RNA–Protein interactions for RNA: ENST00000337138.8

HIF1A-202, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HIF1A, Length 3,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-202ENST00000337138 NCAPGQ9BPX3 1015 aa11.18□□□□□ -0.62
HIF1A-202ENST00000337138 GOLPH3Q9H4A6 298 aa11.18□□□□□ -0.62
HIF1A-202ENST00000337138 SRP68Q9UHB9 627 aaKnown RBP11.18□□□□□ -0.62
HIF1A-202ENST00000337138 HPCAL4Q9UM19 191 aa11.18□□□□□ -0.62
HIF1A-202ENST00000337138 SIK3Q9Y2K2 1263 aa11.18□□□□□ -0.62
HIF1A-202ENST00000337138 POTEMA6NI47 508 aa11.18□□□□□ -0.62
HIF1A-202ENST00000337138 TMCO5BA8MYB1 307 aa11.18□□□□□ -0.62
HIF1A-202ENST00000337138 RXRBP28702 533 aa11.18□□□□□ -0.62
HIF1A-202ENST00000337138 FIGNQ5HY92 759 aa11.18□□□□□ -0.62
HIF1A-202ENST00000337138 TCERG1LQ5VWI1 586 aa11.18□□□□□ -0.62
HIF1A-202ENST00000337138 IQCEQ6IPM2 695 aa11.18□□□□□ -0.62
HIF1A-202ENST00000337138 TADA2BQ86TJ2 420 aa11.18□□□□□ -0.62
HIF1A-202ENST00000337138 CCDC114Q96M63 670 aa11.18□□□□□ -0.62
HIF1A-202ENST00000337138 MPHOSPH10O00566 681 aaKnown RBP11.17□□□□□ -0.62
HIF1A-202ENST00000337138 HSF2BPO75031 334 aa11.17□□□□□ -0.62
HIF1A-202ENST00000337138 MYCNP04198 464 aaPredicted RBP11.17□□□□□ -0.62
HIF1A-202ENST00000337138 CALRP27797 417 aaKnown RBP11.17□□□□□ -0.62
HIF1A-202ENST00000337138 GRM1Q13255 1194 aa11.17□□□□□ -0.62
HIF1A-202ENST00000337138 GRM4Q14833 912 aa11.17□□□□□ -0.62
HIF1A-202ENST00000337138 FBXW10Q5XX13 1052 aa11.17□□□□□ -0.62
HIF1A-202ENST00000337138 PTF1AQ7RTS3 328 aa11.17□□□□□ -0.62
HIF1A-202ENST00000337138 KIAA0895Q8NCT3 520 aa11.17□□□□□ -0.62
HIF1A-202ENST00000337138 SH3RF3Q8TEJ3 882 aaPredicted RBP11.17□□□□□ -0.62
HIF1A-202ENST00000337138 MTMR9Q96QG7 549 aa11.17□□□□□ -0.62
HIF1A-202ENST00000337138 NENFQ9UMX5 172 aa11.17□□□□□ -0.62
HIF1A-202ENST00000337138 CNTNAP4Q9C0A0 1308 aa11.17□□□□□ -0.62
HIF1A-202ENST00000337138 EPHB6O15197 1021 aa11.17□□□□□ -0.62
HIF1A-202ENST00000337138 PRPHP41219 470 aa11.17□□□□□ -0.62
HIF1A-202ENST00000337138 GUCY2DQ02846 1103 aa11.17□□□□□ -0.62
HIF1A-202ENST00000337138 PPP2R5AQ15172 486 aa11.17□□□□□ -0.62
HIF1A-202ENST00000337138 C12orf60Q5U649 245 aa11.17□□□□□ -0.62
HIF1A-202ENST00000337138 TBCKQ8TEA7 893 aa11.17□□□□□ -0.62
HIF1A-202ENST00000337138 MED4Q9NPJ6 270 aa11.17□□□□□ -0.62
HIF1A-202ENST00000337138 SALL4Q9UJQ4 1053 aa11.17□□□□□ -0.62
HIF1A-202ENST00000337138 ZNF652Q9Y2D9 606 aa11.17□□□□□ -0.62
HIF1A-202ENST00000337138 FER1L6Q2WGJ9 1857 aa11.17□□□□□ -0.62
HIF1A-202ENST00000337138 LRRC53A6NM62 1247 aa11.17□□□□□ -0.62
HIF1A-202ENST00000337138 BACH1O14867 736 aa11.17□□□□□ -0.62
HIF1A-202ENST00000337138 KRT14P02533 472 aa11.17□□□□□ -0.62
HIF1A-202ENST00000337138 PDE6BP35913 854 aa11.17□□□□□ -0.62
HIF1A-202ENST00000337138 KIF11P52732 1056 aa11.17□□□□□ -0.62
HIF1A-202ENST00000337138 RPS8P62241 208 aaKnown RBP11.17□□□□□ -0.62
HIF1A-202ENST00000337138 TUBB2AQ13885 445 aa11.17□□□□□ -0.62
HIF1A-202ENST00000337138 MCTP2Q6DN12 878 aa11.17□□□□□ -0.62
HIF1A-202ENST00000337138 FOXR2Q6PJQ5 311 aa11.17□□□□□ -0.62
HIF1A-202ENST00000337138 MMS22LQ6ZRQ5 1243 aa11.17□□□□□ -0.62
HIF1A-202ENST00000337138 EP400NLQ6ZTU2 488 aa11.17□□□□□ -0.62
HIF1A-202ENST00000337138 C15orf52Q6ZUT6 534 aaKnown RBP11.17□□□□□ -0.62
HIF1A-202ENST00000337138 TAX1BP1Q86VP1 789 aa11.17□□□□□ -0.62
HIF1A-202ENST00000337138 EFCAB13Q8IY85 973 aa11.17□□□□□ -0.62
HIF1A-202ENST00000337138 GLIS3Q8NEA6 775 aa11.17□□□□□ -0.62
HIF1A-202ENST00000337138 NLRP3Q96P20 1036 aa11.17□□□□□ -0.62
HIF1A-202ENST00000337138 TUBB2BQ9BVA1 445 aa11.17□□□□□ -0.62
HIF1A-202ENST00000337138 THRAP3Q9Y2W1 955 aaKnown RBP11.17□□□□□ -0.62
HIF1A-202ENST00000337138 PCDHA13Q9Y5I0 950 aa11.17□□□□□ -0.62
HIF1A-202ENST00000337138 NEBLO76041 1014 aa11.16□□□□□ -0.62
HIF1A-202ENST00000337138 LDHBP07195 334 aaKnown RBP11.16□□□□□ -0.62
HIF1A-202ENST00000337138 OR52Z1P0C646 297 aa11.16□□□□□ -0.62
HIF1A-202ENST00000337138 EEF1GP26641 437 aaKnown RBP11.16□□□□□ -0.62
HIF1A-202ENST00000337138 SV2BQ7L1I2 683 aa11.16□□□□□ -0.62
HIF1A-202ENST00000337138 CREG2Q8IUH2 290 aa11.16□□□□□ -0.62
HIF1A-202ENST00000337138 LRRC47Q8N1G4 583 aaKnown RBP11.16□□□□□ -0.62
HIF1A-202ENST00000337138 PIGSQ96S52 555 aa11.16□□□□□ -0.62
HIF1A-202ENST00000337138 TRIM31Q9BZY9 425 aa11.16□□□□□ -0.62
HIF1A-202ENST00000337138 NFU1Q9UMS0 254 aa11.16□□□□□ -0.62
HIF1A-202ENST00000337138 PCDHA2Q9Y5H9 948 aa11.16□□□□□ -0.62
HIF1A-202ENST00000337138 SCN9AQ15858 1988 aa11.16□□□□□ -0.62
HIF1A-202ENST00000337138 A0A1W2PQJ5 194 aa11.16□□□□□ -0.62
HIF1A-202ENST00000337138 BICDL2A1A5D9 508 aa11.16□□□□□ -0.62
HIF1A-202ENST00000337138 ZBED6P86452 979 aa11.16□□□□□ -0.62
HIF1A-202ENST00000337138 NONOQ15233 471 aaKnown RBP eCLIP11.16□□□□□ -0.62
HIF1A-202ENST00000337138 BARGINQ6ZT62 677 aa11.16□□□□□ -0.62
HIF1A-202ENST00000337138 ADAT2Q7Z6V5 191 aaKnown RBP11.16□□□□□ -0.62
HIF1A-202ENST00000337138 PACS2Q86VP3 889 aa11.16□□□□□ -0.62
HIF1A-202ENST00000337138 POTEDQ86YR6 584 aa11.16□□□□□ -0.62
HIF1A-202ENST00000337138 SNX29Q8TEQ0 813 aa11.16□□□□□ -0.62
HIF1A-202ENST00000337138 SH3GL2Q99962 352 aa11.16□□□□□ -0.62
HIF1A-202ENST00000337138 PYM1Q9BRP8 204 aaKnown RBP11.16□□□□□ -0.62
HIF1A-202ENST00000337138 VIPAS39Q9H9C1 493 aa11.16□□□□□ -0.62
HIF1A-202ENST00000337138 SEPT11Q9NVA2 429 aaKnown RBP11.16□□□□□ -0.62
HIF1A-202ENST00000337138 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.16□□□□□ -0.62
HIF1A-202ENST00000337138 A0A087WUV0 522 aaPredicted RBP11.16□□□□□ -0.62
HIF1A-202ENST00000337138 PRPF4BQ13523 1007 aaKnown RBP11.16□□□□□ -0.62
HIF1A-202ENST00000337138 ZCWPW2Q504Y3 356 aa11.16□□□□□ -0.62
HIF1A-202ENST00000337138 MICALCLQ6ZW33 695 aa11.16□□□□□ -0.62
HIF1A-202ENST00000337138 FAM114A1Q8IWE2 563 aa11.16□□□□□ -0.62
HIF1A-202ENST00000337138 CAPS2Q9BXY5 557 aa11.16□□□□□ -0.62
HIF1A-202ENST00000337138 ZMYND12Q9H0C1 365 aa11.16□□□□□ -0.62
HIF1A-202ENST00000337138 EPB41L5Q9HCM4 733 aa11.16□□□□□ -0.62
HIF1A-202ENST00000337138 RBAK-RBAKDNI3L0D1 243 aa11.16□□□□□ -0.62
HIF1A-202ENST00000337138 CLGNO14967 610 aa11.16□□□□□ -0.62
HIF1A-202ENST00000337138 PPFIA4O75335 1185 aa11.16□□□□□ -0.62
HIF1A-202ENST00000337138 CLK2P49760 499 aaKnown RBP11.16□□□□□ -0.62
HIF1A-202ENST00000337138 POLR2FP61218 127 aaKnown RBP11.16□□□□□ -0.62
HIF1A-202ENST00000337138 AMPD3Q01432 767 aa11.16□□□□□ -0.62
HIF1A-202ENST00000337138 EMC10Q5UCC4 262 aa11.16□□□□□ -0.62
HIF1A-202ENST00000337138 CCDC43Q96MW1 224 aaKnown RBP11.16□□□□□ -0.62
HIF1A-202ENST00000337138 KRT12Q99456 494 aa11.16□□□□□ -0.62
HIF1A-202ENST00000337138 SEMA6BQ9H3T3 888 aa11.16□□□□□ -0.62
HIF1A-202ENST00000337138 THAP9Q9H5L6 903 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms