RNA–Protein interactions for RNA: ENST00000336708.11

TRIM16-201, Transcript of tripartite motif containing 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM16, Length 2,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM16-201ENST00000336708 TUBB2BQ9BVA1 445 aa10.87□□□□□ -0.67
TRIM16-201ENST00000336708 PCDHA12Q9UN75 941 aa10.87□□□□□ -0.67
TRIM16-201ENST00000336708 COL4A5P29400 1685 aa10.86□□□□□ -0.67
TRIM16-201ENST00000336708 B4DLN1 442 aa10.86□□□□□ -0.67
TRIM16-201ENST00000336708 USP17L15C9J2P7 530 aa10.86□□□□□ -0.67
TRIM16-201ENST00000336708 USP17L13C9JLJ4 530 aa10.86□□□□□ -0.67
TRIM16-201ENST00000336708 USP17L11C9JVI0 530 aa10.86□□□□□ -0.67
TRIM16-201ENST00000336708 USP17L18D6R9N7 530 aa10.86□□□□□ -0.67
TRIM16-201ENST00000336708 USP17L22D6RA61 530 aa10.86□□□□□ -0.67
TRIM16-201ENST00000336708 USP17L17D6RBQ6 530 aa10.86□□□□□ -0.67
TRIM16-201ENST00000336708 USP17L19D6RCP7 530 aa10.86□□□□□ -0.67
TRIM16-201ENST00000336708 USP17L20D6RJB6 530 aa10.86□□□□□ -0.67
TRIM16-201ENST00000336708 NDUFB10O96000 172 aa10.86□□□□□ -0.67
TRIM16-201ENST00000336708 SPIRE1Q08AE8 756 aa10.86□□□□□ -0.67
TRIM16-201ENST00000336708 USP17L24Q0WX57 530 aa10.86□□□□□ -0.67
TRIM16-201ENST00000336708 ICE2Q659A1 982 aa10.86□□□□□ -0.67
TRIM16-201ENST00000336708 USP17L6PQ6QN14 398 aa10.86□□□□□ -0.67
TRIM16-201ENST00000336708 MNS1Q8NEH6 495 aa10.86□□□□□ -0.67
TRIM16-201ENST00000336708 ETNPPLQ8TBG4 499 aa10.86□□□□□ -0.67
TRIM16-201ENST00000336708 PRMT6Q96LA8 375 aaPredicted RBP10.86□□□□□ -0.67
TRIM16-201ENST00000336708 AMNQ9BXJ7 453 aa10.86□□□□□ -0.67
TRIM16-201ENST00000336708 TDRD3Q9H7E2 651 aaKnown RBP10.86□□□□□ -0.67
TRIM16-201ENST00000336708 SLC39A2Q9NP94 309 aa10.86□□□□□ -0.67
TRIM16-201ENST00000336708 HERC5Q9UII4 1024 aaKnown RBP10.86□□□□□ -0.67
TRIM16-201ENST00000336708 LUC7L2Q9Y383 392 aaKnown RBP10.86□□□□□ -0.67
TRIM16-201ENST00000336708 REXO2Q9Y3B8 237 aaKnown RBP10.86□□□□□ -0.67
TRIM16-201ENST00000336708 PCDHA2Q9Y5H9 948 aa10.86□□□□□ -0.67
TRIM16-201ENST00000336708 EN1Q05925 392 aaPredicted RBP10.86□□□□□ -0.67
TRIM16-201ENST00000336708 ZCWPW2Q504Y3 356 aa10.86□□□□□ -0.67
TRIM16-201ENST00000336708 SYDE2Q5VT97 1194 aa10.86□□□□□ -0.67
TRIM16-201ENST00000336708 SLFN12Q8IYM2 578 aa10.86□□□□□ -0.67
TRIM16-201ENST00000336708 ACRBPQ8NEB7 543 aa10.86□□□□□ -0.67
TRIM16-201ENST00000336708 HPS3Q969F9 1004 aa10.86□□□□□ -0.67
TRIM16-201ENST00000336708 GMLQ99445 158 aa10.86□□□□□ -0.67
TRIM16-201ENST00000336708 CARD6Q9BX69 1037 aa10.86□□□□□ -0.67
TRIM16-201ENST00000336708 FRMD3A2A2Y4 597 aa10.85□□□□□ -0.67
TRIM16-201ENST00000336708 PIK3CDO00329 1044 aa10.85□□□□□ -0.67
TRIM16-201ENST00000336708 NDUFA10O95299 355 aa10.85□□□□□ -0.67
TRIM16-201ENST00000336708 CIITAP33076 1130 aa10.85□□□□□ -0.67
TRIM16-201ENST00000336708 SREBF1P36956 1147 aa10.85□□□□□ -0.67
TRIM16-201ENST00000336708 LRRC55Q6ZSA7 311 aa10.85□□□□□ -0.67
TRIM16-201ENST00000336708 ZC3H3Q8IXZ2 948 aaKnown RBP10.85□□□□□ -0.67
TRIM16-201ENST00000336708 LENG9Q96B70 501 aa10.85□□□□□ -0.67
TRIM16-201ENST00000336708 PSMD1Q99460 953 aa10.85□□□□□ -0.67
TRIM16-201ENST00000336708 CHP1Q99653 195 aa10.85□□□□□ -0.67
TRIM16-201ENST00000336708 IRX2Q9BZI1 471 aaPredicted RBP10.85□□□□□ -0.67
TRIM16-201ENST00000336708 PLEKHA4Q9H4M7 779 aa10.85□□□□□ -0.67
TRIM16-201ENST00000336708 RRP15Q9Y3B9 282 aaKnown RBP10.85□□□□□ -0.67
TRIM16-201ENST00000336708 EPN1Q9Y6I3 576 aaPredicted RBP10.85□□□□□ -0.67
TRIM16-201ENST00000336708 OPLAHO14841 1288 aa10.85□□□□□ -0.67
TRIM16-201ENST00000336708 KIF5CO60282 957 aa10.85□□□□□ -0.67
TRIM16-201ENST00000336708 GDF11O95390 407 aa10.85□□□□□ -0.67
TRIM16-201ENST00000336708 FOSP01100 380 aaPredicted RBP10.85□□□□□ -0.67
TRIM16-201ENST00000336708 CYP3A4P08684 503 aa10.85□□□□□ -0.67
TRIM16-201ENST00000336708 HNRNPH3P31942 346 aaKnown RBP10.85□□□□□ -0.67
TRIM16-201ENST00000336708 ZBED6P86452 979 aa10.85□□□□□ -0.67
TRIM16-201ENST00000336708 RBM26Q5T8P6 1007 aaKnown RBP10.85□□□□□ -0.67
TRIM16-201ENST00000336708 GOLGA6L1Q8N7Z2 621 aa10.85□□□□□ -0.67
TRIM16-201ENST00000336708 LZTFL1Q9NQ48 299 aa10.85□□□□□ -0.67
TRIM16-201ENST00000336708 SPDYE2BA6NHP3 402 aa10.85□□□□□ -0.67
TRIM16-201ENST00000336708 FGFR1OPO95684 399 aaKnown RBP10.85□□□□□ -0.67
TRIM16-201ENST00000336708 VIL1P09327 827 aaKnown RBP10.85□□□□□ -0.67
TRIM16-201ENST00000336708 SPDYE6P0CI01 402 aa10.85□□□□□ -0.67
TRIM16-201ENST00000336708 BMP3P12645 472 aa10.85□□□□□ -0.67
TRIM16-201ENST00000336708 PPP2R3AQ06190 1150 aa10.85□□□□□ -0.67
TRIM16-201ENST00000336708 TBC1D8BQ0IIM8 1120 aa10.85□□□□□ -0.67
TRIM16-201ENST00000336708 COASYQ13057 564 aa10.85□□□□□ -0.67
TRIM16-201ENST00000336708 RSBN1LQ6PCB5 846 aaPredicted RBP10.85□□□□□ -0.67
TRIM16-201ENST00000336708 DYMQ7RTS9 669 aa10.85□□□□□ -0.67
TRIM16-201ENST00000336708 FBXO11Q86XK2 927 aa10.85□□□□□ -0.67
TRIM16-201ENST00000336708 NOC4LQ9BVI4 516 aaKnown RBP10.85□□□□□ -0.67
TRIM16-201ENST00000336708 ARGLU1Q9NWB6 273 aaPredicted RBP10.85□□□□□ -0.67
TRIM16-201ENST00000336708 SIK3Q9Y2K2 1263 aa10.85□□□□□ -0.67
TRIM16-201ENST00000336708 STK24Q9Y6E0 443 aa10.85□□□□□ -0.67
TRIM16-201ENST00000336708 CNTNAP1P78357 1384 aa10.84□□□□□ -0.67
TRIM16-201ENST00000336708 A0A1W2PRG0 241 aa10.84□□□□□ -0.67
TRIM16-201ENST00000336708 NKRFO15226 690 aaKnown RBP eCLIP10.84□□□□□ -0.67
TRIM16-201ENST00000336708 CHRM1P11229 460 aaPredicted RBP10.84□□□□□ -0.67
TRIM16-201ENST00000336708 ARHGAP4P98171 946 aa10.84□□□□□ -0.67
TRIM16-201ENST00000336708 VWA3BQ502W6 1294 aa10.84□□□□□ -0.67
TRIM16-201ENST00000336708 VPS33BQ9H267 617 aa10.84□□□□□ -0.67
TRIM16-201ENST00000336708 CWC15Q9P013 229 aaKnown RBP10.84□□□□□ -0.67
TRIM16-201ENST00000336708 JRKLQ9Y4A0 524 aa10.84□□□□□ -0.67
TRIM16-201ENST00000336708 PITPNM2Q9BZ72 1349 aa10.84□□□□□ -0.67
TRIM16-201ENST00000336708 PPIP5K2O43314 1243 aa10.84□□□□□ -0.67
TRIM16-201ENST00000336708 GH2P01242 217 aa10.84□□□□□ -0.67
TRIM16-201ENST00000336708 MTIF2P46199 727 aaKnown RBP10.84□□□□□ -0.67
TRIM16-201ENST00000336708 SLC12A3P55017 1021 aa10.84□□□□□ -0.67
TRIM16-201ENST00000336708 MARSP56192 900 aaKnown RBP10.84□□□□□ -0.67
TRIM16-201ENST00000336708 MAN2A1Q16706 1144 aa10.84□□□□□ -0.67
TRIM16-201ENST00000336708 CCDC170Q8IYT3 715 aa10.84□□□□□ -0.67
TRIM16-201ENST00000336708 FAM151AQ8WW52 585 aa10.84□□□□□ -0.67
TRIM16-201ENST00000336708 GJA10Q969M2 543 aa10.84□□□□□ -0.67
TRIM16-201ENST00000336708 ZSWIM4Q9H7M6 989 aa10.84□□□□□ -0.67
TRIM16-201ENST00000336708 PLA2G6O60733 806 aa10.83□□□□□ -0.68
TRIM16-201ENST00000336708 ABL1P00519 1130 aa10.83□□□□□ -0.68
TRIM16-201ENST00000336708 HERVK_113P62684 666 aa10.83□□□□□ -0.68
TRIM16-201ENST00000336708 SMC1AQ14683 1233 aaKnown RBP10.83□□□□□ -0.68
TRIM16-201ENST00000336708 FKBP1CQ5VVH2 108 aa10.83□□□□□ -0.68
TRIM16-201ENST00000336708 ARHGAP27Q6ZUM4 889 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms