RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 NEDD9Q14511 834 aa18.45■□□□□ 0.54
ATG4B-201ENST00000344376 MYSM1Q5VVJ2 828 aa18.45■□□□□ 0.54
ATG4B-201ENST00000344376 RUFY3Q7L099 469 aa18.45■□□□□ 0.54
ATG4B-201ENST00000344376 NLRX1Q86UT6 975 aa18.45■□□□□ 0.54
ATG4B-201ENST00000344376 NOC4LQ9BVI4 516 aaKnown RBP18.45■□□□□ 0.54
ATG4B-201ENST00000344376 AGXT2Q9BYV1 514 aa18.45■□□□□ 0.54
ATG4B-201ENST00000344376 GLT8D2Q9H1C3 349 aa18.45■□□□□ 0.54
ATG4B-201ENST00000344376 FAM217BQ9NTX9 383 aaPredicted RBP18.45■□□□□ 0.54
ATG4B-201ENST00000344376 TRMT13Q9NUP7 481 aaKnown RBP18.45■□□□□ 0.54
ATG4B-201ENST00000344376 RTEL1Q9NZ71 1219 aa18.45■□□□□ 0.54
ATG4B-201ENST00000344376 NOD1Q9Y239 953 aa18.45■□□□□ 0.54
ATG4B-201ENST00000344376 NID2Q14112 1375 aa18.44■□□□□ 0.54
ATG4B-201ENST00000344376 EIF5BO60841 1220 aaKnown RBP18.44■□□□□ 0.54
ATG4B-201ENST00000344376 ADD1P35611 737 aaKnown RBP18.44■□□□□ 0.54
ATG4B-201ENST00000344376 ADCY7P51828 1080 aa18.44■□□□□ 0.54
ATG4B-201ENST00000344376 UBE2SQ16763 222 aa18.44■□□□□ 0.54
ATG4B-201ENST00000344376 ZSWIM6Q9HCJ5 1215 aa18.44■□□□□ 0.54
ATG4B-201ENST00000344376 SPATA31C2B4DYI2 1134 aa18.43■□□□□ 0.54
ATG4B-201ENST00000344376 SORBS3O60504 671 aa18.43■□□□□ 0.54
ATG4B-201ENST00000344376 PPFIA4O75335 1185 aa18.43■□□□□ 0.54
ATG4B-201ENST00000344376 CSF2RAP15509 400 aa18.43■□□□□ 0.54
ATG4B-201ENST00000344376 EPHB4P54760 987 aa18.43■□□□□ 0.54
ATG4B-201ENST00000344376 AKAP17AQ02040 695 aaKnown RBP18.43■□□□□ 0.54
ATG4B-201ENST00000344376 PSRC1Q6PGN9 363 aaPredicted RBP18.43■□□□□ 0.54
ATG4B-201ENST00000344376 CDHR1Q96JP9 859 aa18.43■□□□□ 0.54
ATG4B-201ENST00000344376 TM6SF1Q9BZW5 370 aa18.43■□□□□ 0.54
ATG4B-201ENST00000344376 RIC8AQ9NPQ8 531 aa18.43■□□□□ 0.54
ATG4B-201ENST00000344376 BARHL2Q9NY43 387 aa18.43■□□□□ 0.54
ATG4B-201ENST00000344376 SCN10AQ9Y5Y9 1956 aa18.43■□□□□ 0.54
ATG4B-201ENST00000344376 STXBP3O00186 592 aa18.42■□□□□ 0.54
ATG4B-201ENST00000344376 NOP56O00567 594 aaKnown RBP18.42■□□□□ 0.54
ATG4B-201ENST00000344376 SP2Q02086 613 aa18.42■□□□□ 0.54
ATG4B-201ENST00000344376 KAT2BQ92831 832 aa18.42■□□□□ 0.54
ATG4B-201ENST00000344376 PCDHA6Q9UN73 950 aa18.42■□□□□ 0.54
ATG4B-201ENST00000344376 PCDHA8Q9Y5H6 950 aa18.42■□□□□ 0.54
ATG4B-201ENST00000344376 F2P00734 622 aa18.42■□□□□ 0.54
ATG4B-201ENST00000344376 FOSP01100 380 aaPredicted RBP18.42■□□□□ 0.54
ATG4B-201ENST00000344376 ZNF286BP0CG31 522 aa18.42■□□□□ 0.54
ATG4B-201ENST00000344376 CYP2C9P11712 490 aa18.42■□□□□ 0.54
ATG4B-201ENST00000344376 HOXD8P13378 290 aaPredicted RBP18.42■□□□□ 0.54
ATG4B-201ENST00000344376 PSEN2P49810 448 aa18.42■□□□□ 0.54
ATG4B-201ENST00000344376 MFSD10Q14728 455 aa18.42■□□□□ 0.54
ATG4B-201ENST00000344376 PFKFB3Q16875 520 aaPredicted RBP18.42■□□□□ 0.54
ATG4B-201ENST00000344376 HSDL1Q3SXM5 330 aa18.42■□□□□ 0.54
ATG4B-201ENST00000344376 METTL7BQ6UX53 244 aa18.42■□□□□ 0.54
ATG4B-201ENST00000344376 SESTD1Q86VW0 696 aa18.42■□□□□ 0.54
ATG4B-201ENST00000344376 CCDC155Q8N6L0 562 aa18.42■□□□□ 0.54
ATG4B-201ENST00000344376 C7orf31Q8N865 590 aa18.42■□□□□ 0.54
ATG4B-201ENST00000344376 GIMAP8Q8ND71 665 aaPredicted RBP18.42■□□□□ 0.54
ATG4B-201ENST00000344376 CCDC12Q8WUD4 166 aaPredicted RBP18.42■□□□□ 0.54
ATG4B-201ENST00000344376 GPRASP2Q96D09 838 aa18.42■□□□□ 0.54
ATG4B-201ENST00000344376 IL23AQ9NPF7 189 aa18.42■□□□□ 0.54
ATG4B-201ENST00000344376 SMCO2A6NFE2 343 aa18.41■□□□□ 0.54
ATG4B-201ENST00000344376 SCG2P13521 617 aa18.41■□□□□ 0.54
ATG4B-201ENST00000344376 CCL23P55773 120 aa18.41■□□□□ 0.54
ATG4B-201ENST00000344376 KIAA0753Q2KHM9 967 aa18.41■□□□□ 0.54
ATG4B-201ENST00000344376 PPP1R13LQ8WUF5 828 aa18.41■□□□□ 0.54
ATG4B-201ENST00000344376 SENP7Q9BQF6 1050 aa18.41■□□□□ 0.54
ATG4B-201ENST00000344376 ALG1Q9BT22 464 aa18.41■□□□□ 0.54
ATG4B-201ENST00000344376 MTIF3Q9H2K0 278 aaKnown RBP18.41■□□□□ 0.54
ATG4B-201ENST00000344376 UMODL1Q5DID0 1318 aa18.41■□□□□ 0.54
ATG4B-201ENST00000344376 LAMA3Q16787 3333 aa18.4■□□□□ 0.54
ATG4B-201ENST00000344376 EVCP57679 992 aa18.4■□□□□ 0.54
ATG4B-201ENST00000344376 AP3B2Q13367 1082 aa18.4■□□□□ 0.54
ATG4B-201ENST00000344376 BFSP2Q13515 415 aa18.4■□□□□ 0.54
ATG4B-201ENST00000344376 PTGISQ16647 500 aa18.4■□□□□ 0.54
ATG4B-201ENST00000344376 TYW1BQ6NUM6 668 aa18.4■□□□□ 0.54
ATG4B-201ENST00000344376 CYFIP1Q7L576 1253 aa18.4■□□□□ 0.54
ATG4B-201ENST00000344376 RPUSD2Q8IZ73 545 aaKnown RBP18.4■□□□□ 0.54
ATG4B-201ENST00000344376 RETREG2Q8NC44 543 aa18.4■□□□□ 0.54
ATG4B-201ENST00000344376 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.4■□□□□ 0.546e-7■□□□□ 10.7
ATG4B-201ENST00000344376 UPF3BQ9BZI7 483 aaKnown RBP18.4■□□□□ 0.54
ATG4B-201ENST00000344376 PRPF3O43395 683 aaKnown RBP18.39■□□□□ 0.53
ATG4B-201ENST00000344376 PDIA3P30101 505 aaKnown RBP18.39■□□□□ 0.53
ATG4B-201ENST00000344376 SMAD3P84022 425 aaKnown RBP18.39■□□□□ 0.53
ATG4B-201ENST00000344376 SEMA3FQ13275 785 aa18.39■□□□□ 0.53
ATG4B-201ENST00000344376 MTMR1Q13613 665 aa18.39■□□□□ 0.53
ATG4B-201ENST00000344376 TMEM240Q5SV17 173 aa18.39■□□□□ 0.53
ATG4B-201ENST00000344376 DEFB123Q8N688 67 aa18.39■□□□□ 0.53
ATG4B-201ENST00000344376 WNT8AQ9H1J5 351 aa18.39■□□□□ 0.53
ATG4B-201ENST00000344376 PDRG1Q9NUG6 133 aa18.39■□□□□ 0.53
ATG4B-201ENST00000344376 HAS3O00219 553 aa18.38■□□□□ 0.53
ATG4B-201ENST00000344376 PITPNM1O00562 1244 aa18.38■□□□□ 0.53
ATG4B-201ENST00000344376 MAFGO15525 162 aa18.38■□□□□ 0.53
ATG4B-201ENST00000344376 ACRP10323 421 aa18.38■□□□□ 0.53
ATG4B-201ENST00000344376 CCT2P78371 535 aaKnown RBP18.38■□□□□ 0.53
ATG4B-201ENST00000344376 TOB2Q14106 344 aaPredicted RBP18.38■□□□□ 0.53
ATG4B-201ENST00000344376 PHKBQ93100 1093 aa18.38■□□□□ 0.53
ATG4B-201ENST00000344376 RNF26Q9BY78 433 aaPredicted RBP18.38■□□□□ 0.53
ATG4B-201ENST00000344376 ANO3Q9BYT9 981 aa18.38■□□□□ 0.53
ATG4B-201ENST00000344376 C6orf50Q9HD87 102 aa18.38■□□□□ 0.53
ATG4B-201ENST00000344376 GTF2IRD1Q9UHL9 959 aa18.38■□□□□ 0.53
ATG4B-201ENST00000344376 UBIAD1Q9Y5Z9 338 aa18.38■□□□□ 0.53
ATG4B-201ENST00000344376 ESYT2A0FGR8 921 aa18.38■□□□□ 0.53
ATG4B-201ENST00000344376 LGALS2P05162 132 aa18.38■□□□□ 0.53
ATG4B-201ENST00000344376 PFKMP08237 780 aa18.38■□□□□ 0.53
ATG4B-201ENST00000344376 IFNAR1P17181 557 aa18.38■□□□□ 0.53
ATG4B-201ENST00000344376 ITGB5P18084 799 aa18.38■□□□□ 0.53
ATG4B-201ENST00000344376 RFC2P35250 354 aa18.38■□□□□ 0.53
ATG4B-201ENST00000344376 ANAPC15P60006 121 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms