RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 CTAGE3PQ8IX95 158 aa13.31□□□□□ -0.28
FN1-202ENST00000336916 SLC38A10Q9HBR0 1119 aa13.31□□□□□ -0.28
FN1-202ENST00000336916 TOPORSQ9NS56 1045 aaPredicted RBP13.31□□□□□ -0.28
FN1-202ENST00000336916 RIMS1Q86UR5 1692 aaKnown RBP13.31□□□□□ -0.28
FN1-202ENST00000336916 RCAN1P53805 252 aa13.31□□□□□ -0.28
FN1-202ENST00000336916 SYDE2Q5VT97 1194 aa13.31□□□□□ -0.28
FN1-202ENST00000336916 TUBB6Q9BUF5 446 aa13.31□□□□□ -0.28
FN1-202ENST00000336916 RPF1Q9H9Y2 349 aaKnown RBP13.31□□□□□ -0.28
FN1-202ENST00000336916 IFNB1P01574 187 aa13.3□□□□□ -0.28
FN1-202ENST00000336916 CDC25BP30305 580 aa13.3□□□□□ -0.28
FN1-202ENST00000336916 AP3B2Q13367 1082 aa13.3□□□□□ -0.28
FN1-202ENST00000336916 CBX8Q9HC52 389 aa13.3□□□□□ -0.28
FN1-202ENST00000336916 STAP2Q9UGK3 403 aa13.3□□□□□ -0.28
FN1-202ENST00000336916 PPP1R18Q6NYC8 613 aa13.3□□□□□ -0.28
FN1-202ENST00000336916 KIAA1024Q9UPX6 916 aa13.3□□□□□ -0.28
FN1-202ENST00000336916 PNMA6FA0A0J9YX94 578 aa13.3□□□□□ -0.28
FN1-202ENST00000336916 IPO5O00410 1097 aaKnown RBP13.3□□□□□ -0.28
FN1-202ENST00000336916 FMNL1O95466 1100 aaPredicted RBP13.3□□□□□ -0.28
FN1-202ENST00000336916 SCYL2Q6P3W7 929 aa13.3□□□□□ -0.28
FN1-202ENST00000336916 SCYL1Q96KG9 808 aa13.3□□□□□ -0.28
FN1-202ENST00000336916 TTC4O95801 387 aa13.3□□□□□ -0.28
FN1-202ENST00000336916 SEPT14Q6ZU15 432 aa13.3□□□□□ -0.28
FN1-202ENST00000336916 EFHD1Q9BUP0 239 aa13.3□□□□□ -0.28
FN1-202ENST00000336916 USP44Q9H0E7 712 aa13.3□□□□□ -0.28
FN1-202ENST00000336916 PREX1Q8TCU6 1659 aa13.3□□□□□ -0.28
FN1-202ENST00000336916 M0R2C6 588 aa13.3□□□□□ -0.28
FN1-202ENST00000336916 SERPINB2P05120 415 aa13.3□□□□□ -0.28
FN1-202ENST00000336916 ZNF212Q9UDV6 495 aa13.3□□□□□ -0.28
FN1-202ENST00000336916 RFX7Q2KHR2 1363 aa13.3□□□□□ -0.28
FN1-202ENST00000336916 PPLO60437 1756 aa13.3□□□□□ -0.28
FN1-202ENST00000336916 INO80B-WBP1J3KQ70 363 aa13.3□□□□□ -0.28
FN1-202ENST00000336916 MECOMQ03112 1051 aa13.3□□□□□ -0.28
FN1-202ENST00000336916 CCDC38Q502W7 563 aa13.3□□□□□ -0.28
FN1-202ENST00000336916 CCDC13Q8IYE1 715 aa13.3□□□□□ -0.28
FN1-202ENST00000336916 INPP5BP32019 993 aa13.29□□□□□ -0.28
FN1-202ENST00000336916 BCAMP50895 628 aa13.29□□□□□ -0.28
FN1-202ENST00000336916 FAM47AQ5JRC9 791 aa13.29□□□□□ -0.28
FN1-202ENST00000336916 FBXO18Q8NFZ0 1043 aa13.29□□□□□ -0.28
FN1-202ENST00000336916 U2AF1L4Q8WU68 220 aaKnown RBP13.29□□□□□ -0.28
FN1-202ENST00000336916 PIM2Q9P1W9 311 aa13.29□□□□□ -0.28
FN1-202ENST00000336916 ARHGEF40Q8TER5 1519 aa13.29□□□□□ -0.28
FN1-202ENST00000336916 IQCA1LA6NCM1 817 aa13.29□□□□□ -0.28
FN1-202ENST00000336916 TMEM247A6NEH6 219 aa13.29□□□□□ -0.28
FN1-202ENST00000336916 IFNA8P32881 189 aa13.29□□□□□ -0.28
FN1-202ENST00000336916 PRKG1Q13976 671 aa13.29□□□□□ -0.28
FN1-202ENST00000336916 H2AFZP0C0S5 128 aa13.29□□□□□ -0.28
FN1-202ENST00000336916 GYG1P46976 350 aa13.29□□□□□ -0.28
FN1-202ENST00000336916 H2AFVQ71UI9 128 aa13.29□□□□□ -0.28
FN1-202ENST00000336916 CABS1Q96KC9 395 aa13.29□□□□□ -0.28
FN1-202ENST00000336916 HPCAL4Q9UM19 191 aa13.29□□□□□ -0.28
FN1-202ENST00000336916 CTNNA1P35221 906 aaKnown RBP13.29□□□□□ -0.28
FN1-202ENST00000336916 RAD51AP2Q09MP3 1159 aa13.29□□□□□ -0.28
FN1-202ENST00000336916 ZMYM1Q5SVZ6 1142 aa13.29□□□□□ -0.28
FN1-202ENST00000336916 FAM71BQ8TC56 605 aa13.29□□□□□ -0.28
FN1-202ENST00000336916 PBKQ96KB5 322 aa13.29□□□□□ -0.28
FN1-202ENST00000336916 TAB2Q9NYJ8 693 aa13.29□□□□□ -0.28
FN1-202ENST00000336916 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.29□□□□□ -0.28
FN1-202ENST00000336916 KCNK3O14649 394 aa13.29□□□□□ -0.28
FN1-202ENST00000336916 IRX5P78411 483 aaPredicted RBP13.29□□□□□ -0.28
FN1-202ENST00000336916 AFPP02771 609 aaKnown RBP13.29□□□□□ -0.28
FN1-202ENST00000336916 PROM2Q8N271 834 aa13.29□□□□□ -0.28
FN1-202ENST00000336916 PLA2R1Q13018 1463 aa13.29□□□□□ -0.28
FN1-202ENST00000336916 TULP4Q9NRJ4 1543 aa13.29□□□□□ -0.28
FN1-202ENST00000336916 MMEL1Q495T6 779 aa13.29□□□□□ -0.28
FN1-202ENST00000336916 SDR42E1Q8WUS8 393 aa13.29□□□□□ -0.28
FN1-202ENST00000336916 CIAPIN1Q6FI81 312 aa13.28□□□□□ -0.28
FN1-202ENST00000336916 KRBA2Q6ZNG9 492 aa13.28□□□□□ -0.28
FN1-202ENST00000336916 FASTKD5Q7L8L6 764 aaKnown RBP13.28□□□□□ -0.28
FN1-202ENST00000336916 PCGF5Q86SE9 256 aa13.28□□□□□ -0.28
FN1-202ENST00000336916 KCNJ14Q9UNX9 436 aa13.28□□□□□ -0.28
FN1-202ENST00000336916 WDR19Q8NEZ3 1342 aa13.28□□□□□ -0.28
FN1-202ENST00000336916 SLC26A4O43511 780 aa13.28□□□□□ -0.28
FN1-202ENST00000336916 ATP6V1E1P36543 226 aa13.28□□□□□ -0.28
FN1-202ENST00000336916 DEUP1Q05D60 604 aa13.28□□□□□ -0.28
FN1-202ENST00000336916 MAGEB5Q9BZ81 275 aa13.28□□□□□ -0.28
FN1-202ENST00000336916 CPSF2Q9P2I0 782 aaKnown RBP13.28□□□□□ -0.28
FN1-202ENST00000336916 ANGPTL3Q9Y5C1 460 aa13.28□□□□□ -0.28
FN1-202ENST00000336916 NRKQ7Z2Y5 1582 aa13.28□□□□□ -0.28
FN1-202ENST00000336916 RNF219Q5W0B1 726 aaPredicted RBP13.28□□□□□ -0.28
FN1-202ENST00000336916 DDX50Q9BQ39 737 aaKnown RBP13.28□□□□□ -0.28
FN1-202ENST00000336916 FEM1BQ9UK73 627 aa13.28□□□□□ -0.28
FN1-202ENST00000336916 DIS3Q9Y2L1 958 aaKnown RBP13.28□□□□□ -0.28
FN1-202ENST00000336916 ALKQ9UM73 1620 aa13.28□□□□□ -0.28
FN1-202ENST00000336916 PPP2R5CQ13362 524 aa13.28□□□□□ -0.28
FN1-202ENST00000336916 E2F5Q15329 346 aa13.28□□□□□ -0.28
FN1-202ENST00000336916 CARD6Q9BX69 1037 aa13.28□□□□□ -0.28
FN1-202ENST00000336916 NR2F2P24468 414 aa13.28□□□□□ -0.28
FN1-202ENST00000336916 GRAPQ13588 217 aa13.28□□□□□ -0.28
FN1-202ENST00000336916 GRAPLQ8TC17 118 aaPredicted RBP13.28□□□□□ -0.28
FN1-202ENST00000336916 NEK9Q8TD19 979 aa13.28□□□□□ -0.28
FN1-202ENST00000336916 SEPT10Q9P0V9 454 aa13.28□□□□□ -0.28
FN1-202ENST00000336916 STRIP2Q9ULQ0 834 aa13.28□□□□□ -0.28
FN1-202ENST00000336916 SCNN1DP51172 638 aa13.28□□□□□ -0.28
FN1-202ENST00000336916 COG7P83436 770 aa13.28□□□□□ -0.28
FN1-202ENST00000336916 KRT24Q2M2I5 525 aa13.28□□□□□ -0.28
FN1-202ENST00000336916 NELFCDQ8IXH7 590 aa13.28□□□□□ -0.28
FN1-202ENST00000336916 FARP1Q9Y4F1 1045 aaPredicted RBP13.28□□□□□ -0.28
FN1-202ENST00000336916 MAN2A1Q16706 1144 aa13.28□□□□□ -0.28
FN1-202ENST00000336916 PDXDC2PQ6P474 469 aa13.28□□□□□ -0.28
FN1-202ENST00000336916 SIX6OS1Q8N1H7 587 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms