RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 KCND1Q9NSA2 647 aa12.4□□□□□ -0.42
LRP1-202ENST00000338962 EXOC1Q9NV70 894 aa12.4□□□□□ -0.42
LRP1-202ENST00000338962 TRMT1Q9NXH9 659 aaKnown RBP12.4□□□□□ -0.42
LRP1-202ENST00000338962 PCDHA12Q9UN75 941 aa12.4□□□□□ -0.42
LRP1-202ENST00000338962 SPDYE3A6NKU9 549 aa12.4□□□□□ -0.42
LRP1-202ENST00000338962 C19orf81C9J6K1 198 aa12.4□□□□□ -0.42
LRP1-202ENST00000338962 MEIS2O14770 477 aa12.4□□□□□ -0.42
LRP1-202ENST00000338962 SV2BQ7L1I2 683 aa12.4□□□□□ -0.42
LRP1-202ENST00000338962 OTUD5Q96G74 571 aa12.4□□□□□ -0.42
LRP1-202ENST00000338962 MS4A4AQ96JQ5 239 aa12.4□□□□□ -0.42
LRP1-202ENST00000338962 C7orf25Q9BPX7 421 aa12.4□□□□□ -0.42
LRP1-202ENST00000338962 GTPBP4Q9BZE4 634 aaKnown RBP12.4□□□□□ -0.42
LRP1-202ENST00000338962 ADD3Q9UEY8 706 aaKnown RBP12.4□□□□□ -0.42
LRP1-202ENST00000338962 COBLO75128 1261 aa12.39□□□□□ -0.43
LRP1-202ENST00000338962 PDE4DQ08499 809 aa12.39□□□□□ -0.43
LRP1-202ENST00000338962 TBX2Q13207 712 aaPredicted RBP12.39□□□□□ -0.43
LRP1-202ENST00000338962 GRB10Q13322 594 aa12.39□□□□□ -0.43
LRP1-202ENST00000338962 PTPN14Q15678 1187 aa12.39□□□□□ -0.43
LRP1-202ENST00000338962 LARP4BQ92615 738 aaKnown RBP12.39□□□□□ -0.43
LRP1-202ENST00000338962 HAS1Q92839 578 aa12.39□□□□□ -0.43
LRP1-202ENST00000338962 C12orf42Q96LP6 360 aa12.39□□□□□ -0.43
LRP1-202ENST00000338962 SH2D4AQ9H788 454 aa12.39□□□□□ -0.43
LRP1-202ENST00000338962 PRR12Q9ULL5 1215 aa12.39□□□□□ -0.43
LRP1-202ENST00000338962 MYH7BA7E2Y1 1941 aa12.39□□□□□ -0.43
LRP1-202ENST00000338962 A0A0G2JLL6 359 aaPredicted RBP12.39□□□□□ -0.43
LRP1-202ENST00000338962 USP14P54578 494 aa12.39□□□□□ -0.43
LRP1-202ENST00000338962 TRAF1Q13077 416 aa12.39□□□□□ -0.43
LRP1-202ENST00000338962 E4F1Q66K89 784 aaPredicted RBP12.39□□□□□ -0.43
LRP1-202ENST00000338962 PRRT2Q7Z6L0 340 aaPredicted RBP12.39□□□□□ -0.43
LRP1-202ENST00000338962 TESPA1A2RU30 521 aaPredicted RBP12.38□□□□□ -0.43
LRP1-202ENST00000338962 N4BP3O15049 544 aa12.38□□□□□ -0.43
LRP1-202ENST00000338962 TEX33O43247 280 aa12.38□□□□□ -0.43
LRP1-202ENST00000338962 FOSP01100 380 aaPredicted RBP12.38□□□□□ -0.43
LRP1-202ENST00000338962 CCT6AP40227 531 aaKnown RBP12.38□□□□□ -0.43
LRP1-202ENST00000338962 PPP1R2P41236 205 aa12.38□□□□□ -0.43
LRP1-202ENST00000338962 ARHGAP4P98171 946 aa12.38□□□□□ -0.43
LRP1-202ENST00000338962 SNAPC2Q13487 334 aa12.38□□□□□ -0.43
LRP1-202ENST00000338962 KRT31Q15323 416 aa12.38□□□□□ -0.43
LRP1-202ENST00000338962 TCP11X2Q5H9J9 407 aa12.38□□□□□ -0.43
LRP1-202ENST00000338962 CNNM4Q6P4Q7 775 aa12.38□□□□□ -0.43
LRP1-202ENST00000338962 MOXD1Q6UVY6 613 aa12.38□□□□□ -0.43
LRP1-202ENST00000338962 CREBRFQ8IUR6 639 aa12.38□□□□□ -0.43
LRP1-202ENST00000338962 TRIM47Q96LD4 638 aa12.38□□□□□ -0.43
LRP1-202ENST00000338962 PNMA5Q96PV4 448 aa12.38□□□□□ -0.43
LRP1-202ENST00000338962 TMX1Q9H3N1 280 aa12.38□□□□□ -0.43
LRP1-202ENST00000338962 VCPKMTQ9H867 229 aa12.38□□□□□ -0.43
LRP1-202ENST00000338962 BLOC1S4Q9NUP1 217 aa12.38□□□□□ -0.43
LRP1-202ENST00000338962 LIMA1Q9UHB6 759 aaKnown RBP12.38□□□□□ -0.43
LRP1-202ENST00000338962 CYP3A7-CYP3A51PA0A087WV96 503 aa12.37□□□□□ -0.43
LRP1-202ENST00000338962 TRIM49BA6NDI0 452 aa12.37□□□□□ -0.43
LRP1-202ENST00000338962 KCNJ18B7U540 433 aa12.37□□□□□ -0.43
LRP1-202ENST00000338962 ARHGAP6O43182 974 aa12.37□□□□□ -0.43
LRP1-202ENST00000338962 CCP110O43303 1012 aa12.37□□□□□ -0.43
LRP1-202ENST00000338962 CYP3A7P24462 503 aa12.37□□□□□ -0.43
LRP1-202ENST00000338962 GTF2F1P35269 517 aaKnown RBP eCLIP12.37□□□□□ -0.43
LRP1-202ENST00000338962 GTF2A2P52657 109 aa12.37□□□□□ -0.43
LRP1-202ENST00000338962 GOLGA8FQ08AF8 430 aa12.37□□□□□ -0.43
LRP1-202ENST00000338962 GOLGA8DPQ0D2H9 430 aa12.37□□□□□ -0.43
LRP1-202ENST00000338962 MTMR2Q13614 643 aa12.37□□□□□ -0.43
LRP1-202ENST00000338962 MOGSQ13724 837 aa12.37□□□□□ -0.43
LRP1-202ENST00000338962 KCNJ12Q14500 433 aa12.37□□□□□ -0.43
LRP1-202ENST00000338962 FAM83BQ5T0W9 1011 aa12.37□□□□□ -0.43
LRP1-202ENST00000338962 CEP135Q66GS9 1140 aa12.37□□□□□ -0.43
LRP1-202ENST00000338962 NYAP1Q6ZVC0 841 aa12.37□□□□□ -0.43
LRP1-202ENST00000338962 SLFN12Q8IYM2 578 aa12.37□□□□□ -0.43
LRP1-202ENST00000338962 LPAR1Q92633 364 aa12.37□□□□□ -0.43
LRP1-202ENST00000338962 DHTKD1Q96HY7 919 aaPredicted RBP12.37□□□□□ -0.43
LRP1-202ENST00000338962 BAG1Q99933 345 aaPredicted RBP12.37□□□□□ -0.43
LRP1-202ENST00000338962 LRRC27Q9C0I9 530 aa12.37□□□□□ -0.43
LRP1-202ENST00000338962 KCNMB3Q9NPA1 279 aa12.37□□□□□ -0.43
LRP1-202ENST00000338962 EMILIN3Q9NT22 766 aa12.37□□□□□ -0.43
LRP1-202ENST00000338962 KDM3AQ9Y4C1 1321 aa12.37□□□□□ -0.43
LRP1-202ENST00000338962 LRRC10BA6NIK2 292 aa12.37□□□□□ -0.43
LRP1-202ENST00000338962 KIF2AO00139 706 aaPredicted RBP12.37□□□□□ -0.43
LRP1-202ENST00000338962 INHBEP58166 350 aa12.37□□□□□ -0.43
LRP1-202ENST00000338962 NOGQ13253 232 aa12.37□□□□□ -0.43
LRP1-202ENST00000338962 MCM6Q14566 821 aa12.37□□□□□ -0.43
LRP1-202ENST00000338962 CYP4F22Q6NT55 531 aa12.37□□□□□ -0.43
LRP1-202ENST00000338962 PPFIBP1Q86W92 1011 aa12.37□□□□□ -0.43
LRP1-202ENST00000338962 TC2NQ8N9U0 490 aa12.37□□□□□ -0.43
LRP1-202ENST00000338962 ZNF592Q92610 1267 aa12.37□□□□□ -0.43
LRP1-202ENST00000338962 RAD54LQ92698 747 aa12.37□□□□□ -0.43
LRP1-202ENST00000338962 GJA10Q969M2 543 aa12.37□□□□□ -0.43
LRP1-202ENST00000338962 PPP1R13BQ96KQ4 1090 aa12.37□□□□□ -0.43
LRP1-202ENST00000338962 NT5C3AQ9H0P0 336 aa12.37□□□□□ -0.43
LRP1-202ENST00000338962 PAXBP1Q9Y5B6 917 aa12.37□□□□□ -0.43
LRP1-202ENST00000338962 BICDL2A1A5D9 508 aa12.36□□□□□ -0.43
LRP1-202ENST00000338962 MANSC4A6NHS7 340 aaPredicted RBP12.36□□□□□ -0.43
LRP1-202ENST00000338962 CETPP11597 493 aa12.36□□□□□ -0.43
LRP1-202ENST00000338962 SREBF1P36956 1147 aa12.36□□□□□ -0.43
LRP1-202ENST00000338962 ADKP55263 362 aaKnown RBP12.36□□□□□ -0.43
LRP1-202ENST00000338962 HTRA3P83110 453 aa12.36□□□□□ -0.43
LRP1-202ENST00000338962 STK4Q13043 487 aa12.36□□□□□ -0.43
LRP1-202ENST00000338962 ZYXQ15942 572 aaKnown RBP12.36□□□□□ -0.43
LRP1-202ENST00000338962 TMEM119Q4V9L6 283 aa12.36□□□□□ -0.43
LRP1-202ENST00000338962 PRR16Q569H4 304 aa12.36□□□□□ -0.43
LRP1-202ENST00000338962 KIAA1755Q5JYT7 1200 aa12.36□□□□□ -0.43
LRP1-202ENST00000338962 UTP14CQ5TAP6 766 aaKnown RBP12.36□□□□□ -0.43
LRP1-202ENST00000338962 FASTKD5Q7L8L6 764 aaKnown RBP12.36□□□□□ -0.43
LRP1-202ENST00000338962 PROCA1Q8NCQ7 364 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms