RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 ARHGAP42A6NI28 874 aa14.96□□□□□ -0.01
RTN4-202ENST00000337526 GRM1Q13255 1194 aa14.96□□□□□ -0.01
RTN4-202ENST00000337526 TNFAIP1Q13829 316 aa14.96□□□□□ -0.01
RTN4-202ENST00000337526 EMBQ6PCB8 327 aa14.96□□□□□ -0.01
RTN4-202ENST00000337526 MB21D2Q8IYB1 491 aaPredicted RBP14.96□□□□□ -0.01
RTN4-202ENST00000337526 MLXIPQ9HAP2 919 aa14.96□□□□□ -0.01
RTN4-202ENST00000337526 USP21Q9UK80 565 aa14.96□□□□□ -0.01
RTN4-202ENST00000337526 STAM2O75886 525 aa14.96□□□□□ -0.02
RTN4-202ENST00000337526 PLA2G4BP0C869 781 aa14.96□□□□□ -0.02
RTN4-202ENST00000337526 KRT81Q14533 505 aa14.96□□□□□ -0.02
RTN4-202ENST00000337526 SEPT2Q15019 361 aa14.96□□□□□ -0.02
RTN4-202ENST00000337526 CC2D1AQ6P1N0 951 aaPredicted RBP14.96□□□□□ -0.02
RTN4-202ENST00000337526 ANKARQ7Z5J8 1434 aa14.95□□□□□ -0.02
RTN4-202ENST00000337526 SNCBQ16143 134 aa14.95□□□□□ -0.02
RTN4-202ENST00000337526 SUSD4Q5VX71 490 aa14.95□□□□□ -0.02
RTN4-202ENST00000337526 TRIM68Q6AZZ1 485 aa14.95□□□□□ -0.02
RTN4-202ENST00000337526 METTL13Q8N6R0 699 aa14.95□□□□□ -0.02
RTN4-202ENST00000337526 MIPOL1Q8TD10 442 aa14.95□□□□□ -0.02
RTN4-202ENST00000337526 WHAMMQ8TF30 809 aa14.95□□□□□ -0.02
RTN4-202ENST00000337526 ABHD10Q9NUJ1 306 aa14.95□□□□□ -0.02
RTN4-202ENST00000337526 TMEM191BP0C7N4 346 aa14.95□□□□□ -0.02
RTN4-202ENST00000337526 C10orf76Q5T2E6 689 aa14.95□□□□□ -0.02
RTN4-202ENST00000337526 TCP11Q8WWU5 503 aa14.95□□□□□ -0.02
RTN4-202ENST00000337526 NACC1Q96RE7 527 aa14.95□□□□□ -0.02
RTN4-202ENST00000337526 ZNF577Q9BSK1 485 aa14.95□□□□□ -0.02
RTN4-202ENST00000337526 NUF2Q9BZD4 464 aa14.95□□□□□ -0.02
RTN4-202ENST00000337526 WDR11Q9BZH6 1224 aa14.95□□□□□ -0.02
RTN4-202ENST00000337526 STK36Q9NRP7 1315 aa14.95□□□□□ -0.02
RTN4-202ENST00000337526 NR1D1P20393 614 aa14.95□□□□□ -0.02
RTN4-202ENST00000337526 SLC12A2P55011 1212 aa14.95□□□□□ -0.02
RTN4-202ENST00000337526 MRPS25P82663 173 aaKnown RBP14.95□□□□□ -0.02
RTN4-202ENST00000337526 IL9RQ01113 521 aa14.95□□□□□ -0.02
RTN4-202ENST00000337526 LMNB2Q03252 620 aa14.95□□□□□ -0.02
RTN4-202ENST00000337526 TSGA10IPQ3SY00 556 aa14.95□□□□□ -0.02
RTN4-202ENST00000337526 BRIP1Q9BX63 1249 aa14.95□□□□□ -0.02
RTN4-202ENST00000337526 RPAP1Q9BWH6 1393 aaPredicted RBP14.95□□□□□ -0.02
RTN4-202ENST00000337526 PNPLA6Q8IY17 1366 aa14.94□□□□□ -0.02
RTN4-202ENST00000337526 TMOD1P28289 359 aa14.94□□□□□ -0.02
RTN4-202ENST00000337526 MAPK4P31152 587 aa14.94□□□□□ -0.02
RTN4-202ENST00000337526 ZKSCAN8Q15776 578 aaPredicted RBP14.94□□□□□ -0.02
RTN4-202ENST00000337526 SGO2Q562F6 1265 aa14.94□□□□□ -0.02
RTN4-202ENST00000337526 ALDH8A1Q9H2A2 487 aaPredicted RBP14.94□□□□□ -0.02
RTN4-202ENST00000337526 LGALS16A8MUM7 142 aa14.94□□□□□ -0.02
RTN4-202ENST00000337526 TNNC2P02585 160 aa14.94□□□□□ -0.02
RTN4-202ENST00000337526 HSPA6P17066 643 aa14.94□□□□□ -0.02
RTN4-202ENST00000337526 HLFQ16534 295 aa14.94□□□□□ -0.02
RTN4-202ENST00000337526 PPP4R1Q8TF05 950 aa14.94□□□□□ -0.02
RTN4-202ENST00000337526 PFDN4Q9NQP4 134 aa14.94□□□□□ -0.02
RTN4-202ENST00000337526 NOVA2Q9UNW9 492 aaKnown RBP14.94□□□□□ -0.02
RTN4-202ENST00000337526 ARHGAP31Q2M1Z3 1444 aa14.94□□□□□ -0.02
RTN4-202ENST00000337526 SORBS3O60504 671 aa14.94□□□□□ -0.02
RTN4-202ENST00000337526 POLGP54098 1239 aaPredicted RBP14.94□□□□□ -0.02
RTN4-202ENST00000337526 ADCY1Q08828 1119 aa14.94□□□□□ -0.02
RTN4-202ENST00000337526 PPP2R5CQ13362 524 aa14.94□□□□□ -0.02
RTN4-202ENST00000337526 CYP4F22Q6NT55 531 aa14.94□□□□□ -0.02
RTN4-202ENST00000337526 OXER1Q8TDS5 423 aa14.94□□□□□ -0.02
RTN4-202ENST00000337526 NFU1Q9UMS0 254 aa14.94□□□□□ -0.02
RTN4-202ENST00000337526 TACC3Q9Y6A5 838 aa14.94□□□□□ -0.02
RTN4-202ENST00000337526 NEDD4P46934 1319 aa14.94□□□□□ -0.02
RTN4-202ENST00000337526 WDR19Q8NEZ3 1342 aa14.94□□□□□ -0.02
RTN4-202ENST00000337526 TRIM49BA6NDI0 452 aa14.94□□□□□ -0.02
RTN4-202ENST00000337526 CDC27P30260 824 aa14.94□□□□□ -0.02
RTN4-202ENST00000337526 HAUS1Q96CS2 278 aa14.94□□□□□ -0.02
RTN4-202ENST00000337526 ZNF335Q9H4Z2 1342 aaPredicted RBP14.94□□□□□ -0.02
RTN4-202ENST00000337526 SLCO1A2P46721 670 aa14.93□□□□□ -0.02
RTN4-202ENST00000337526 SNX1Q13596 522 aa14.93□□□□□ -0.02
RTN4-202ENST00000337526 UBE2SQ16763 222 aa14.93□□□□□ -0.02
RTN4-202ENST00000337526 CFAP61Q8NHU2 1237 aa14.93□□□□□ -0.02
RTN4-202ENST00000337526 CSRNP1Q96S65 589 aa14.93□□□□□ -0.02
RTN4-202ENST00000337526 MMS19Q96T76 1030 aa14.93□□□□□ -0.02
RTN4-202ENST00000337526 PCIF1Q9H4Z3 704 aa14.93□□□□□ -0.02
RTN4-202ENST00000337526 ANKFY1Q9P2R3 1169 aa14.93□□□□□ -0.02
RTN4-202ENST00000337526 ECEL1O95672 775 aa14.93□□□□□ -0.02
RTN4-202ENST00000337526 HOXA7P31268 230 aaPredicted RBP14.93□□□□□ -0.02
RTN4-202ENST00000337526 TBC1D10BQ4KMP7 808 aaPredicted RBP14.93□□□□□ -0.02
RTN4-202ENST00000337526 RPUSD2Q8IZ73 545 aaKnown RBP14.93□□□□□ -0.02
RTN4-202ENST00000337526 FMO2Q99518 471 aa14.93□□□□□ -0.02
RTN4-202ENST00000337526 ADGRG1Q9Y653 693 aa14.93□□□□□ -0.02
RTN4-202ENST00000337526 SRGAP2O75044 1071 aa14.93□□□□□ -0.02
RTN4-202ENST00000337526 KCNQ4P56696 695 aa14.93□□□□□ -0.02
RTN4-202ENST00000337526 ARMC9Q7Z3E5 817 aa14.93□□□□□ -0.02
RTN4-202ENST00000337526 ANKRD35Q8N283 1001 aa14.93□□□□□ -0.02
RTN4-202ENST00000337526 AP1M1Q9BXS5 423 aa14.93□□□□□ -0.02
RTN4-202ENST00000337526 PARVGQ9HBI0 331 aa14.93□□□□□ -0.02
RTN4-202ENST00000337526 ZCCHC17Q9NP64 241 aaKnown RBP14.93□□□□□ -0.02
RTN4-202ENST00000337526 HESX1Q9UBX0 185 aa14.93□□□□□ -0.02
RTN4-202ENST00000337526 BCAP29Q9UHQ4 241 aa14.93□□□□□ -0.02
RTN4-202ENST00000337526 NOD1Q9Y239 953 aa14.93□□□□□ -0.02
RTN4-202ENST00000337526 CD2APQ9Y5K6 639 aa14.93□□□□□ -0.02
RTN4-202ENST00000337526 TEX33O43247 280 aa14.93□□□□□ -0.02
RTN4-202ENST00000337526 BBOX1O75936 387 aa14.93□□□□□ -0.02
RTN4-202ENST00000337526 PRCPP42785 496 aa14.93□□□□□ -0.02
RTN4-202ENST00000337526 CCDC117Q8IWD4 279 aaPredicted RBP14.93□□□□□ -0.02
RTN4-202ENST00000337526 NEK9Q8TD19 979 aa14.93□□□□□ -0.02
RTN4-202ENST00000337526 LY9Q9HBG7 655 aa14.93□□□□□ -0.02
RTN4-202ENST00000337526 SHROOM2Q13796 1616 aa14.93□□□□□ -0.02
RTN4-202ENST00000337526 CASQ2O14958 399 aaPredicted RBP14.92□□□□□ -0.02
RTN4-202ENST00000337526 BAG2O95816 211 aa14.92□□□□□ -0.02
RTN4-202ENST00000337526 CDK8P49336 464 aa14.92□□□□□ -0.02
RTN4-202ENST00000337526 SESN3P58005 492 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms