RNA–Protein interactions for RNA: ENST00000342084.8

PTPRR-202, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRR, Length 2,037 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-202ENST00000342084 ADAMTSL1Q8N6G6 1762 aa8.06□□□□□ -1.12
PTPRR-202ENST00000342084 FAM170AA1A519 330 aa8.06□□□□□ -1.12
PTPRR-202ENST00000342084 USP17L10C9JJH3 530 aa8.06□□□□□ -1.12
PTPRR-202ENST00000342084 AGPSO00116 658 aa8.06□□□□□ -1.12
PTPRR-202ENST00000342084 MPHOSPH10O00566 681 aaKnown RBP8.06□□□□□ -1.12
PTPRR-202ENST00000342084 MARCH6O60337 910 aa8.06□□□□□ -1.12
PTPRR-202ENST00000342084 TACC1O75410 805 aa8.06□□□□□ -1.12
PTPRR-202ENST00000342084 MAGEA1P43355 309 aa8.06□□□□□ -1.12
PTPRR-202ENST00000342084 SCNN1DP51172 638 aa8.06□□□□□ -1.12
PTPRR-202ENST00000342084 SNAP25P60880 206 aa8.06□□□□□ -1.12
PTPRR-202ENST00000342084 TUBB4BP68371 445 aa8.06□□□□□ -1.12
PTPRR-202ENST00000342084 COASYQ13057 564 aa8.06□□□□□ -1.12
PTPRR-202ENST00000342084 TMEM119Q4V9L6 283 aa8.06□□□□□ -1.12
PTPRR-202ENST00000342084 TDRD12Q587J7 1177 aaKnown RBP8.06□□□□□ -1.12
PTPRR-202ENST00000342084 FIGNQ5HY92 759 aa8.06□□□□□ -1.12
PTPRR-202ENST00000342084 KRT79Q5XKE5 535 aa8.06□□□□□ -1.12
PTPRR-202ENST00000342084 PDXDC1Q6P996 788 aa8.06□□□□□ -1.12
PTPRR-202ENST00000342084 LRRC31Q6UY01 552 aa8.06□□□□□ -1.12
PTPRR-202ENST00000342084 LEKR1Q6ZMV7 388 aa8.06□□□□□ -1.12
PTPRR-202ENST00000342084 SND1Q7KZF4 910 aaKnown RBP eCLIP8.06□□□□□ -1.12
PTPRR-202ENST00000342084 CACNA2D4Q7Z3S7 1137 aa8.06□□□□□ -1.12
PTPRR-202ENST00000342084 GUF1Q8N442 669 aaKnown RBP8.06□□□□□ -1.12
PTPRR-202ENST00000342084 TBC1D16Q8TBP0 767 aa8.06□□□□□ -1.12
PTPRR-202ENST00000342084 HAS1Q92839 578 aa8.06□□□□□ -1.12
PTPRR-202ENST00000342084 DNAJC19Q96DA6 116 aa8.06□□□□□ -1.12
PTPRR-202ENST00000342084 OSBPL9Q96SU4 736 aa8.06□□□□□ -1.12
PTPRR-202ENST00000342084 LSM14BQ9BX40 385 aaKnown RBP8.06□□□□□ -1.12
PTPRR-202ENST00000342084 RABEP2Q9H5N1 569 aa8.06□□□□□ -1.12
PTPRR-202ENST00000342084 LRRC4BQ9NT99 713 aa8.06□□□□□ -1.12
PTPRR-202ENST00000342084 STK17AQ9UEE5 414 aa8.06□□□□□ -1.12
PTPRR-202ENST00000342084 TAF1LQ8IZX4 1826 aa8.06□□□□□ -1.12
PTPRR-202ENST00000342084 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.05□□□□□ -1.12
PTPRR-202ENST00000342084 ESYT2A0FGR8 921 aa8.05□□□□□ -1.12
PTPRR-202ENST00000342084 POTEB3A0JP26 581 aa8.05□□□□□ -1.12
PTPRR-202ENST00000342084 ANO9A1A5B4 782 aa8.05□□□□□ -1.12
PTPRR-202ENST00000342084 POTECB2RU33 542 aa8.05□□□□□ -1.12
PTPRR-202ENST00000342084 USP17L15C9J2P7 530 aa8.05□□□□□ -1.12
PTPRR-202ENST00000342084 USP17L13C9JLJ4 530 aa8.05□□□□□ -1.12
PTPRR-202ENST00000342084 USP17L11C9JVI0 530 aa8.05□□□□□ -1.12
PTPRR-202ENST00000342084 USP17L18D6R9N7 530 aa8.05□□□□□ -1.12
PTPRR-202ENST00000342084 USP17L22D6RA61 530 aa8.05□□□□□ -1.12
PTPRR-202ENST00000342084 USP17L17D6RBQ6 530 aa8.05□□□□□ -1.12
PTPRR-202ENST00000342084 USP17L19D6RCP7 530 aa8.05□□□□□ -1.12
PTPRR-202ENST00000342084 USP17L20D6RJB6 530 aa8.05□□□□□ -1.12
PTPRR-202ENST00000342084 TRAF5O00463 557 aa8.05□□□□□ -1.12
PTPRR-202ENST00000342084 TLR2O60603 784 aa8.05□□□□□ -1.12
PTPRR-202ENST00000342084 USO1O60763 962 aaKnown RBP8.05□□□□□ -1.12
PTPRR-202ENST00000342084 IL1R1P14778 569 aa8.05□□□□□ -1.12
PTPRR-202ENST00000342084 NAP1L1P55209 391 aaKnown RBP8.05□□□□□ -1.12
PTPRR-202ENST00000342084 CDK17Q00537 523 aa8.05□□□□□ -1.12
PTPRR-202ENST00000342084 USP17L24Q0WX57 530 aa8.05□□□□□ -1.12
PTPRR-202ENST00000342084 PTPROQ16827 1216 aa8.05□□□□□ -1.12
PTPRR-202ENST00000342084 CCDC40Q4G0X9 1142 aa8.05□□□□□ -1.12
PTPRR-202ENST00000342084 HGSNATQ68CP4 663 aa8.05□□□□□ -1.12
PTPRR-202ENST00000342084 USP17L6PQ6QN14 398 aa8.05□□□□□ -1.12
PTPRR-202ENST00000342084 POTEBQ6S5H4 581 aa8.05□□□□□ -1.12
PTPRR-202ENST00000342084 C10orf67Q8IYJ2 551 aa8.05□□□□□ -1.12
PTPRR-202ENST00000342084 MYOCDQ8IZQ8 938 aa8.05□□□□□ -1.12
PTPRR-202ENST00000342084 FNBP4Q8N3X1 1017 aaPredicted RBP8.05□□□□□ -1.12
PTPRR-202ENST00000342084 SPATA4Q8NEY3 305 aa8.05□□□□□ -1.12
PTPRR-202ENST00000342084 TRIM58Q8NG06 486 aa8.05□□□□□ -1.12
PTPRR-202ENST00000342084 AFAP1L1Q8TED9 768 aa8.05□□□□□ -1.12
PTPRR-202ENST00000342084 TSGA10Q9BZW7 698 aa8.05□□□□□ -1.12
PTPRR-202ENST00000342084 EHD4Q9H223 541 aa8.05□□□□□ -1.12
PTPRR-202ENST00000342084 ZHX3Q9H4I2 956 aa8.05□□□□□ -1.12
PTPRR-202ENST00000342084 POLD4Q9HCU8 107 aa8.05□□□□□ -1.12
PTPRR-202ENST00000342084 PANK4Q9NVE7 773 aa8.05□□□□□ -1.12
PTPRR-202ENST00000342084 TMEM51Q9NW97 253 aa8.05□□□□□ -1.12
PTPRR-202ENST00000342084 FEZ2Q9UHY8 353 aaPredicted RBP8.05□□□□□ -1.12
PTPRR-202ENST00000342084 PACSIN2Q9UNF0 486 aaPredicted RBP8.05□□□□□ -1.12
PTPRR-202ENST00000342084 JRKLQ9Y4A0 524 aa8.05□□□□□ -1.12
PTPRR-202ENST00000342084 GAKO14976 1311 aa8.05□□□□□ -1.12
PTPRR-202ENST00000342084 PVALEFA0A1B0GWK0 134 aa8.05□□□□□ -1.12
PTPRR-202ENST00000342084 TARSL2A2RTX5 802 aaKnown RBP8.05□□□□□ -1.12
PTPRR-202ENST00000342084 ZSCAN5CA6NGD5 496 aaPredicted RBP8.05□□□□□ -1.12
PTPRR-202ENST00000342084 NOL4O94818 638 aa8.05□□□□□ -1.12
PTPRR-202ENST00000342084 FTCDO95954 541 aa8.05□□□□□ -1.12
PTPRR-202ENST00000342084 ATP2B4P23634 1241 aa8.05□□□□□ -1.12
PTPRR-202ENST00000342084 HNRNPH3P31942 346 aaKnown RBP8.05□□□□□ -1.12
PTPRR-202ENST00000342084 PPP1R2P41236 205 aa8.05□□□□□ -1.12
PTPRR-202ENST00000342084 AARSP49588 968 aaKnown RBP eCLIP8.05□□□□□ -1.12
PTPRR-202ENST00000342084 CACNB3P54284 484 aa8.05□□□□□ -1.12
PTPRR-202ENST00000342084 RNASE9P60153 205 aaKnown RBP8.05□□□□□ -1.12
PTPRR-202ENST00000342084 POLR2FP61218 127 aaKnown RBP8.05□□□□□ -1.12
PTPRR-202ENST00000342084 EHHADHQ08426 723 aa8.05□□□□□ -1.12
PTPRR-202ENST00000342084 ZNF543Q08ER8 600 aa8.05□□□□□ -1.12
PTPRR-202ENST00000342084 DOK7Q18PE1 504 aa8.05□□□□□ -1.12
PTPRR-202ENST00000342084 COBLL1Q53SF7 1204 aa8.05□□□□□ -1.12
PTPRR-202ENST00000342084 HAUS3Q68CZ6 603 aa8.05□□□□□ -1.12
PTPRR-202ENST00000342084 TTC19Q6DKK2 380 aaPredicted RBP8.05□□□□□ -1.12
PTPRR-202ENST00000342084 ZFPM1Q8IX07 1006 aa8.05□□□□□ -1.12
PTPRR-202ENST00000342084 CERS5Q8N5B7 392 aa8.05□□□□□ -1.12
PTPRR-202ENST00000342084 MSL3Q8N5Y2 521 aaKnown RBP8.05□□□□□ -1.12
PTPRR-202ENST00000342084 TSEN2Q8NCE0 465 aaKnown RBP8.05□□□□□ -1.12
PTPRR-202ENST00000342084 AENQ8WTP8 325 aaKnown RBP8.05□□□□□ -1.12
PTPRR-202ENST00000342084 PACSIN1Q9BY11 444 aa8.05□□□□□ -1.12
PTPRR-202ENST00000342084 ACBD3Q9H3P7 528 aa8.05□□□□□ -1.12
PTPRR-202ENST00000342084 MED4Q9NPJ6 270 aa8.05□□□□□ -1.12
PTPRR-202ENST00000342084 RBM12Q9NTZ6 932 aaKnown RBP8.05□□□□□ -1.12
PTPRR-202ENST00000342084 KIAA1024Q9UPX6 916 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms