RNA–Protein interactions for RNA: ENST00000341165.10

NBR1-201, Transcript of NBR1, autophagy cargo receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NBR1, Length 4,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBR1-201ENST00000341165 EDEM3Q9BZQ6 932 aa8.83□□□□□ -1
NBR1-201ENST00000341165 ZSWIM4Q9H7M6 989 aa8.83□□□□□ -1
NBR1-201ENST00000341165 SNED1Q8TER0 1413 aa8.82□□□□□ -1
NBR1-201ENST00000341165 KIAA1551Q9HCM1 1747 aa8.82□□□□□ -1
NBR1-201ENST00000341165 GOLGA6L7A0A1B0GV03 622 aa8.82□□□□□ -1
NBR1-201ENST00000341165 TRAF5O00463 557 aa8.82□□□□□ -1
NBR1-201ENST00000341165 SNHG28P0DPA3 235 aa8.82□□□□□ -1
NBR1-201ENST00000341165 ICA1Q05084 483 aa8.82□□□□□ -1
NBR1-201ENST00000341165 FAM26FQ5R3K3 315 aa8.82□□□□□ -1
NBR1-201ENST00000341165 ANKRD40Q6AI12 368 aa8.82□□□□□ -1
NBR1-201ENST00000341165 CDC42EP5Q6NZY7 148 aa8.82□□□□□ -1
NBR1-201ENST00000341165 FOXR2Q6PJQ5 311 aa8.82□□□□□ -1
NBR1-201ENST00000341165 PRPF38AQ8NAV1 312 aaKnown RBP8.82□□□□□ -1
NBR1-201ENST00000341165 MTMR9Q96QG7 549 aa8.82□□□□□ -1
NBR1-201ENST00000341165 SAR1BQ9Y6B6 198 aa8.82□□□□□ -1
NBR1-201ENST00000341165 PPP1R12BO60237 982 aaPredicted RBP8.82□□□□□ -1
NBR1-201ENST00000341165 NOVP48745 357 aa8.82□□□□□ -1
NBR1-201ENST00000341165 CDK17Q00537 523 aa8.82□□□□□ -1
NBR1-201ENST00000341165 FKBP3Q00688 224 aaKnown RBP8.82□□□□□ -1
NBR1-201ENST00000341165 SATB1Q01826 763 aa8.82□□□□□ -1
NBR1-201ENST00000341165 GABPAQ06546 454 aa8.82□□□□□ -1
NBR1-201ENST00000341165 DDR1Q08345 913 aa8.82□□□□□ -1
NBR1-201ENST00000341165 CCDC181Q5TID7 509 aa8.82□□□□□ -1
NBR1-201ENST00000341165 CC2D2BQ6DHV5 1058 aa8.82□□□□□ -1
NBR1-201ENST00000341165 ARHGAP27Q6ZUM4 889 aa8.82□□□□□ -1
NBR1-201ENST00000341165 TRIM58Q8NG06 486 aa8.82□□□□□ -1
NBR1-201ENST00000341165 CNKSR1Q969H4 720 aa8.82□□□□□ -1
NBR1-201ENST00000341165 ERGIC2Q96RQ1 377 aa8.82□□□□□ -1
NBR1-201ENST00000341165 NDST4Q9H3R1 872 aa8.82□□□□□ -1
NBR1-201ENST00000341165 SPATS2LQ9NUQ6 558 aaKnown RBP8.82□□□□□ -1
NBR1-201ENST00000341165 COL4A1P02462 1669 aa8.82□□□□□ -1
NBR1-201ENST00000341165 EIF3CLB5ME19 914 aaKnown RBP8.82□□□□□ -1
NBR1-201ENST00000341165 STRIP1Q5VSL9 837 aa8.82□□□□□ -1
NBR1-201ENST00000341165 PPP4R3CPQ6ZMV5 832 aa8.82□□□□□ -1
NBR1-201ENST00000341165 KCTD1Q719H9 257 aa8.82□□□□□ -1
NBR1-201ENST00000341165 AMIGO3Q86WK7 504 aa8.82□□□□□ -1
NBR1-201ENST00000341165 EIF3CQ99613 913 aaKnown RBP8.82□□□□□ -1
NBR1-201ENST00000341165 NHEJ1Q9H9Q4 299 aaPredicted RBP8.82□□□□□ -1
NBR1-201ENST00000341165 HDAC9Q9UKV0 1011 aa8.82□□□□□ -1
NBR1-201ENST00000341165 DNM3Q9UQ16 869 aa8.82□□□□□ -1
NBR1-201ENST00000341165 TAF1P21675 1872 aa8.82□□□□□ -1
NBR1-201ENST00000341165 TDP2O95551 362 aa8.81□□□□□ -1
NBR1-201ENST00000341165 STK4Q13043 487 aa8.81□□□□□ -1
NBR1-201ENST00000341165 GRB10Q13322 594 aa8.81□□□□□ -1
NBR1-201ENST00000341165 FAM43BQ6ZT52 329 aaPredicted RBP8.81□□□□□ -1
NBR1-201ENST00000341165 MICALCLQ6ZW33 695 aa8.81□□□□□ -1
NBR1-201ENST00000341165 STXBP4Q6ZWJ1 553 aa8.81□□□□□ -1
NBR1-201ENST00000341165 FBXO11Q86XK2 927 aa8.81□□□□□ -1
NBR1-201ENST00000341165 C2CD5Q86YS7 1000 aa8.81□□□□□ -1
NBR1-201ENST00000341165 RNF168Q8IYW5 571 aaPredicted RBP8.81□□□□□ -1
NBR1-201ENST00000341165 DDX12PQ92771 950 aa8.81□□□□□ -1
NBR1-201ENST00000341165 CEP63Q96MT8 703 aa8.81□□□□□ -1
NBR1-201ENST00000341165 PARD6BQ9BYG5 372 aa8.81□□□□□ -1
NBR1-201ENST00000341165 ARHGEF10LQ9HCE6 1279 aa8.81□□□□□ -1
NBR1-201ENST00000341165 FAM184BQ9ULE4 1060 aa8.81□□□□□ -1
NBR1-201ENST00000341165 THSD7AQ9UPZ6 1657 aa8.81□□□□□ -1
NBR1-201ENST00000341165 CETN3O15182 167 aa8.81□□□□□ -1
NBR1-201ENST00000341165 TBCAO75347 108 aaKnown RBP8.81□□□□□ -1
NBR1-201ENST00000341165 PNMA6AP0CW24 399 aaPredicted RBP8.81□□□□□ -1
NBR1-201ENST00000341165 ERVK-24P63145 666 aa8.81□□□□□ -1
NBR1-201ENST00000341165 MAP2K1Q02750 393 aaPredicted RBP8.81□□□□□ -1
NBR1-201ENST00000341165 UBE2SQ16763 222 aa8.81□□□□□ -1
NBR1-201ENST00000341165 ABCB5Q2M3G0 1257 aa8.81□□□□□ -1
NBR1-201ENST00000341165 MOXD1Q6UVY6 613 aa8.81□□□□□ -1
NBR1-201ENST00000341165 ZDHHC15Q96MV8 337 aa8.81□□□□□ -1
NBR1-201ENST00000341165 ANO3Q9BYT9 981 aa8.81□□□□□ -1
NBR1-201ENST00000341165 JADE2Q9NQC1 790 aa8.81□□□□□ -1
NBR1-201ENST00000341165 ANO9A1A5B4 782 aa8.81□□□□□ -1
NBR1-201ENST00000341165 PAFAH1B1P43034 410 aa8.81□□□□□ -1
NBR1-201ENST00000341165 TDRD12Q587J7 1177 aaKnown RBP8.81□□□□□ -1
NBR1-201ENST00000341165 CENPPQ6IPU0 288 aa8.81□□□□□ -1
NBR1-201ENST00000341165 RSRC2Q7L4I2 434 aaKnown RBP8.81□□□□□ -1
NBR1-201ENST00000341165 KCTD17Q8N5Z5 321 aa8.81□□□□□ -1
NBR1-201ENST00000341165 ZNF507Q8TCN5 953 aa8.81□□□□□ -1
NBR1-201ENST00000341165 IGKV6D-41A0A0C4DH26 115 aa8.81□□□□□ -1
NBR1-201ENST00000341165 USP17L10C9JJH3 530 aa8.81□□□□□ -1
NBR1-201ENST00000341165 CALUO43852 315 aaPredicted RBP8.81□□□□□ -1
NBR1-201ENST00000341165 FCER1AP12319 257 aa8.81□□□□□ -1
NBR1-201ENST00000341165 RPL13P26373 211 aaKnown RBP8.81□□□□□ -1
NBR1-201ENST00000341165 SLC16A2P36021 539 aa8.81□□□□□ -1
NBR1-201ENST00000341165 CDC37Q16543 378 aaPredicted RBP8.81□□□□□ -1
NBR1-201ENST00000341165 HERC4Q5GLZ8 1057 aaPredicted RBP8.81□□□□□ -1
NBR1-201ENST00000341165 ZNF662Q6ZS27 426 aa8.81□□□□□ -1
NBR1-201ENST00000341165 GPBP1Q86WP2 473 aa8.81□□□□□ -1
NBR1-201ENST00000341165 NCAPGQ9BPX3 1015 aa8.81□□□□□ -1
NBR1-201ENST00000341165 SH2D4AQ9H788 454 aa8.81□□□□□ -1
NBR1-201ENST00000341165 TSKSQ9UJT2 592 aa8.81□□□□□ -1
NBR1-201ENST00000341165 COL4A3BPQ9Y5P4 624 aa8.81□□□□□ -1
NBR1-201ENST00000341165 POTEMA6NI47 508 aa8.8□□□□□ -1
NBR1-201ENST00000341165 MYMKA6NI61 221 aa8.8□□□□□ -1
NBR1-201ENST00000341165 TBX3O15119 743 aa8.8□□□□□ -1
NBR1-201ENST00000341165 SHMT1P34896 483 aa8.8□□□□□ -1
NBR1-201ENST00000341165 VAV2P52735 878 aa8.8□□□□□ -1
NBR1-201ENST00000341165 TCP10Q12799 353 aa8.8□□□□□ -1
NBR1-201ENST00000341165 SLC9C1Q4G0N8 1177 aa8.8□□□□□ -1
NBR1-201ENST00000341165 CC2D1AQ6P1N0 951 aaPredicted RBP8.8□□□□□ -1
NBR1-201ENST00000341165 KIAA0825Q8IV33 1275 aa8.8□□□□□ -1
NBR1-201ENST00000341165 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.8□□□□□ -1
NBR1-201ENST00000341165 PSMD14O00487 310 aa8.8□□□□□ -1
NBR1-201ENST00000341165 SLC35G1Q2M3R5 365 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms