RNA–Protein interactions for RNA: ENST00000338995.10

COMMD4-202, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-202ENST00000338995 GGPS1O95749 300 aa16.48■□□□□ 0.23
COMMD4-202ENST00000338995 AMHP03971 560 aa16.48■□□□□ 0.23
COMMD4-202ENST00000338995 GNAT1P11488 350 aa16.48■□□□□ 0.23
COMMD4-202ENST00000338995 SART3Q15020 963 aaKnown RBP16.48■□□□□ 0.23
COMMD4-202ENST00000338995 GNPTABQ3T906 1256 aa16.48■□□□□ 0.23
COMMD4-202ENST00000338995 ZNF618Q5T7W0 954 aa16.48■□□□□ 0.23
COMMD4-202ENST00000338995 STAG2Q8N3U4 1231 aa16.48■□□□□ 0.23
COMMD4-202ENST00000338995 MTMR8Q96EF0 704 aa16.48■□□□□ 0.23
COMMD4-202ENST00000338995 CHD9Q3L8U1 2897 aa16.48■□□□□ 0.23
COMMD4-202ENST00000338995 TET1Q8NFU7 2136 aa16.48■□□□□ 0.23
COMMD4-202ENST00000338995 TCF20Q9UGU0 1960 aaKnown RBP16.47■□□□□ 0.23
COMMD4-202ENST00000338995 PALM3A6NDB9 673 aaPredicted RBP16.47■□□□□ 0.23
COMMD4-202ENST00000338995 RSPH10B2B2RC85 870 aa16.47■□□□□ 0.23
COMMD4-202ENST00000338995 NOP56O00567 594 aaKnown RBP16.47■□□□□ 0.23
COMMD4-202ENST00000338995 LGR5O75473 907 aa16.47■□□□□ 0.23
COMMD4-202ENST00000338995 STAM2O75886 525 aa16.47■□□□□ 0.23
COMMD4-202ENST00000338995 RSPH10BP0C881 870 aa16.47■□□□□ 0.23
COMMD4-202ENST00000338995 ZNF286BP0CG31 522 aa16.47■□□□□ 0.23
COMMD4-202ENST00000338995 HOXD8P13378 290 aaPredicted RBP16.47■□□□□ 0.23
COMMD4-202ENST00000338995 THPOP40225 353 aa16.47■□□□□ 0.23
COMMD4-202ENST00000338995 ERVK-21P61565 698 aa16.47■□□□□ 0.23
COMMD4-202ENST00000338995 GPNMBQ14956 572 aa16.47■□□□□ 0.23
COMMD4-202ENST00000338995 PGM5Q15124 567 aa16.47■□□□□ 0.23
COMMD4-202ENST00000338995 KRT40Q6A162 431 aa16.47■□□□□ 0.23
COMMD4-202ENST00000338995 NECAB3Q96P71 396 aaPredicted RBP16.47■□□□□ 0.23
COMMD4-202ENST00000338995 MAD2L2Q9UI95 211 aa16.47■□□□□ 0.23
COMMD4-202ENST00000338995 C17orf102A2RUQ5 167 aa16.46■□□□□ 0.23
COMMD4-202ENST00000338995 H3BRB1 525 aa16.46■□□□□ 0.23
COMMD4-202ENST00000338995 IFIT3O14879 490 aaKnown RBP16.46■□□□□ 0.23
COMMD4-202ENST00000338995 IGHDP01880 384 aa16.46■□□□□ 0.23
COMMD4-202ENST00000338995 HOXA13P31271 388 aaPredicted RBP16.46■□□□□ 0.23
COMMD4-202ENST00000338995 DEFB103AP81534 67 aa16.46■□□□□ 0.23
COMMD4-202ENST00000338995 NEDD9Q14511 834 aa16.46■□□□□ 0.23
COMMD4-202ENST00000338995 SEC23AQ15436 765 aa16.46■□□□□ 0.23
COMMD4-202ENST00000338995 HSDL1Q3SXM5 330 aa16.46■□□□□ 0.23
COMMD4-202ENST00000338995 RALYLQ86SE5 291 aaKnown RBP16.46■□□□□ 0.23
COMMD4-202ENST00000338995 FCHSD1Q86WN1 690 aa16.46■□□□□ 0.23
COMMD4-202ENST00000338995 HOMER1Q86YM7 354 aa16.46■□□□□ 0.23
COMMD4-202ENST00000338995 ATP6V0A1Q93050 837 aa16.46■□□□□ 0.23
COMMD4-202ENST00000338995 USP26Q9BXU7 913 aa16.46■□□□□ 0.23
COMMD4-202ENST00000338995 TUT1Q9H6E5 874 aaKnown RBP16.46■□□□□ 0.23
COMMD4-202ENST00000338995 MYH6P13533 1939 aa16.45■□□□□ 0.22
COMMD4-202ENST00000338995 KIAA1217Q5T5P2 1943 aa16.45■□□□□ 0.22
COMMD4-202ENST00000338995 PNMA6FA0A0J9YX94 578 aa16.45■□□□□ 0.22
COMMD4-202ENST00000338995 LCHNA4D1U4 455 aa16.45■□□□□ 0.22
COMMD4-202ENST00000338995 ARHGEF15O94989 841 aa16.45■□□□□ 0.22
COMMD4-202ENST00000338995 TRIM71Q2Q1W2 868 aaKnown RBP16.45■□□□□ 0.22
COMMD4-202ENST00000338995 FAM117BQ6P1L5 589 aa16.45■□□□□ 0.22
COMMD4-202ENST00000338995 SERINC5Q86VE9 423 aa16.45■□□□□ 0.22
COMMD4-202ENST00000338995 SEPT8Q92599 483 aa16.45■□□□□ 0.22
COMMD4-202ENST00000338995 RIOX1Q9H6W3 641 aa16.45■□□□□ 0.22
COMMD4-202ENST00000338995 SUGCTQ9HAC7 445 aa16.45■□□□□ 0.22
COMMD4-202ENST00000338995 MTUS1Q9ULD2 1270 aa16.45■□□□□ 0.22
COMMD4-202ENST00000338995 CHD7Q9P2D1 2997 aa16.44■□□□□ 0.22
COMMD4-202ENST00000338995 OPLAHO14841 1288 aa16.44■□□□□ 0.22
COMMD4-202ENST00000338995 SORBS3O60504 671 aa16.44■□□□□ 0.22
COMMD4-202ENST00000338995 LPXNO60711 386 aa16.44■□□□□ 0.22
COMMD4-202ENST00000338995 CAND2O75155 1236 aa16.44■□□□□ 0.22
COMMD4-202ENST00000338995 RGS20O76081 388 aa16.44■□□□□ 0.22
COMMD4-202ENST00000338995 ZNF200P98182 395 aaPredicted RBP16.44■□□□□ 0.22
COMMD4-202ENST00000338995 GRM4Q14833 912 aa16.44■□□□□ 0.22
COMMD4-202ENST00000338995 WTAPQ15007 396 aa16.44■□□□□ 0.22
COMMD4-202ENST00000338995 PTPROQ16827 1216 aa16.44■□□□□ 0.22
COMMD4-202ENST00000338995 TMCO2Q7Z6W1 182 aaPredicted RBP16.44■□□□□ 0.22
COMMD4-202ENST00000338995 CATIPQ7Z7H3 387 aa16.44■□□□□ 0.22
COMMD4-202ENST00000338995 DBF4BQ8NFT6 615 aa16.44■□□□□ 0.22
COMMD4-202ENST00000338995 CUL5Q93034 780 aa16.44■□□□□ 0.22
COMMD4-202ENST00000338995 FAM122AQ96E09 287 aa16.44■□□□□ 0.22
COMMD4-202ENST00000338995 SAMD11Q96NU1 681 aa16.44■□□□□ 0.22
COMMD4-202ENST00000338995 PIGSQ96S52 555 aa16.44■□□□□ 0.22
COMMD4-202ENST00000338995 C16orf70Q9BSU1 422 aa16.44■□□□□ 0.22
COMMD4-202ENST00000338995 MYH7BA7E2Y1 1941 aa16.44■□□□□ 0.22
COMMD4-202ENST00000338995 SPTBN5Q9NRC6 3674 aaKnown RBP16.43■□□□□ 0.22
COMMD4-202ENST00000338995 LINC01553A4QN01 128 aa16.43■□□□□ 0.22
COMMD4-202ENST00000338995 UBA1P22314 1058 aaKnown RBP16.43■□□□□ 0.22
COMMD4-202ENST00000338995 SP2Q02086 613 aa16.43■□□□□ 0.22
COMMD4-202ENST00000338995 CYB5R4Q7L1T6 521 aa16.43■□□□□ 0.22
COMMD4-202ENST00000338995 MYOCDQ8IZQ8 938 aa16.43■□□□□ 0.22
COMMD4-202ENST00000338995 FBXO22Q8NEZ5 403 aa16.43■□□□□ 0.22
COMMD4-202ENST00000338995 NCOA7Q8NI08 942 aa16.43■□□□□ 0.22
COMMD4-202ENST00000338995 GDPD5Q8WTR4 605 aa16.43■□□□□ 0.22
COMMD4-202ENST00000338995 ZNF215Q9UL58 517 aaPredicted RBP16.43■□□□□ 0.22
COMMD4-202ENST00000338995 TANC1Q9C0D5 1861 aa16.42■□□□□ 0.22
COMMD4-202ENST00000338995 PPP1R11O60927 126 aaPredicted RBP16.42■□□□□ 0.22
COMMD4-202ENST00000338995 SMIM10L2AP0DMW4 78 aa16.42■□□□□ 0.22
COMMD4-202ENST00000338995 SMIM10L2BP0DMW5 78 aa16.42■□□□□ 0.22
COMMD4-202ENST00000338995 ICAM3P32942 547 aa16.42■□□□□ 0.22
COMMD4-202ENST00000338995 PLEKHG4Q58EX7 1191 aa16.42■□□□□ 0.22
COMMD4-202ENST00000338995 XRRA1Q6P2D8 792 aa16.42■□□□□ 0.22
COMMD4-202ENST00000338995 TRAF7Q6Q0C0 670 aa16.42■□□□□ 0.22
COMMD4-202ENST00000338995 GIMAP8Q8ND71 665 aaPredicted RBP16.42■□□□□ 0.22
COMMD4-202ENST00000338995 RNPEPQ9H4A4 650 aa16.42■□□□□ 0.22
COMMD4-202ENST00000338995 SPATA31C2B4DYI2 1134 aa16.41■□□□□ 0.22
COMMD4-202ENST00000338995 FIBPO43427 364 aa16.41■□□□□ 0.22
COMMD4-202ENST00000338995 LGALS2P05162 132 aa16.41■□□□□ 0.22
COMMD4-202ENST00000338995 PUS10Q3MIT2 529 aaKnown RBP16.41■□□□□ 0.22
COMMD4-202ENST00000338995 TMEM31Q5JXX7 168 aa16.41■□□□□ 0.22
COMMD4-202ENST00000338995 METTL7BQ6UX53 244 aa16.41■□□□□ 0.22
COMMD4-202ENST00000338995 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.41■□□□□ 0.22
COMMD4-202ENST00000338995 NLRX1Q86UT6 975 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms