RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 WNT8AQ9H1J5 351 aa20.74■□□□□ 0.91
USF2-202ENST00000343550 MTIF3Q9H2K0 278 aaKnown RBP20.74■□□□□ 0.91
USF2-202ENST00000343550 TRMT13Q9NUP7 481 aaKnown RBP20.74■□□□□ 0.91
USF2-202ENST00000343550 CXXC1Q9P0U4 656 aaPredicted RBP20.74■□□□□ 0.91
USF2-202ENST00000343550 A6NJR5 290 aa20.73■□□□□ 0.91
USF2-202ENST00000343550 KPNA6O60684 536 aa20.73■□□□□ 0.91
USF2-202ENST00000343550 TTLL4Q14679 1199 aa20.73■□□□□ 0.91
USF2-202ENST00000343550 NTRK3Q16288 839 aa20.73■□□□□ 0.91
USF2-202ENST00000343550 ARHGEF16Q5VV41 709 aa20.73■□□□□ 0.91
USF2-202ENST00000343550 COPS5Q92905 334 aa20.73■□□□□ 0.91
USF2-202ENST00000343550 PXMP2Q9NR77 195 aa20.73■□□□□ 0.91
USF2-202ENST00000343550 OTOP2Q7RTS6 562 aa20.73■□□□□ 0.91
USF2-202ENST00000343550 RPUSD2Q8IZ73 545 aaKnown RBP20.73■□□□□ 0.91
USF2-202ENST00000343550 NCOA5Q9HCD5 579 aaKnown RBP20.73■□□□□ 0.91
USF2-202ENST00000343550 MEIS2O14770 477 aa20.72■□□□□ 0.91
USF2-202ENST00000343550 CYP2C9P11712 490 aa20.72■□□□□ 0.91
USF2-202ENST00000343550 NBPF20Q3BBV1 942 aa20.72■□□□□ 0.91
USF2-202ENST00000343550 HEATR3Q7Z4Q2 680 aa20.72■□□□□ 0.91
USF2-202ENST00000343550 FCHSD1Q86WN1 690 aa20.72■□□□□ 0.91
USF2-202ENST00000343550 GPKOWQ92917 476 aaPredicted RBP eCLIP20.72■□□□□ 0.91
USF2-202ENST00000343550 PSTPIP2Q9H939 334 aa20.72■□□□□ 0.91
USF2-202ENST00000343550 PIK3CDO00329 1044 aa20.71■□□□□ 0.91
USF2-202ENST00000343550 PRPF3O43395 683 aaKnown RBP20.71■□□□□ 0.91
USF2-202ENST00000343550 ARIH2O95376 493 aa20.71■□□□□ 0.91
USF2-202ENST00000343550 NR3C2P08235 984 aa20.71■□□□□ 0.91
USF2-202ENST00000343550 EIF2AK2P19525 551 aaKnown RBP20.71■□□□□ 0.91
USF2-202ENST00000343550 STXBP2Q15833 593 aa20.71■□□□□ 0.91
USF2-202ENST00000343550 FAM47CQ5HY64 1035 aa20.71■□□□□ 0.91
USF2-202ENST00000343550 WWC2Q6AWC2 1192 aa20.71■□□□□ 0.91
USF2-202ENST00000343550 NFRKBQ6P4R8 1299 aa20.71■□□□□ 0.91
USF2-202ENST00000343550 USP17L6PQ6QN14 398 aa20.71■□□□□ 0.91
USF2-202ENST00000343550 SCLYQ96I15 445 aa20.71■□□□□ 0.91
USF2-202ENST00000343550 MSRAQ9UJ68 235 aa20.71■□□□□ 0.91
USF2-202ENST00000343550 VCANP13611 3396 aa20.7■□□□□ 0.9
USF2-202ENST00000343550 IFNAR1P17181 557 aa20.7■□□□□ 0.9
USF2-202ENST00000343550 NEK4P51957 841 aa20.7■□□□□ 0.9
USF2-202ENST00000343550 AK2P54819 239 aa20.7■□□□□ 0.9
USF2-202ENST00000343550 ANKRD1Q15327 319 aa20.7■□□□□ 0.9
USF2-202ENST00000343550 RAB30Q15771 203 aa20.7■□□□□ 0.9
USF2-202ENST00000343550 CCDC62Q6P9F0 684 aa20.7■□□□□ 0.9
USF2-202ENST00000343550 PHKBQ93100 1093 aa20.7■□□□□ 0.9
USF2-202ENST00000343550 VWCEQ96DN2 955 aa20.7■□□□□ 0.9
USF2-202ENST00000343550 PDCD2LQ9BRP1 358 aa20.7■□□□□ 0.9
USF2-202ENST00000343550 TPCN1Q9ULQ1 816 aa20.7■□□□□ 0.9
USF2-202ENST00000343550 STK3Q13188 491 aa20.69■□□□□ 0.9
USF2-202ENST00000343550 PKN1Q16512 942 aa20.69■□□□□ 0.9
USF2-202ENST00000343550 PFKFB3Q16875 520 aaPredicted RBP20.69■□□□□ 0.9
USF2-202ENST00000343550 TYW1BQ6NUM6 668 aa20.69■□□□□ 0.9
USF2-202ENST00000343550 SEPT14Q6ZU15 432 aa20.69■□□□□ 0.9
USF2-202ENST00000343550 VSIG10LQ86VR7 867 aa20.69■□□□□ 0.9
USF2-202ENST00000343550 SMARCC2Q8TAQ2 1214 aa20.69■□□□□ 0.9
USF2-202ENST00000343550 CUL5Q93034 780 aa20.69■□□□□ 0.9
USF2-202ENST00000343550 KIF2CQ99661 725 aa20.69■□□□□ 0.9
USF2-202ENST00000343550 C22orf23Q9BZE7 217 aa20.69■□□□□ 0.9
USF2-202ENST00000343550 BARHL2Q9NY43 387 aa20.69■□□□□ 0.9
USF2-202ENST00000343550 CUL9Q8IWT3 2517 aa20.69■□□□□ 0.9
USF2-202ENST00000343550 hCG_1984214I3L0E3 225 aa20.68■□□□□ 0.9
USF2-202ENST00000343550 STXBP3O00186 592 aa20.68■□□□□ 0.9
USF2-202ENST00000343550 EIF3JO75822 258 aaKnown RBP20.68■□□□□ 0.9
USF2-202ENST00000343550 PGM5Q15124 567 aa20.68■□□□□ 0.9
USF2-202ENST00000343550 LY6KQ17RY6 165 aa20.68■□□□□ 0.9
USF2-202ENST00000343550 ZNF713Q8N859 430 aaPredicted RBP20.68■□□□□ 0.9
USF2-202ENST00000343550 PPP1R13LQ8WUF5 828 aa20.68■□□□□ 0.9
USF2-202ENST00000343550 SLC4A7Q9Y6M7 1214 aa20.68■□□□□ 0.9
USF2-202ENST00000343550 PPFIA3O75145 1194 aa20.68■□□□□ 0.9
USF2-202ENST00000343550 PFKMP08237 780 aa20.68■□□□□ 0.9
USF2-202ENST00000343550 SCG2P13521 617 aa20.68■□□□□ 0.9
USF2-202ENST00000343550 RBM25P49756 843 aaKnown RBP20.68■□□□□ 0.9
USF2-202ENST00000343550 NAPAP54920 295 aa20.68■□□□□ 0.9
USF2-202ENST00000343550 PTPN11Q06124 597 aaPredicted RBP20.68■□□□□ 0.9
USF2-202ENST00000343550 AFG1LQ8WV93 481 aa20.68■□□□□ 0.9
USF2-202ENST00000343550 RNF26Q9BY78 433 aaPredicted RBP20.68■□□□□ 0.9
USF2-202ENST00000343550 GH1P01241 217 aa20.67■□□□□ 0.9
USF2-202ENST00000343550 MYCLP12524 364 aaPredicted RBP20.67■□□□□ 0.9
USF2-202ENST00000343550 AKAP17AQ02040 695 aaKnown RBP20.67■□□□□ 0.9
USF2-202ENST00000343550 IL31RAQ8NI17 732 aa20.67■□□□□ 0.9
USF2-202ENST00000343550 GAS2L1Q99501 681 aaPredicted RBP20.67■□□□□ 0.9
USF2-202ENST00000343550 SLC26A6Q9BXS9 759 aa20.67■□□□□ 0.9
USF2-202ENST00000343550 SLKQ9H2G2 1235 aaPredicted RBP20.67■□□□□ 0.9
USF2-202ENST00000343550 PRDM12Q9H4Q4 367 aa20.67■□□□□ 0.9
USF2-202ENST00000343550 SLC28A3Q9HAS3 691 aa20.67■□□□□ 0.9
USF2-202ENST00000343550 RIC8AQ9NPQ8 531 aa20.67■□□□□ 0.9
USF2-202ENST00000343550 SCN10AQ9Y5Y9 1956 aa20.66■□□□□ 0.9
USF2-202ENST00000343550 SMCO2A6NFE2 343 aa20.66■□□□□ 0.9
USF2-202ENST00000343550 CPLX1O14810 134 aa20.66■□□□□ 0.9
USF2-202ENST00000343550 PFKFB2O60825 505 aa20.66■□□□□ 0.9
USF2-202ENST00000343550 CHMP4BP1P59074 171 aa20.66■□□□□ 0.9
USF2-202ENST00000343550 ARHGAP1Q07960 439 aa20.66■□□□□ 0.9
USF2-202ENST00000343550 SCRN1Q12765 414 aa20.66■□□□□ 0.9
USF2-202ENST00000343550 PPP1R18Q6NYC8 613 aa20.66■□□□□ 0.9
USF2-202ENST00000343550 DEFB128Q7Z7B8 93 aa20.66■□□□□ 0.9
USF2-202ENST00000343550 NKX2-4Q9H2Z4 354 aa20.66■□□□□ 0.9
USF2-202ENST00000343550 YBX2Q9Y2T7 364 aaKnown RBP20.66■□□□□ 0.9
USF2-202ENST00000343550 FRMPD4Q14CM0 1322 aa20.65■□□□□ 0.9
USF2-202ENST00000343550 ZBBXA8MT70 800 aa20.65■□□□□ 0.9
USF2-202ENST00000343550 PITPNM1O00562 1244 aa20.65■□□□□ 0.9
USF2-202ENST00000343550 RGS20O76081 388 aa20.65■□□□□ 0.9
USF2-202ENST00000343550 MMP3P08254 477 aa20.65■□□□□ 0.9
USF2-202ENST00000343550 RABGGTBP53611 331 aa20.65■□□□□ 0.9
USF2-202ENST00000343550 SSRP1Q08945 709 aaKnown RBP20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms