RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.7■□□□□ 0.422e-9■■■■□ 20.2
VAPA-201ENST00000340541 ALDH8A1Q9H2A2 487 aaPredicted RBP17.7■□□□□ 0.42
VAPA-201ENST00000340541 BARHL2Q9NY43 387 aa17.7■□□□□ 0.42
VAPA-201ENST00000340541 DDX41Q9UJV9 622 aaKnown RBP17.7■□□□□ 0.42
VAPA-201ENST00000340541 A6NJR5 290 aa17.69■□□□□ 0.42
VAPA-201ENST00000340541 hCG_1984214I3L0E3 225 aa17.69■□□□□ 0.42
VAPA-201ENST00000340541 PRPF3O43395 683 aaKnown RBP17.69■□□□□ 0.42
VAPA-201ENST00000340541 IFNAR1P17181 557 aa17.69■□□□□ 0.42
VAPA-201ENST00000340541 DNAJB2P25686 324 aa17.69■□□□□ 0.42
VAPA-201ENST00000340541 CCND2P30279 289 aa17.69■□□□□ 0.42
VAPA-201ENST00000340541 NAPAP54920 295 aa17.69■□□□□ 0.42
VAPA-201ENST00000340541 ARHGAP1Q07960 439 aa17.69■□□□□ 0.42
VAPA-201ENST00000340541 ITGA7Q13683 1181 aa17.69■□□□□ 0.42
VAPA-201ENST00000340541 LY6KQ17RY6 165 aa17.69■□□□□ 0.42
VAPA-201ENST00000340541 PSRC1Q6PGN9 363 aaPredicted RBP17.69■□□□□ 0.42
VAPA-201ENST00000340541 C16orf59Q7L2K0 433 aa17.69■□□□□ 0.42
VAPA-201ENST00000340541 ZNF713Q8N859 430 aaPredicted RBP17.69■□□□□ 0.42
VAPA-201ENST00000340541 MYLIPQ8WY64 445 aa17.69■□□□□ 0.42
VAPA-201ENST00000340541 CUL5Q93034 780 aa17.69■□□□□ 0.42
VAPA-201ENST00000340541 PHKBQ93100 1093 aa17.69■□□□□ 0.42
VAPA-201ENST00000340541 COL25A1Q9BXS0 654 aaPredicted RBP17.69■□□□□ 0.42
VAPA-201ENST00000340541 GRIN2DO15399 1336 aa17.69■□□□□ 0.42
VAPA-201ENST00000340541 PPFIA3O75145 1194 aa17.68■□□□□ 0.42
VAPA-201ENST00000340541 SCG2P13521 617 aa17.68■□□□□ 0.42
VAPA-201ENST00000340541 FOSL2P15408 326 aa17.68■□□□□ 0.42
VAPA-201ENST00000340541 CSF2RAP15509 400 aa17.68■□□□□ 0.42
VAPA-201ENST00000340541 INPP4AQ96PE3 977 aaPredicted RBP17.68■□□□□ 0.42
VAPA-201ENST00000340541 RIC8AQ9NPQ8 531 aa17.68■□□□□ 0.42
VAPA-201ENST00000340541 MYH7BA7E2Y1 1941 aa17.68■□□□□ 0.42
VAPA-201ENST00000340541 SCN10AQ9Y5Y9 1956 aa17.68■□□□□ 0.42
VAPA-201ENST00000340541 GH1P01241 217 aa17.67■□□□□ 0.42
VAPA-201ENST00000340541 CPT1AP50416 773 aa17.67■□□□□ 0.42
VAPA-201ENST00000340541 PURAQ00577 322 aaKnown RBP17.67■□□□□ 0.42
VAPA-201ENST00000340541 SP2Q02086 613 aa17.67■□□□□ 0.42
VAPA-201ENST00000340541 PCNX4Q63HM2 1172 aa17.67■□□□□ 0.42
VAPA-201ENST00000340541 TEX2Q8IWB9 1127 aa17.67■□□□□ 0.42
VAPA-201ENST00000340541 EMID1Q96A84 441 aaPredicted RBP17.67■□□□□ 0.42
VAPA-201ENST00000340541 RNF26Q9BY78 433 aaPredicted RBP17.67■□□□□ 0.42
VAPA-201ENST00000340541 MTIF3Q9H2K0 278 aaKnown RBP17.67■□□□□ 0.42
VAPA-201ENST00000340541 ZNF576Q9H609 170 aa17.67■□□□□ 0.42
VAPA-201ENST00000340541 IL23AQ9NPF7 189 aa17.67■□□□□ 0.42
VAPA-201ENST00000340541 TPCN1Q9ULQ1 816 aa17.67■□□□□ 0.42
VAPA-201ENST00000340541 MRVI1Q9Y6F6 885 aa17.67■□□□□ 0.42
VAPA-201ENST00000340541 SMCO2A6NFE2 343 aa17.66■□□□□ 0.42
VAPA-201ENST00000340541 ADAMTS3O15072 1205 aa17.66■□□□□ 0.42
VAPA-201ENST00000340541 STAM2O75886 525 aa17.66■□□□□ 0.42
VAPA-201ENST00000340541 ICAM3P32942 547 aa17.66■□□□□ 0.42
VAPA-201ENST00000340541 CLK2P49760 499 aaKnown RBP17.66■□□□□ 0.42
VAPA-201ENST00000340541 AK2P54819 239 aa17.66■□□□□ 0.42
VAPA-201ENST00000340541 SEMA3FQ13275 785 aa17.66■□□□□ 0.42
VAPA-201ENST00000340541 XRRA1Q6P2D8 792 aa17.66■□□□□ 0.42
VAPA-201ENST00000340541 ZNF365Q70YC5 407 aa17.66■□□□□ 0.42
VAPA-201ENST00000340541 AFG1LQ8WV93 481 aa17.66■□□□□ 0.42
VAPA-201ENST00000340541 HERVK_113Q902F9 699 aa17.66■□□□□ 0.42
VAPA-201ENST00000340541 TIFAQ96CG3 184 aa17.66■□□□□ 0.42
VAPA-201ENST00000340541 HIPK3Q9H422 1215 aa17.66■□□□□ 0.42
VAPA-201ENST00000340541 POLR3EQ9NVU0 708 aa17.66■□□□□ 0.42
VAPA-201ENST00000340541 PCDHA6Q9UN73 950 aa17.66■□□□□ 0.42
VAPA-201ENST00000340541 PCDHA8Q9Y5H6 950 aa17.66■□□□□ 0.42
VAPA-201ENST00000340541 ESYT2A0FGR8 921 aa17.65■□□□□ 0.42
VAPA-201ENST00000340541 FGBP02675 491 aa17.65■□□□□ 0.42
VAPA-201ENST00000340541 MMP3P08254 477 aa17.65■□□□□ 0.42
VAPA-201ENST00000340541 TGFB3P10600 412 aa17.65■□□□□ 0.42
VAPA-201ENST00000340541 UBA1P22314 1058 aaKnown RBP17.65■□□□□ 0.42
VAPA-201ENST00000340541 ADCY7P51828 1080 aa17.65■□□□□ 0.42
VAPA-201ENST00000340541 PSMC6P62333 389 aa17.65■□□□□ 0.42
VAPA-201ENST00000340541 STK3Q13188 491 aa17.65■□□□□ 0.42
VAPA-201ENST00000340541 GRIN2CQ14957 1233 aa17.65■□□□□ 0.42
VAPA-201ENST00000340541 KCNV1Q6PIU1 500 aa17.65■□□□□ 0.42
VAPA-201ENST00000340541 SLC26A6Q9BXS9 759 aa17.65■□□□□ 0.42
VAPA-201ENST00000340541 PPP1R12CQ9BZL4 782 aa17.65■□□□□ 0.42
VAPA-201ENST00000340541 BCAS3Q9H6U6 928 aa17.65■□□□□ 0.42
VAPA-201ENST00000340541 RTEL1Q9NZ71 1219 aa17.65■□□□□ 0.42
VAPA-201ENST00000340541 SPDYE3A6NKU9 549 aa17.64■□□□□ 0.41
VAPA-201ENST00000340541 SPATA31C2B4DYI2 1134 aa17.64■□□□□ 0.41
VAPA-201ENST00000340541 MYL3P08590 195 aa17.64■□□□□ 0.41
VAPA-201ENST00000340541 SUPT20HL2P0C7V6 817 aa17.64■□□□□ 0.41
VAPA-201ENST00000340541 CYP2C18P33260 490 aa17.64■□□□□ 0.41
VAPA-201ENST00000340541 SCRN1Q12765 414 aa17.64■□□□□ 0.41
VAPA-201ENST00000340541 CELF3Q5SZQ8 465 aaKnown RBP17.64■□□□□ 0.41
VAPA-201ENST00000340541 MYSM1Q5VVJ2 828 aa17.64■□□□□ 0.41
VAPA-201ENST00000340541 PPP4R3CPQ6ZMV5 832 aa17.64■□□□□ 0.41
VAPA-201ENST00000340541 RPUSD2Q8IZ73 545 aaKnown RBP17.64■□□□□ 0.41
VAPA-201ENST00000340541 MTG1Q9BT17 334 aaPredicted RBP17.64■□□□□ 0.41
VAPA-201ENST00000340541 ZMYND12Q9H0C1 365 aa17.64■□□□□ 0.41
VAPA-201ENST00000340541 TMEM260Q9NX78 707 aa17.64■□□□□ 0.41
VAPA-201ENST00000340541 DOCK5Q9H7D0 1870 aa17.64■□□□□ 0.41
VAPA-201ENST00000340541 KPNA6O60684 536 aa17.63■□□□□ 0.41
VAPA-201ENST00000340541 PFKFB2O60825 505 aa17.63■□□□□ 0.41
VAPA-201ENST00000340541 GGPS1O95749 300 aa17.63■□□□□ 0.41
VAPA-201ENST00000340541 HOXD8P13378 290 aaPredicted RBP17.63■□□□□ 0.41
VAPA-201ENST00000340541 ITGB5P18084 799 aa17.63■□□□□ 0.41
VAPA-201ENST00000340541 LAMC2Q13753 1193 aa17.63■□□□□ 0.41
VAPA-201ENST00000340541 RAB30Q15771 203 aa17.63■□□□□ 0.41
VAPA-201ENST00000340541 GNPTABQ3T906 1256 aa17.63■□□□□ 0.41
VAPA-201ENST00000340541 BRDTQ58F21 947 aaPredicted RBP17.63■□□□□ 0.41
VAPA-201ENST00000340541 PPTC7Q8NI37 304 aa17.63■□□□□ 0.41
VAPA-201ENST00000340541 SYMPKQ92797 1274 aaKnown RBP17.63■□□□□ 0.41
VAPA-201ENST00000340541 PGBD1Q96JS3 809 aa17.63■□□□□ 0.41
VAPA-201ENST00000340541 KIF2CQ99661 725 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms