RNA–Protein interactions for RNA: ENST00000341529.7

CDH5-201, Transcript of cadherin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH5, Length 4,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-201ENST00000341529 ANO3Q9BYT9 981 aa13.12□□□□□ -0.31
CDH5-201ENST00000341529 GLT8D2Q9H1C3 349 aa13.12□□□□□ -0.31
CDH5-201ENST00000341529 AMFRQ9UKV5 643 aa13.12□□□□□ -0.31
CDH5-201ENST00000341529 PNPLA7Q6ZV29 1317 aa13.12□□□□□ -0.31
CDH5-201ENST00000341529 PXDNLA1KZ92 1463 aa13.12□□□□□ -0.31
CDH5-201ENST00000341529 CCDC151A5D8V7 595 aa13.12□□□□□ -0.31
CDH5-201ENST00000341529 LRRC53A6NM62 1247 aa13.12□□□□□ -0.31
CDH5-201ENST00000341529 ZNF185O15231 689 aa13.12□□□□□ -0.31
CDH5-201ENST00000341529 KRT19P08727 400 aa13.12□□□□□ -0.31
CDH5-201ENST00000341529 BMP3P12645 472 aa13.12□□□□□ -0.31
CDH5-201ENST00000341529 TROAPQ12815 778 aa13.12□□□□□ -0.31
CDH5-201ENST00000341529 ANKRD40Q6AI12 368 aa13.12□□□□□ -0.31
CDH5-201ENST00000341529 EEPD1Q7L9B9 569 aa13.12□□□□□ -0.31
CDH5-201ENST00000341529 GIMAP7Q8NHV1 300 aa13.12□□□□□ -0.31
CDH5-201ENST00000341529 AK8Q96MA6 479 aa13.12□□□□□ -0.31
CDH5-201ENST00000341529 PICK1Q9NRD5 415 aa13.12□□□□□ -0.31
CDH5-201ENST00000341529 IKBKGQ9Y6K9 419 aa13.12□□□□□ -0.31
CDH5-201ENST00000341529 LGALS16A8MUM7 142 aa13.12□□□□□ -0.31
CDH5-201ENST00000341529 VEGFAP15692 232 aaPredicted RBP13.12□□□□□ -0.31
CDH5-201ENST00000341529 PRPHP41219 470 aa13.12□□□□□ -0.31
CDH5-201ENST00000341529 WDR44Q5JSH3 913 aa13.12□□□□□ -0.31
CDH5-201ENST00000341529 ARFGAP2Q8N6H7 521 aa13.12□□□□□ -0.31
CDH5-201ENST00000341529 ANKRD42Q8N9B4 389 aa13.12□□□□□ -0.31
CDH5-201ENST00000341529 TUBE1Q9UJT0 475 aa13.12□□□□□ -0.31
CDH5-201ENST00000341529 RICTORQ6R327 1708 aa13.12□□□□□ -0.31
CDH5-201ENST00000341529 CD44P16070 742 aaKnown RBP13.11□□□□□ -0.31
CDH5-201ENST00000341529 EIF2AK2P19525 551 aaKnown RBP13.11□□□□□ -0.31
CDH5-201ENST00000341529 NLRX1Q86UT6 975 aa13.11□□□□□ -0.31
CDH5-201ENST00000341529 LRRN4CLQ8ND94 238 aa13.11□□□□□ -0.31
CDH5-201ENST00000341529 PHF20Q9BVI0 1012 aa13.11□□□□□ -0.31
CDH5-201ENST00000341529 SH2D4AQ9H788 454 aa13.11□□□□□ -0.31
CDH5-201ENST00000341529 DNAJC17Q9NVM6 304 aaKnown RBP13.11□□□□□ -0.31
CDH5-201ENST00000341529 PCDHA13Q9Y5I0 950 aa13.11□□□□□ -0.31
CDH5-201ENST00000341529 TERF2Q15554 542 aa13.11□□□□□ -0.31
CDH5-201ENST00000341529 CC2D1AQ6P1N0 951 aaPredicted RBP13.11□□□□□ -0.31
CDH5-201ENST00000341529 NFRKBQ6P4R8 1299 aa13.11□□□□□ -0.31
CDH5-201ENST00000341529 IFNAR2P48551 515 aa13.11□□□□□ -0.31
CDH5-201ENST00000341529 TTC31Q49AM3 519 aaPredicted RBP13.11□□□□□ -0.31
CDH5-201ENST00000341529 NIM1KQ8IY84 436 aa13.11□□□□□ -0.31
CDH5-201ENST00000341529 FAM186BQ8IYM0 893 aa13.11□□□□□ -0.31
CDH5-201ENST00000341529 SLC4A9Q96Q91 983 aa13.11□□□□□ -0.31
CDH5-201ENST00000341529 BARHL2Q9NY43 387 aa13.11□□□□□ -0.31
CDH5-201ENST00000341529 LARSQ9P2J5 1176 aaKnown RBP13.11□□□□□ -0.31
CDH5-201ENST00000341529 BAG6P46379 1132 aa13.11□□□□□ -0.31
CDH5-201ENST00000341529 ZNF577Q9BSK1 485 aa13.11□□□□□ -0.31
CDH5-201ENST00000341529 GCNT4Q9P109 453 aa13.11□□□□□ -0.31
CDH5-201ENST00000341529 PCDHA6Q9UN73 950 aa13.11□□□□□ -0.31
CDH5-201ENST00000341529 PCDHA8Q9Y5H6 950 aa13.11□□□□□ -0.31
CDH5-201ENST00000341529 WDR19Q8NEZ3 1342 aa13.1□□□□□ -0.31
CDH5-201ENST00000341529 MST1RQ04912 1400 aa13.1□□□□□ -0.31
CDH5-201ENST00000341529 ATP1A1P05023 1023 aaKnown RBP13.1□□□□□ -0.31
CDH5-201ENST00000341529 DESP17661 470 aa13.1□□□□□ -0.31
CDH5-201ENST00000341529 ZNF365Q70YC5 407 aa13.1□□□□□ -0.31
CDH5-201ENST00000341529 SFR1Q86XK3 245 aa13.1□□□□□ -0.31
CDH5-201ENST00000341529 IFT74Q96LB3 600 aa13.1□□□□□ -0.31
CDH5-201ENST00000341529 PNMA6FA0A0J9YX94 578 aa13.1□□□□□ -0.31
CDH5-201ENST00000341529 ACTN4O43707 911 aaKnown RBP13.1□□□□□ -0.31
CDH5-201ENST00000341529 BCRP11274 1271 aa13.1□□□□□ -0.31
CDH5-201ENST00000341529 HNRNPH2P55795 449 aaKnown RBP13.1□□□□□ -0.31
CDH5-201ENST00000341529 PPFIA1Q13136 1202 aa13.1□□□□□ -0.31
CDH5-201ENST00000341529 MKRN4PQ13434 485 aaPredicted RBP13.1□□□□□ -0.31
CDH5-201ENST00000341529 QRICH1Q2TAL8 776 aa13.1□□□□□ -0.31
CDH5-201ENST00000341529 INTS5Q6P9B9 1019 aaKnown RBP13.1□□□□□ -0.31
CDH5-201ENST00000341529 RIN2Q8WYP3 895 aaPredicted RBP13.1□□□□□ -0.31
CDH5-201ENST00000341529 CCDC17Q96LX7 622 aa13.1□□□□□ -0.31
CDH5-201ENST00000341529 BPIFA3Q9BQP9 254 aa13.1□□□□□ -0.31
CDH5-201ENST00000341529 DCUN1D2Q6PH85 259 aa13.1□□□□□ -0.31
CDH5-201ENST00000341529 SLFN12Q8IYM2 578 aa13.1□□□□□ -0.31
CDH5-201ENST00000341529 CABS1Q96KC9 395 aa13.1□□□□□ -0.31
CDH5-201ENST00000341529 RGL1Q9NZL6 768 aa13.1□□□□□ -0.31
CDH5-201ENST00000341529 ANKFY1Q9P2R3 1169 aa13.1□□□□□ -0.31
CDH5-201ENST00000341529 NFU1Q9UMS0 254 aa13.1□□□□□ -0.31
CDH5-201ENST00000341529 LAD1O00515 517 aa13.09□□□□□ -0.31
CDH5-201ENST00000341529 INPP5BP32019 993 aa13.09□□□□□ -0.31
CDH5-201ENST00000341529 SLCO1A2P46721 670 aa13.09□□□□□ -0.31
CDH5-201ENST00000341529 GRM4Q14833 912 aa13.09□□□□□ -0.31
CDH5-201ENST00000341529 NTRK3Q16288 839 aa13.09□□□□□ -0.31
CDH5-201ENST00000341529 ADGRF4Q8IZF3 695 aa13.09□□□□□ -0.31
CDH5-201ENST00000341529 GLG1Q92896 1179 aa13.09□□□□□ -0.31
CDH5-201ENST00000341529 PSMD1Q99460 953 aa13.09□□□□□ -0.31
CDH5-201ENST00000341529 PI4KBQ9UBF8 816 aa13.09□□□□□ -0.31
CDH5-201ENST00000341529 ADD3Q9UEY8 706 aaKnown RBP13.09□□□□□ -0.31
CDH5-201ENST00000341529 ADAM21Q9UKJ8 722 aa13.09□□□□□ -0.31
CDH5-201ENST00000341529 VSNL1P62760 191 aa13.09□□□□□ -0.31
CDH5-201ENST00000341529 SNX1Q13596 522 aa13.09□□□□□ -0.31
CDH5-201ENST00000341529 ARHGEF16Q5VV41 709 aa13.09□□□□□ -0.31
CDH5-201ENST00000341529 SLC30A10Q6XR72 485 aa13.09□□□□□ -0.31
CDH5-201ENST00000341529 PNMA8AQ86V59 439 aaPredicted RBP13.09□□□□□ -0.31
CDH5-201ENST00000341529 TRIM9Q9C026 710 aa13.09□□□□□ -0.31
CDH5-201ENST00000341529 GOLPH3Q9H4A6 298 aa13.09□□□□□ -0.31
CDH5-201ENST00000341529 LRRIQ4A6NIV6 560 aa13.09□□□□□ -0.31
CDH5-201ENST00000341529 TADA3O75528 432 aa13.09□□□□□ -0.31
CDH5-201ENST00000341529 SLURP2P0DP57 97 aa13.09□□□□□ -0.31
CDH5-201ENST00000341529 CRKP46108 304 aa13.09□□□□□ -0.31
CDH5-201ENST00000341529 UBL4BQ8N7F7 174 aa13.09□□□□□ -0.31
CDH5-201ENST00000341529 LRRC45Q96CN5 670 aa13.09□□□□□ -0.31
CDH5-201ENST00000341529 THAP9Q9H5L6 903 aa13.09□□□□□ -0.31
CDH5-201ENST00000341529 PDE4DIPQ5VU43 2346 aa13.09□□□□□ -0.31
CDH5-201ENST00000341529 ZBTB16Q05516 673 aa13.08□□□□□ -0.31
CDH5-201ENST00000341529 KAZNQ674X7 775 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms