM177A1Q8N128 213 aaPredicted RBP18■□□□□ 0.47
TSPAN4-201ENST00000346501 SDF4Q9BRK5 362 aa18■□□□□ 0.47
TSPAN4-201ENST00000346501 LARP6Q9BRS8 491 aaKnown RBP18■□□□□ 0.47
TSPAN4-201ENST00000346501 C22orf23Q9BZE7 217 aa18■□□□□ 0.47
TSPAN4-201ENST00000346501 JADE2Q9NQC1 790 aa18■□□□□ 0.47
TSPAN4-201ENST00000346501 TCEAL9Q9UHQ7 104 aa18■□□□□ 0.47
TSPAN4-201ENST00000346501 UBIAD1Q9Y5Z9 338 aa18■□□□□ 0.47
TSPAN4-201ENST00000346501 F2P00734 622 aa17.99■□□□□ 0.47
TSPAN4-201ENST00000346501 ZNF286BP0CG31 522 aa17.99■□□□□ 0.47
TSPAN4-201ENST00000346501 SREBF1P36956 1147 aa17.99■□□□□ 0.47
TSPAN4-201ENST00000346501 NEK4P51957 841 aa17.99■□□□□ 0.47
TSPAN4-201ENST00000346501 SP4Q02446 784 aa17.99■□□□□ 0.47
TSPAN4-201ENST00000346501 PKN1Q16512 942 aa17.99■□□□□ 0.47
TSPAN4-201ENST00000346501 PTGISQ16647 500 aa17.99■□□□□ 0.47
TSPAN4-201ENST00000346501 KIAA0753Q2KHM9 967 aa17.99■□□□□ 0.47
TSPAN4-201ENST00000346501 SESTD1Q86VW0 696 aa17.99■□□□□ 0.47
TSPAN4-201ENST00000346501 RPUSD2Q8IZ73 545 aaKnown RBP17.99■□□□□ 0.47
TSPAN4-201ENST00000346501 MXRA8Q9BRK3 442 aa17.99■□□□□ 0.47
TSPAN4-201ENST00000346501 TRMT13Q9NUP7 481 aaKnown RBP17.99■□□□□ 0.47
TSPAN4-201ENST00000346501 MYH7BA7E2Y1 1941 aa17.98■□□□□ 0.47
TSPAN4-201ENST00000346501 H3BRB1 525 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms