RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 GSDMBQ8TAX9 411 aa14.43□□□□□ -0.1
COL2A1-201ENST00000337299 DHTKD1Q96HY7 919 aaPredicted RBP14.43□□□□□ -0.1
COL2A1-201ENST00000337299 USP17L12C9JPN9 530 aa14.43□□□□□ -0.1
COL2A1-201ENST00000337299 USP17L21D6R901 530 aa14.43□□□□□ -0.1
COL2A1-201ENST00000337299 SCTRP47872 440 aa14.43□□□□□ -0.1
COL2A1-201ENST00000337299 TMCO4Q5TGY1 634 aa14.43□□□□□ -0.1
COL2A1-201ENST00000337299 PHLDB2Q86SQ0 1253 aa14.43□□□□□ -0.1
COL2A1-201ENST00000337299 GOLPH3Q9H4A6 298 aa14.43□□□□□ -0.1
COL2A1-201ENST00000337299 GOLGA8HP0CJ92 632 aa14.43□□□□□ -0.1
COL2A1-201ENST00000337299 MYBL2P10244 700 aa14.43□□□□□ -0.1
COL2A1-201ENST00000337299 ADCY8P40145 1251 aa14.43□□□□□ -0.1
COL2A1-201ENST00000337299 DRP2Q13474 957 aa14.43□□□□□ -0.1
COL2A1-201ENST00000337299 CUL1Q13616 776 aa14.43□□□□□ -0.1
COL2A1-201ENST00000337299 TRIP13Q15645 432 aaPredicted RBP14.43□□□□□ -0.1
COL2A1-201ENST00000337299 LRRC8CQ8TDW0 803 aa14.43□□□□□ -0.1
COL2A1-201ENST00000337299 BIN2Q9UBW5 565 aaPredicted RBP14.43□□□□□ -0.1
COL2A1-201ENST00000337299 PLEKP08567 350 aaPredicted RBP14.42□□□□□ -0.1
COL2A1-201ENST00000337299 TROVE2P10155 538 aaKnown RBP eCLIP14.42□□□□□ -0.1
COL2A1-201ENST00000337299 HSPA1LP34931 641 aa14.42□□□□□ -0.1
COL2A1-201ENST00000337299 LONP1P36776 959 aaKnown RBP14.42□□□□□ -0.1
COL2A1-201ENST00000337299 RCN2Q14257 317 aa14.42□□□□□ -0.1
COL2A1-201ENST00000337299 USPL1Q5W0Q7 1092 aa14.42□□□□□ -0.1
COL2A1-201ENST00000337299 RILPQ96NA2 401 aa14.42□□□□□ -0.1
COL2A1-201ENST00000337299 NUDCD1Q96RS6 583 aa14.42□□□□□ -0.1
COL2A1-201ENST00000337299 THAP9Q9H5L6 903 aa14.42□□□□□ -0.1
COL2A1-201ENST00000337299 SENP2Q9HC62 589 aa14.42□□□□□ -0.1
COL2A1-201ENST00000337299 CREB3O43889 395 aa14.42□□□□□ -0.1
COL2A1-201ENST00000337299 CD44P16070 742 aaKnown RBP14.42□□□□□ -0.1
COL2A1-201ENST00000337299 RWDD2BP57060 319 aa14.42□□□□□ -0.1
COL2A1-201ENST00000337299 KCNB1Q14721 858 aa14.42□□□□□ -0.1
COL2A1-201ENST00000337299 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.42□□□□□ -0.1
COL2A1-201ENST00000337299 RTCBQ9Y3I0 505 aaKnown RBP14.42□□□□□ -0.1
COL2A1-201ENST00000337299 RPL13P26373 211 aaKnown RBP14.42□□□□□ -0.1
COL2A1-201ENST00000337299 EIF6P56537 245 aaKnown RBP14.42□□□□□ -0.1
COL2A1-201ENST00000337299 ARHGAP24Q8N264 748 aa14.42□□□□□ -0.1
COL2A1-201ENST00000337299 HPS3Q969F9 1004 aa14.42□□□□□ -0.1
COL2A1-201ENST00000337299 IQCDQ96DY2 449 aa14.42□□□□□ -0.1
COL2A1-201ENST00000337299 PRMT1Q99873 361 aaKnown RBP14.42□□□□□ -0.1
COL2A1-201ENST00000337299 USTQ9Y2C2 406 aa14.42□□□□□ -0.1
COL2A1-201ENST00000337299 FAM13AO94988 1023 aa14.41□□□□□ -0.1
COL2A1-201ENST00000337299 PLEKHA8P1O95397 391 aa14.41□□□□□ -0.1
COL2A1-201ENST00000337299 IFNB1P01574 187 aa14.41□□□□□ -0.1
COL2A1-201ENST00000337299 ZNF211Q13398 564 aaPredicted RBP14.41□□□□□ -0.1
COL2A1-201ENST00000337299 MESDQ14696 234 aa14.41□□□□□ -0.1
COL2A1-201ENST00000337299 CALCRLQ16602 461 aa14.41□□□□□ -0.1
COL2A1-201ENST00000337299 TPTE2Q6XPS3 522 aa14.41□□□□□ -0.1
COL2A1-201ENST00000337299 FBXO41Q8TF61 875 aa14.41□□□□□ -0.1
COL2A1-201ENST00000337299 ZSCAN10Q96SZ4 725 aaPredicted RBP14.41□□□□□ -0.1
COL2A1-201ENST00000337299 CAPN11Q9UMQ6 739 aa14.41□□□□□ -0.1
COL2A1-201ENST00000337299 CAPN6Q9Y6Q1 641 aa14.41□□□□□ -0.1
COL2A1-201ENST00000337299 CYP27B1O15528 508 aa14.41□□□□□ -0.1
COL2A1-201ENST00000337299 CHN1P15882 459 aa14.41□□□□□ -0.1
COL2A1-201ENST00000337299 DR1Q01658 176 aa14.41□□□□□ -0.1
COL2A1-201ENST00000337299 ADAM9Q13443 819 aa14.41□□□□□ -0.1
COL2A1-201ENST00000337299 KCTD19Q17RG1 926 aaPredicted RBP14.41□□□□□ -0.1
COL2A1-201ENST00000337299 RNF26Q9BY78 433 aaPredicted RBP14.41□□□□□ -0.1
COL2A1-201ENST00000337299 PITPNM3Q9BZ71 974 aa14.41□□□□□ -0.1
COL2A1-201ENST00000337299 TXLNGQ9NUQ3 528 aa14.41□□□□□ -0.1
COL2A1-201ENST00000337299 PARP2Q9UGN5 583 aa14.41□□□□□ -0.1
COL2A1-201ENST00000337299 ARMCX3Q9UH62 379 aaPredicted RBP14.41□□□□□ -0.1
COL2A1-201ENST00000337299 DENND2AQ9ULE3 1009 aa14.41□□□□□ -0.1
COL2A1-201ENST00000337299 MADDQ8WXG6 1647 aa14.41□□□□□ -0.1
COL2A1-201ENST00000337299 SOS2Q07890 1332 aaPredicted RBP14.41□□□□□ -0.1
COL2A1-201ENST00000337299 PLCG1P19174 1290 aa14.41□□□□□ -0.1
COL2A1-201ENST00000337299 CTCFP49711 727 aaPredicted RBP14.41□□□□□ -0.1
COL2A1-201ENST00000337299 MKRN4PQ13434 485 aaPredicted RBP14.41□□□□□ -0.1
COL2A1-201ENST00000337299 NBPF10Q6P3W6 841 aaKnown RBP14.41□□□□□ -0.1
COL2A1-201ENST00000337299 SUDS3Q9H7L9 328 aaPredicted RBP14.41□□□□□ -0.1
COL2A1-201ENST00000337299 INTS13Q9NVM9 706 aa14.41□□□□□ -0.1
COL2A1-201ENST00000337299 CYP2D7A0A087X1C5 515 aa14.41□□□□□ -0.1
COL2A1-201ENST00000337299 CCT8L1PA6NM43 557 aa14.41□□□□□ -0.1
COL2A1-201ENST00000337299 KIF3CO14782 793 aa14.41□□□□□ -0.1
COL2A1-201ENST00000337299 XRCC5P13010 732 aaKnown RBP14.41□□□□□ -0.1
COL2A1-201ENST00000337299 TMED2Q15363 201 aa14.41□□□□□ -0.1
COL2A1-201ENST00000337299 ERMNQ8TAM6 284 aa14.41□□□□□ -0.1
COL2A1-201ENST00000337299 PPP1R9AQ9ULJ8 1098 aa14.41□□□□□ -0.1
COL2A1-201ENST00000337299 IGF2BP3O00425 579 aaKnown RBP eCLIP14.4□□□□□ -0.1
COL2A1-201ENST00000337299 RAD51CO43502 376 aa14.4□□□□□ -0.1
COL2A1-201ENST00000337299 CNGA1P29973 690 aa14.4□□□□□ -0.1
COL2A1-201ENST00000337299 IL9RQ01113 521 aa14.4□□□□□ -0.1
COL2A1-201ENST00000337299 ILDR1Q86SU0 546 aaPredicted RBP14.4□□□□□ -0.1
COL2A1-201ENST00000337299 TSEN2Q8NCE0 465 aaKnown RBP14.4□□□□□ -0.1
COL2A1-201ENST00000337299 DDX12PQ92771 950 aa14.4□□□□□ -0.1
COL2A1-201ENST00000337299 FGD4Q96M96 766 aa14.4□□□□□ -0.1
COL2A1-201ENST00000337299 NBPF3Q9H094 633 aa14.4□□□□□ -0.1
COL2A1-201ENST00000337299 DLGAP2Q9P1A6 1054 aa14.4□□□□□ -0.1
COL2A1-201ENST00000337299 FAF1Q9UNN5 650 aaPredicted RBP14.4□□□□□ -0.1
COL2A1-201ENST00000337299 SLC4A7Q9Y6M7 1214 aa14.4□□□□□ -0.1
COL2A1-201ENST00000337299 NEDD4P46934 1319 aa14.4□□□□□ -0.1
COL2A1-201ENST00000337299 CDK12Q9NYV4 1490 aaPredicted RBP14.4□□□□□ -0.1
COL2A1-201ENST00000337299 ALKQ9UM73 1620 aa14.4□□□□□ -0.1
COL2A1-201ENST00000337299 OPLAHO14841 1288 aa14.4□□□□□ -0.1
COL2A1-201ENST00000337299 OR52Z1P0C646 297 aa14.4□□□□□ -0.1
COL2A1-201ENST00000337299 ALKBH5Q6P6C2 394 aaKnown RBP14.4□□□□□ -0.1
COL2A1-201ENST00000337299 BRINP3Q76B58 766 aa14.4□□□□□ -0.1
COL2A1-201ENST00000337299 HOOK2Q96ED9 719 aa14.4□□□□□ -0.1
COL2A1-201ENST00000337299 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.4□□□□□ -0.1
COL2A1-201ENST00000337299 SAP30BPQ9UHR5 308 aaKnown RBP14.4□□□□□ -0.1
COL2A1-201ENST00000337299 CFAP73A6NFT4 308 aa14.4□□□□□ -0.1
COL2A1-201ENST00000337299 TCP11X1B4DZS4 312 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms