RNA–Protein interactions for RNA: ENST00000344586.8

NKX2-3-201, Transcript of NK2 homeobox 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NKX2-3, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3-201ENST00000344586 HOXA7P31268 230 aaPredicted RBP25.57■■□□□ 1.68
NKX2-3-201ENST00000344586 EPHB4P54760 987 aa25.57■■□□□ 1.68
NKX2-3-201ENST00000344586 CACNA2D4Q7Z3S7 1137 aa25.57■■□□□ 1.68
NKX2-3-201ENST00000344586 PROM2Q8N271 834 aa25.57■■□□□ 1.68
NKX2-3-201ENST00000344586 RAB34Q9BZG1 259 aa25.57■■□□□ 1.68
NKX2-3-201ENST00000344586 ECM1Q16610 540 aa25.57■■□□□ 1.68
NKX2-3-201ENST00000344586 KRT79Q5XKE5 535 aa25.57■■□□□ 1.68
NKX2-3-201ENST00000344586 C15orf52Q6ZUT6 534 aaKnown RBP25.57■■□□□ 1.68
NKX2-3-201ENST00000344586 NOX5Q96PH1 765 aa25.57■■□□□ 1.68
NKX2-3-201ENST00000344586 RBM12Q9NTZ6 932 aaKnown RBP25.57■■□□□ 1.68
NKX2-3-201ENST00000344586 CORO7P57737 925 aa25.56■■□□□ 1.68
NKX2-3-201ENST00000344586 RHBDL3P58872 404 aa25.56■■□□□ 1.68
NKX2-3-201ENST00000344586 EMBQ6PCB8 327 aa25.56■■□□□ 1.68
NKX2-3-201ENST00000344586 TSEN2Q8NCE0 465 aaKnown RBP25.56■■□□□ 1.68
NKX2-3-201ENST00000344586 TANGO6Q9C0B7 1094 aa25.56■■□□□ 1.68
NKX2-3-201ENST00000344586 BUB1O43683 1085 aa25.56■■□□□ 1.68
NKX2-3-201ENST00000344586 NOL4O94818 638 aa25.56■■□□□ 1.68
NKX2-3-201ENST00000344586 MAGEA9P43362 315 aa25.56■■□□□ 1.68
NKX2-3-201ENST00000344586 COASYQ13057 564 aa25.56■■□□□ 1.68
NKX2-3-201ENST00000344586 ARHGAP27Q6ZUM4 889 aa25.56■■□□□ 1.68
NKX2-3-201ENST00000344586 MYOCDQ8IZQ8 938 aa25.56■■□□□ 1.68
NKX2-3-201ENST00000344586 RNF10Q8N5U6 811 aaKnown RBP25.56■■□□□ 1.68
NKX2-3-201ENST00000344586 CAVIN3Q969G5 261 aa25.56■■□□□ 1.68
NKX2-3-201ENST00000344586 DNAJC19Q96DA6 116 aa25.56■■□□□ 1.68
NKX2-3-201ENST00000344586 LRRC27Q9C0I9 530 aa25.56■■□□□ 1.68
NKX2-3-201ENST00000344586 CEP72Q9P209 647 aa25.56■■□□□ 1.68
NKX2-3-201ENST00000344586 PLIN4Q96Q06 1357 aa25.55■■□□□ 1.68
NKX2-3-201ENST00000344586 GOLGA8KD6RF30 607 aa25.55■■□□□ 1.68
NKX2-3-201ENST00000344586 TLR2O60603 784 aa25.55■■□□□ 1.68
NKX2-3-201ENST00000344586 PAFAH1B1P43034 410 aa25.55■■□□□ 1.68
NKX2-3-201ENST00000344586 TMC4Q7Z404 712 aa25.55■■□□□ 1.68
NKX2-3-201ENST00000344586 COL4A3BPQ9Y5P4 624 aa25.55■■□□□ 1.68
NKX2-3-201ENST00000344586 PPFIA1Q13136 1202 aa25.54■■□□□ 1.68
NKX2-3-201ENST00000344586 TDRD12Q587J7 1177 aaKnown RBP25.54■■□□□ 1.68
NKX2-3-201ENST00000344586 C8orf74Q6P047 294 aa25.54■■□□□ 1.68
NKX2-3-201ENST00000344586 AEBP2Q6ZN18 517 aaPredicted RBP25.54■■□□□ 1.68
NKX2-3-201ENST00000344586 NLRC4Q9NPP4 1024 aa25.54■■□□□ 1.68
NKX2-3-201ENST00000344586 IRAK1P51617 712 aa25.54■■□□□ 1.68
NKX2-3-201ENST00000344586 SYN2Q92777 582 aaPredicted RBP25.54■■□□□ 1.68
NKX2-3-201ENST00000344586 MS4A14Q96JA4 679 aa25.54■■□□□ 1.68
NKX2-3-201ENST00000344586 CD209Q9NNX6 404 aa25.54■■□□□ 1.68
NKX2-3-201ENST00000344586 TSKSQ9UJT2 592 aa25.54■■□□□ 1.68
NKX2-3-201ENST00000344586 VGLL3A8MV65 326 aa25.53■■□□□ 1.68
NKX2-3-201ENST00000344586 PLCG2P16885 1265 aa25.53■■□□□ 1.68
NKX2-3-201ENST00000344586 TNNI2P48788 182 aa25.53■■□□□ 1.68
NKX2-3-201ENST00000344586 ASPRV1Q53RT3 343 aa25.53■■□□□ 1.68
NKX2-3-201ENST00000344586 LRRC47Q8N1G4 583 aaKnown RBP25.53■■□□□ 1.68
NKX2-3-201ENST00000344586 MYH10P35580 1976 aa25.53■■□□□ 1.68
NKX2-3-201ENST00000344586 ANKRD65E5RJM6 399 aa25.52■■□□□ 1.68
NKX2-3-201ENST00000344586 EPB41P11171 864 aaKnown RBP25.52■■□□□ 1.68
NKX2-3-201ENST00000344586 GPSM2P81274 684 aa25.52■■□□□ 1.68
NKX2-3-201ENST00000344586 FKBP3Q00688 224 aaKnown RBP25.52■■□□□ 1.68
NKX2-3-201ENST00000344586 SLC9C1Q4G0N8 1177 aa25.52■■□□□ 1.68
NKX2-3-201ENST00000344586 SFMBT2Q5VUG0 894 aa25.52■■□□□ 1.68
NKX2-3-201ENST00000344586 ARHGEF1Q92888 912 aaKnown RBP25.52■■□□□ 1.68
NKX2-3-201ENST00000344586 FGFBP2Q9BYJ0 223 aa25.52■■□□□ 1.68
NKX2-3-201ENST00000344586 MTMR4Q9NYA4 1195 aa25.52■■□□□ 1.68
NKX2-3-201ENST00000344586 GRIN2DO15399 1336 aa25.52■■□□□ 1.68
NKX2-3-201ENST00000344586 SERPING1P05155 500 aa25.52■■□□□ 1.68
NKX2-3-201ENST00000344586 UBE2SQ16763 222 aa25.52■■□□□ 1.68
NKX2-3-201ENST00000344586 CCDC40Q4G0X9 1142 aa25.52■■□□□ 1.68
NKX2-3-201ENST00000344586 GLE1Q53GS7 698 aaKnown RBP25.52■■□□□ 1.68
NKX2-3-201ENST00000344586 DNAJC21Q5F1R6 531 aaKnown RBP25.52■■□□□ 1.68
NKX2-3-201ENST00000344586 FAM83BQ5T0W9 1011 aa25.52■■□□□ 1.68
NKX2-3-201ENST00000344586 PPP4R3AQ6IN85 833 aa25.52■■□□□ 1.68
NKX2-3-201ENST00000344586 HAS1Q92839 578 aa25.52■■□□□ 1.68
NKX2-3-201ENST00000344586 LSM14BQ9BX40 385 aaKnown RBP25.52■■□□□ 1.68
NKX2-3-201ENST00000344586 NUCKS1Q9H1E3 243 aaKnown RBP25.52■■□□□ 1.68
NKX2-3-201ENST00000344586 OPA1O60313 960 aa25.51■■□□□ 1.67
NKX2-3-201ENST00000344586 SNHG28P0DPA3 235 aa25.51■■□□□ 1.67
NKX2-3-201ENST00000344586 CFAP221Q4G0U5 840 aa25.51■■□□□ 1.67
NKX2-3-201ENST00000344586 TTMPQ5BVD1 217 aa25.51■■□□□ 1.67
NKX2-3-201ENST00000344586 FAM26FQ5R3K3 315 aa25.51■■□□□ 1.67
NKX2-3-201ENST00000344586 ALS2CLQ60I27 953 aa25.51■■□□□ 1.67
NKX2-3-201ENST00000344586 RTCBQ9Y3I0 505 aaKnown RBP25.51■■□□□ 1.67
NKX2-3-201ENST00000344586 TRAF5O00463 557 aa25.51■■□□□ 1.67
NKX2-3-201ENST00000344586 NNTQ13423 1086 aa25.51■■□□□ 1.67
NKX2-3-201ENST00000344586 SEPT2Q15019 361 aa25.51■■□□□ 1.67
NKX2-3-201ENST00000344586 FAM98CQ17RN3 349 aaKnown RBP25.51■■□□□ 1.67
NKX2-3-201ENST00000344586 GBP6Q6ZN66 633 aa25.51■■□□□ 1.67
NKX2-3-201ENST00000344586 GJA10Q969M2 543 aa25.51■■□□□ 1.67
NKX2-3-201ENST00000344586 CAPS2Q9BXY5 557 aa25.51■■□□□ 1.67
NKX2-3-201ENST00000344586 PANK4Q9NVE7 773 aa25.51■■□□□ 1.67
NKX2-3-201ENST00000344586 DDX25Q9UHL0 483 aaKnown RBP25.51■■□□□ 1.67
NKX2-3-201ENST00000344586 GAKO14976 1311 aa25.5■■□□□ 1.67
NKX2-3-201ENST00000344586 PPP1R11O60927 126 aaPredicted RBP25.5■■□□□ 1.67
NKX2-3-201ENST00000344586 IL1R1P14778 569 aa25.5■■□□□ 1.67
NKX2-3-201ENST00000344586 CLK2P49760 499 aaKnown RBP25.5■■□□□ 1.67
NKX2-3-201ENST00000344586 NAP1L1P55209 391 aaKnown RBP25.5■■□□□ 1.67
NKX2-3-201ENST00000344586 PPP1R18Q6NYC8 613 aa25.5■■□□□ 1.67
NKX2-3-201ENST00000344586 CEP63Q96MT8 703 aa25.5■■□□□ 1.67
NKX2-3-201ENST00000344586 GDF3Q9NR23 364 aa25.5■■□□□ 1.67
NKX2-3-201ENST00000344586 RNF14Q9UBS8 474 aa25.5■■□□□ 1.67
NKX2-3-201ENST00000344586 ATP6V0A2Q9Y487 856 aa25.5■■□□□ 1.67
NKX2-3-201ENST00000344586 FOCADQ5VW36 1801 aa25.5■■□□□ 1.67
NKX2-3-201ENST00000344586 PALMO75781 387 aa25.49■■□□□ 1.67
NKX2-3-201ENST00000344586 POLR2FP61218 127 aaKnown RBP25.49■■□□□ 1.67
NKX2-3-201ENST00000344586 APBA1Q02410 837 aa25.49■■□□□ 1.67
NKX2-3-201ENST00000344586 NAB2Q15742 525 aa25.49■■□□□ 1.67
NKX2-3-201ENST00000344586 ARL8AQ96BM9 186 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms