RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 GLIS3Q8NEA6 775 aa16.15■□□□□ 0.18
TDP2-201ENST00000341060 EXOC4Q96A65 974 aa16.15■□□□□ 0.18
TDP2-201ENST00000341060 NAP1L4Q99733 375 aaKnown RBP16.15■□□□□ 0.18
TDP2-201ENST00000341060 SH2D4AQ9H788 454 aa16.15■□□□□ 0.18
TDP2-201ENST00000341060 PSTPIP2Q9H939 334 aa16.15■□□□□ 0.18
TDP2-201ENST00000341060 ADAM21Q9UKJ8 722 aa16.15■□□□□ 0.18
TDP2-201ENST00000341060 PCDHA12Q9UN75 941 aa16.15■□□□□ 0.18
TDP2-201ENST00000341060 ATF5Q9Y2D1 282 aaPredicted RBP16.15■□□□□ 0.18
TDP2-201ENST00000341060 USP17L10C9JJH3 530 aa16.14■□□□□ 0.17
TDP2-201ENST00000341060 HLA-DOAP06340 250 aa16.14■□□□□ 0.17
TDP2-201ENST00000341060 SLC16A2P36021 539 aa16.14■□□□□ 0.17
TDP2-201ENST00000341060 CCDC96Q2M329 555 aa16.14■□□□□ 0.17
TDP2-201ENST00000341060 MSL1Q68DK7 614 aa16.14■□□□□ 0.17
TDP2-201ENST00000341060 HHIPL2Q6UWX4 724 aa16.14■□□□□ 0.17
TDP2-201ENST00000341060 ARHGAP27Q6ZUM4 889 aa16.14■□□□□ 0.17
TDP2-201ENST00000341060 BAP1Q92560 729 aa16.14■□□□□ 0.17
TDP2-201ENST00000341060 CAPZA3Q96KX2 299 aa16.14■□□□□ 0.17
TDP2-201ENST00000341060 ZC3H12CQ9C0D7 883 aaKnown RBP16.14■□□□□ 0.17
TDP2-201ENST00000341060 EHD4Q9H223 541 aa16.14■□□□□ 0.17
TDP2-201ENST00000341060 MMRN2Q9H8L6 949 aa16.14■□□□□ 0.17
TDP2-201ENST00000341060 PSD3Q9NYI0 1048 aa16.14■□□□□ 0.17
TDP2-201ENST00000341060 JRKLQ9Y4A0 524 aa16.14■□□□□ 0.17
TDP2-201ENST00000341060 PCDHA13Q9Y5I0 950 aa16.14■□□□□ 0.17
TDP2-201ENST00000341060 ZNF646O15015 1829 aaPredicted RBP16.14■□□□□ 0.17
TDP2-201ENST00000341060 LRRC53A6NM62 1247 aa16.13■□□□□ 0.17
TDP2-201ENST00000341060 FKBP3Q00688 224 aaKnown RBP16.13■□□□□ 0.17
TDP2-201ENST00000341060 CDC42EP5Q6NZY7 148 aa16.13■□□□□ 0.17
TDP2-201ENST00000341060 KCTD1Q719H9 257 aa16.13■□□□□ 0.17
TDP2-201ENST00000341060 EDEM3Q9BZQ6 932 aa16.13■□□□□ 0.17
TDP2-201ENST00000341060 GLT8D2Q9H1C3 349 aa16.13■□□□□ 0.17
TDP2-201ENST00000341060 JADE2Q9NQC1 790 aa16.13■□□□□ 0.17
TDP2-201ENST00000341060 EIF4A3P38919 411 aaKnown RBP16.13■□□□□ 0.17
TDP2-201ENST00000341060 BAG6P46379 1132 aa16.13■□□□□ 0.17
TDP2-201ENST00000341060 SCNN1DP51172 638 aa16.13■□□□□ 0.17
TDP2-201ENST00000341060 LRRC41Q15345 812 aa16.13■□□□□ 0.17
TDP2-201ENST00000341060 MAP9Q49MG5 647 aa16.13■□□□□ 0.17
TDP2-201ENST00000341060 FAM26FQ5R3K3 315 aa16.13■□□□□ 0.17
TDP2-201ENST00000341060 IQCEQ6IPM2 695 aa16.13■□□□□ 0.17
TDP2-201ENST00000341060 GJA10Q969M2 543 aa16.13■□□□□ 0.17
TDP2-201ENST00000341060 TEKT1Q969V4 418 aa16.13■□□□□ 0.17
TDP2-201ENST00000341060 CCDC17Q96LX7 622 aa16.13■□□□□ 0.17
TDP2-201ENST00000341060 DEF6Q9H4E7 631 aa16.13■□□□□ 0.17
TDP2-201ENST00000341060 CALCOCO1Q9P1Z2 691 aa16.13■□□□□ 0.17
TDP2-201ENST00000341060 COL4A3BPQ9Y5P4 624 aa16.13■□□□□ 0.17
TDP2-201ENST00000341060 CAPN6Q9Y6Q1 641 aa16.13■□□□□ 0.17
TDP2-201ENST00000341060 MPHOSPH10O00566 681 aaKnown RBP16.12■□□□□ 0.17
TDP2-201ENST00000341060 MARCH6O60337 910 aa16.12■□□□□ 0.17
TDP2-201ENST00000341060 TACC1O75410 805 aa16.12■□□□□ 0.17
TDP2-201ENST00000341060 SLC15A2Q16348 729 aa16.12■□□□□ 0.17
TDP2-201ENST00000341060 APOBEC3HQ6NTF7 200 aaKnown RBP16.12■□□□□ 0.17
TDP2-201ENST00000341060 RRAGAQ7L523 313 aa16.12■□□□□ 0.17
TDP2-201ENST00000341060 NEK11Q8NG66 645 aa16.12■□□□□ 0.17
TDP2-201ENST00000341060 ACBD3Q9H3P7 528 aa16.12■□□□□ 0.17
TDP2-201ENST00000341060 VIPAS39Q9H9C1 493 aa16.12■□□□□ 0.17
TDP2-201ENST00000341060 PANK4Q9NVE7 773 aa16.12■□□□□ 0.17
TDP2-201ENST00000341060 SNX12Q9UMY4 172 aa16.12■□□□□ 0.17
TDP2-201ENST00000341060 LRRIQ3A6PVS8 624 aaPredicted RBP16.12■□□□□ 0.17
TDP2-201ENST00000341060 ZNF185O15231 689 aa16.12■□□□□ 0.17
TDP2-201ENST00000341060 SLC26A4O43511 780 aa16.12■□□□□ 0.17
TDP2-201ENST00000341060 AKR1B10O60218 316 aa16.12■□□□□ 0.17
TDP2-201ENST00000341060 GYS2P54840 703 aa16.12■□□□□ 0.17
TDP2-201ENST00000341060 ATP2B2Q01814 1243 aa16.12■□□□□ 0.17
TDP2-201ENST00000341060 FLAD1Q8NFF5 587 aa16.12■□□□□ 0.17
TDP2-201ENST00000341060 CAGE1Q8TC20 777 aa16.12■□□□□ 0.17
TDP2-201ENST00000341060 MXD3Q9BW11 206 aa16.12■□□□□ 0.17
TDP2-201ENST00000341060 KCNMB3Q9NPA1 279 aa16.12■□□□□ 0.17
TDP2-201ENST00000341060 BMP2KQ9NSY1 1161 aaPredicted RBP16.12■□□□□ 0.17
TDP2-201ENST00000341060 RNF216Q9NWF9 866 aaPredicted RBP16.12■□□□□ 0.17
TDP2-201ENST00000341060 SSU72P8A0A1W2PR75 194 aa16.11■□□□□ 0.17
TDP2-201ENST00000341060 PDE2AO00408 941 aaPredicted RBP16.11■□□□□ 0.17
TDP2-201ENST00000341060 PRLRP16471 622 aa16.11■□□□□ 0.17
TDP2-201ENST00000341060 USP11P51784 963 aa16.11■□□□□ 0.17
TDP2-201ENST00000341060 ITIH3Q06033 890 aa16.11■□□□□ 0.17
TDP2-201ENST00000341060 NFIAQ12857 509 aa16.11■□□□□ 0.17
TDP2-201ENST00000341060 MAPK8IP2Q13387 824 aaPredicted RBP16.11■□□□□ 0.17
TDP2-201ENST00000341060 ASTE1Q2TB18 679 aaPredicted RBP16.11■□□□□ 0.17
TDP2-201ENST00000341060 PDXDC1Q6P996 788 aa16.11■□□□□ 0.17
TDP2-201ENST00000341060 SMCR8Q8TEV9 937 aaPredicted RBP16.11■□□□□ 0.17
TDP2-201ENST00000341060 CEP63Q96MT8 703 aa16.11■□□□□ 0.17
TDP2-201ENST00000341060 DNAJC18Q9H819 358 aa16.11■□□□□ 0.17
TDP2-201ENST00000341060 MED4Q9NPJ6 270 aa16.11■□□□□ 0.17
TDP2-201ENST00000341060 VPS18Q9P253 973 aa16.11■□□□□ 0.17
TDP2-201ENST00000341060 PCDHA2Q9Y5H9 948 aa16.11■□□□□ 0.17
TDP2-201ENST00000341060 RGPD3A6NKT7 1758 aaPredicted RBP16.11■□□□□ 0.17
TDP2-201ENST00000341060 RGPD4Q7Z3J3 1758 aa16.11■□□□□ 0.17
TDP2-201ENST00000341060 SCN9AQ15858 1988 aa16.11■□□□□ 0.17
TDP2-201ENST00000341060 TRAF5O00463 557 aa16.1■□□□□ 0.17
TDP2-201ENST00000341060 PJA2O43164 708 aa16.1■□□□□ 0.17
TDP2-201ENST00000341060 N4BP1O75113 896 aaKnown RBP16.1■□□□□ 0.17
TDP2-201ENST00000341060 ERCC3P19447 782 aa16.1■□□□□ 0.17
TDP2-201ENST00000341060 MARSP56192 900 aaKnown RBP16.1■□□□□ 0.17
TDP2-201ENST00000341060 KCNMA1Q12791 1236 aa16.1■□□□□ 0.17
TDP2-201ENST00000341060 QRICH1Q2TAL8 776 aa16.1■□□□□ 0.17
TDP2-201ENST00000341060 ZNF572Q7Z3I7 529 aaPredicted RBP16.1■□□□□ 0.17
TDP2-201ENST00000341060 CACNA2D4Q7Z3S7 1137 aa16.1■□□□□ 0.17
TDP2-201ENST00000341060 CREG2Q8IUH2 290 aa16.1■□□□□ 0.17
TDP2-201ENST00000341060 NLGN1Q8N2Q7 840 aa16.1■□□□□ 0.17
TDP2-201ENST00000341060 FAM71BQ8TC56 605 aa16.1■□□□□ 0.17
TDP2-201ENST00000341060 TANGO6Q9C0B7 1094 aa16.1■□□□□ 0.17
TDP2-201ENST00000341060 STK32BQ9NY57 414 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 122.1 ms