RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 RBAK-RBAKDNI3L0D1 243 aa14.03□□□□□ -0.16
LIMK1-201ENST00000336180 HMGB2P26583 209 aaKnown RBP14.03□□□□□ -0.16
LIMK1-201ENST00000336180 FXR2P51116 673 aaKnown RBP eCLIP14.03□□□□□ -0.16
LIMK1-201ENST00000336180 DMTNQ08495 405 aa14.03□□□□□ -0.16
LIMK1-201ENST00000336180 PLS1Q14651 629 aa14.03□□□□□ -0.16
LIMK1-201ENST00000336180 TUBGCP2Q9BSJ2 902 aa14.03□□□□□ -0.16
LIMK1-201ENST00000336180 CRACR2AQ9BSW2 395 aa14.03□□□□□ -0.16
LIMK1-201ENST00000336180 RAVER2Q9HCJ3 691 aaKnown RBP14.03□□□□□ -0.16
LIMK1-201ENST00000336180 MYO3BQ8WXR4 1341 aa14.03□□□□□ -0.16
LIMK1-201ENST00000336180 TTC26A0AVF1 554 aa14.03□□□□□ -0.16
LIMK1-201ENST00000336180 NFIBO00712 420 aa14.03□□□□□ -0.16
LIMK1-201ENST00000336180 FKBP1AP62942 108 aaKnown RBP14.03□□□□□ -0.16
LIMK1-201ENST00000336180 ERVK-24P63145 666 aa14.03□□□□□ -0.16
LIMK1-201ENST00000336180 SYCP1Q15431 976 aa14.03□□□□□ -0.16
LIMK1-201ENST00000336180 HERC4Q5GLZ8 1057 aaPredicted RBP14.03□□□□□ -0.16
LIMK1-201ENST00000336180 CATSPER3Q86XQ3 398 aa14.03□□□□□ -0.16
LIMK1-201ENST00000336180 KIF18AQ8NI77 898 aa14.03□□□□□ -0.16
LIMK1-201ENST00000336180 FAM207AQ9NSI2 230 aaPredicted RBP14.03□□□□□ -0.16
LIMK1-201ENST00000336180 ABCB11O95342 1321 aa14.03□□□□□ -0.16
LIMK1-201ENST00000336180 MSH4O15457 936 aa14.03□□□□□ -0.16
LIMK1-201ENST00000336180 MFAP3LO75121 409 aa14.03□□□□□ -0.16
LIMK1-201ENST00000336180 PLA2G4BP0C869 781 aa14.03□□□□□ -0.16
LIMK1-201ENST00000336180 ALAS1P13196 640 aa14.03□□□□□ -0.16
LIMK1-201ENST00000336180 CAP2P40123 477 aa14.03□□□□□ -0.16
LIMK1-201ENST00000336180 TPH2Q8IWU9 490 aa14.03□□□□□ -0.16
LIMK1-201ENST00000336180 SMCR8Q8TEV9 937 aaPredicted RBP14.03□□□□□ -0.16
LIMK1-201ENST00000336180 C7orf25Q9BPX7 421 aa14.03□□□□□ -0.16
LIMK1-201ENST00000336180 RAB34Q9BZG1 259 aa14.03□□□□□ -0.16
LIMK1-201ENST00000336180 SPDYE4A6NLX3 237 aa14.02□□□□□ -0.16
LIMK1-201ENST00000336180 DYNC1I1O14576 645 aa14.02□□□□□ -0.16
LIMK1-201ENST00000336180 CASP5P51878 434 aa14.02□□□□□ -0.16
LIMK1-201ENST00000336180 GMCL1Q96IK5 515 aa14.02□□□□□ -0.16
LIMK1-201ENST00000336180 PYM1Q9BRP8 204 aaKnown RBP14.02□□□□□ -0.16
LIMK1-201ENST00000336180 WDR18Q9BV38 432 aa14.02□□□□□ -0.16
LIMK1-201ENST00000336180 PANK4Q9NVE7 773 aa14.02□□□□□ -0.16
LIMK1-201ENST00000336180 TMX2Q9Y320 296 aa14.02□□□□□ -0.16
LIMK1-201ENST00000336180 EPHB6O15197 1021 aa14.02□□□□□ -0.17
LIMK1-201ENST00000336180 TBC1D8BQ0IIM8 1120 aa14.02□□□□□ -0.17
LIMK1-201ENST00000336180 COASYQ13057 564 aa14.02□□□□□ -0.17
LIMK1-201ENST00000336180 ELF2Q15723 593 aa14.02□□□□□ -0.17
LIMK1-201ENST00000336180 PPP4R3AQ6IN85 833 aa14.02□□□□□ -0.17
LIMK1-201ENST00000336180 GMCL1P1Q8NEA9 526 aa14.02□□□□□ -0.17
LIMK1-201ENST00000336180 ANKRD20A12PQ8NF67 263 aa14.02□□□□□ -0.17
LIMK1-201ENST00000336180 CCDC47Q96A33 483 aaKnown RBP14.02□□□□□ -0.17
LIMK1-201ENST00000336180 NOC4LQ9BVI4 516 aaKnown RBP14.02□□□□□ -0.17
LIMK1-201ENST00000336180 CNOT7Q9UIV1 285 aaKnown RBP14.02□□□□□ -0.17
LIMK1-201ENST00000336180 HACL1Q9UJ83 578 aa14.02□□□□□ -0.17
LIMK1-201ENST00000336180 MORC2Q9Y6X9 1032 aaPredicted RBP14.02□□□□□ -0.17
LIMK1-201ENST00000336180 QSER1Q2KHR3 1735 aa14.02□□□□□ -0.17
LIMK1-201ENST00000336180 ARP10275 920 aa14.02□□□□□ -0.17
LIMK1-201ENST00000336180 PBX1P40424 430 aa14.02□□□□□ -0.17
LIMK1-201ENST00000336180 NT5C2P49902 561 aa14.02□□□□□ -0.17
LIMK1-201ENST00000336180 MTMR2Q13614 643 aa14.02□□□□□ -0.17
LIMK1-201ENST00000336180 LDHDQ86WU2 507 aa14.02□□□□□ -0.17
LIMK1-201ENST00000336180 IL31RAQ8NI17 732 aa14.02□□□□□ -0.17
LIMK1-201ENST00000336180 LENG9Q96B70 501 aa14.02□□□□□ -0.17
LIMK1-201ENST00000336180 LIMA1Q9UHB6 759 aaKnown RBP14.02□□□□□ -0.17
LIMK1-201ENST00000336180 HERC5Q9UII4 1024 aaKnown RBP14.02□□□□□ -0.17
LIMK1-201ENST00000336180 ATRNL1Q5VV63 1379 aa14.02□□□□□ -0.17
LIMK1-201ENST00000336180 TMEM150BA6NC51 233 aa14.01□□□□□ -0.17
LIMK1-201ENST00000336180 H7C1D1 291 aa14.01□□□□□ -0.17
LIMK1-201ENST00000336180 hCG_1984214I3L0E3 225 aa14.01□□□□□ -0.17
LIMK1-201ENST00000336180 ARHGAP6O43182 974 aa14.01□□□□□ -0.17
LIMK1-201ENST00000336180 CCNE1P24864 410 aa14.01□□□□□ -0.17
LIMK1-201ENST00000336180 AMPD3Q01432 767 aa14.01□□□□□ -0.17
LIMK1-201ENST00000336180 NCBP1Q09161 790 aaKnown RBP14.01□□□□□ -0.17
LIMK1-201ENST00000336180 ZNF713Q8N859 430 aaPredicted RBP14.01□□□□□ -0.17
LIMK1-201ENST00000336180 HOOK2Q96ED9 719 aa14.01□□□□□ -0.17
LIMK1-201ENST00000336180 BHMT2Q9H2M3 363 aa14.01□□□□□ -0.17
LIMK1-201ENST00000336180 VCPKMTQ9H867 229 aa14.01□□□□□ -0.17
LIMK1-201ENST00000336180 GOPCQ9HD26 462 aa14.01□□□□□ -0.17
LIMK1-201ENST00000336180 ZNF541Q9H0D2 1346 aa14.01□□□□□ -0.17
LIMK1-201ENST00000336180 SP4Q02446 784 aa14.01□□□□□ -0.17
LIMK1-201ENST00000336180 KCNA1Q09470 495 aa14.01□□□□□ -0.17
LIMK1-201ENST00000336180 SPP2Q13103 211 aa14.01□□□□□ -0.17
LIMK1-201ENST00000336180 KCNB1Q14721 858 aa14.01□□□□□ -0.17
LIMK1-201ENST00000336180 TRIM65Q6PJ69 517 aa14.01□□□□□ -0.17
LIMK1-201ENST00000336180 MB21D1Q8N884 522 aa14.01□□□□□ -0.17
LIMK1-201ENST00000336180 NOC3LQ8WTT2 800 aaKnown RBP14.01□□□□□ -0.17
LIMK1-201ENST00000336180 CCPG1Q9ULG6 757 aa14.01□□□□□ -0.17
LIMK1-201ENST00000336180 TRAF5O00463 557 aa14□□□□□ -0.17
LIMK1-201ENST00000336180 PLEKP08567 350 aaPredicted RBP14□□□□□ -0.17
LIMK1-201ENST00000336180 TRIM21P19474 475 aaKnown RBP14□□□□□ -0.17
LIMK1-201ENST00000336180 DEFB129Q9H1M3 183 aa14□□□□□ -0.17
LIMK1-201ENST00000336180 MMRN2Q9H8L6 949 aa14□□□□□ -0.17
LIMK1-201ENST00000336180 COL20A1Q9P218 1284 aa14□□□□□ -0.17
LIMK1-201ENST00000336180 FLOT1O75955 427 aa14□□□□□ -0.17
LIMK1-201ENST00000336180 ERCC6LQ2NKX8 1250 aa14□□□□□ -0.17
LIMK1-201ENST00000336180 ARSHQ5FYA8 562 aa14□□□□□ -0.17
LIMK1-201ENST00000336180 PPP1R18Q6NYC8 613 aa14□□□□□ -0.17
LIMK1-201ENST00000336180 ETNPPLQ8TBG4 499 aa14□□□□□ -0.17
LIMK1-201ENST00000336180 DNAJC19Q96DA6 116 aa14□□□□□ -0.17
LIMK1-201ENST00000336180 CTAGE1Q96RT6 745 aa14□□□□□ -0.17
LIMK1-201ENST00000336180 KCNMB3Q9NPA1 279 aa14□□□□□ -0.17
LIMK1-201ENST00000336180 PRPF6O94906 941 aaKnown RBP14□□□□□ -0.17
LIMK1-201ENST00000336180 CYP27A1Q02318 531 aa14□□□□□ -0.17
LIMK1-201ENST00000336180 TMEM119Q4V9L6 283 aa14□□□□□ -0.17
LIMK1-201ENST00000336180 MUM1L1Q5H9M0 696 aa14□□□□□ -0.17
LIMK1-201ENST00000336180 UTP14CQ5TAP6 766 aaKnown RBP14□□□□□ -0.17
LIMK1-201ENST00000336180 ANGEL2Q5VTE6 544 aaKnown RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms