RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 SPAG1Q07617 926 aa15.38■□□□□ 0.05
SF1-202ENST00000334944 GRB10Q13322 594 aa15.38■□□□□ 0.05
SF1-202ENST00000334944 APOBEC3HQ6NTF7 200 aaKnown RBP15.38■□□□□ 0.05
SF1-202ENST00000334944 KIAA0895Q8NCT3 520 aa15.38■□□□□ 0.05
SF1-202ENST00000334944 TUBGCP2Q9BSJ2 902 aa15.38■□□□□ 0.05
SF1-202ENST00000334944 ADAMTSL1Q8N6G6 1762 aa15.38■□□□□ 0.05
SF1-202ENST00000334944 PRPHP41219 470 aa15.38■□□□□ 0.05
SF1-202ENST00000334944 SETQ01105 290 aaPredicted RBP15.38■□□□□ 0.05
SF1-202ENST00000334944 FAM76AQ8TAV0 307 aa15.38■□□□□ 0.05
SF1-202ENST00000334944 CDK5RAP3Q96JB5 506 aa15.38■□□□□ 0.05
SF1-202ENST00000334944 GOLGA6CA6NDK9 693 aa15.37■□□□□ 0.05
SF1-202ENST00000334944 POTEB2H3BUK9 544 aa15.37■□□□□ 0.05
SF1-202ENST00000334944 GOLGA6DP0CG33 693 aa15.37■□□□□ 0.05
SF1-202ENST00000334944 MTIF2P46199 727 aaKnown RBP15.37■□□□□ 0.05
SF1-202ENST00000334944 ZNF543Q08ER8 600 aa15.37■□□□□ 0.05
SF1-202ENST00000334944 ECM1Q16610 540 aa15.37■□□□□ 0.05
SF1-202ENST00000334944 CEP57Q86XR8 500 aa15.37■□□□□ 0.05
SF1-202ENST00000334944 SNX29Q8TEQ0 813 aa15.37■□□□□ 0.05
SF1-202ENST00000334944 CALML4Q96GE6 196 aa15.37■□□□□ 0.05
SF1-202ENST00000334944 PNMA5Q96PV4 448 aa15.37■□□□□ 0.05
SF1-202ENST00000334944 DNAJC18Q9H819 358 aa15.37■□□□□ 0.05
SF1-202ENST00000334944 BLOC1S4Q9NUP1 217 aa15.37■□□□□ 0.05
SF1-202ENST00000334944 GOLGA6AQ9NYA3 693 aa15.37■□□□□ 0.05
SF1-202ENST00000334944 DDTLA6NHG4 134 aaPredicted RBP15.37■□□□□ 0.05
SF1-202ENST00000334944 GDF11O95390 407 aa15.37■□□□□ 0.05
SF1-202ENST00000334944 TRIM21P19474 475 aaKnown RBP15.37■□□□□ 0.05
SF1-202ENST00000334944 ELF1P32519 619 aa15.37■□□□□ 0.05
SF1-202ENST00000334944 USP8P40818 1118 aa15.37■□□□□ 0.05
SF1-202ENST00000334944 MAP9Q49MG5 647 aa15.37■□□□□ 0.05
SF1-202ENST00000334944 PRPF38AQ8NAV1 312 aaKnown RBP15.37■□□□□ 0.05
SF1-202ENST00000334944 P2RX5Q93086 422 aa15.37■□□□□ 0.05
SF1-202ENST00000334944 ZKSCAN4Q969J2 545 aaPredicted RBP15.37■□□□□ 0.05
SF1-202ENST00000334944 CABS1Q96KC9 395 aa15.37■□□□□ 0.05
SF1-202ENST00000334944 CNOT6LQ96LI5 555 aaKnown RBP15.37■□□□□ 0.05
SF1-202ENST00000334944 LGALS16A8MUM7 142 aa15.37■□□□□ 0.05
SF1-202ENST00000334944 LAD1O00515 517 aa15.37■□□□□ 0.05
SF1-202ENST00000334944 RDXP35241 583 aaKnown RBP15.37■□□□□ 0.05
SF1-202ENST00000334944 TBC1D8BQ0IIM8 1120 aa15.37■□□□□ 0.05
SF1-202ENST00000334944 KCNB1Q14721 858 aa15.37■□□□□ 0.05
SF1-202ENST00000334944 SLC27A3Q5K4L6 730 aa15.37■□□□□ 0.05
SF1-202ENST00000334944 TEKT1Q969V4 418 aa15.37■□□□□ 0.05
SF1-202ENST00000334944 MIEF2Q96C03 454 aa15.37■□□□□ 0.05
SF1-202ENST00000334944 CRACR2AQ9BSW2 395 aa15.37■□□□□ 0.05
SF1-202ENST00000334944 LUC7L2Q9Y383 392 aaKnown RBP15.37■□□□□ 0.05
SF1-202ENST00000334944 REXO2Q9Y3B8 237 aaKnown RBP15.37■□□□□ 0.05
SF1-202ENST00000334944 SAMD1Q6SPF0 538 aaPredicted RBP15.36■□□□□ 0.05
SF1-202ENST00000334944 SEMA6BQ9H3T3 888 aa15.36■□□□□ 0.05
SF1-202ENST00000334944 KANSL2Q9H9L4 492 aa15.36■□□□□ 0.05
SF1-202ENST00000334944 CRKP46108 304 aa15.36■□□□□ 0.05
SF1-202ENST00000334944 ATP1A2P50993 1020 aa15.36■□□□□ 0.05
SF1-202ENST00000334944 PDCLQ13371 301 aa15.36■□□□□ 0.05
SF1-202ENST00000334944 CYP26C1Q6V0L0 522 aa15.36■□□□□ 0.05
SF1-202ENST00000334944 MTMR9Q96QG7 549 aa15.36■□□□□ 0.05
SF1-202ENST00000334944 NAA15Q9BXJ9 866 aaKnown RBP15.36■□□□□ 0.05
SF1-202ENST00000334944 GBP3Q9H0R5 595 aa15.36■□□□□ 0.05
SF1-202ENST00000334944 ITIH6Q6UXX5 1313 aa15.36■□□□□ 0.05
SF1-202ENST00000334944 SHTN1A0MZ66 631 aa15.35■□□□□ 0.05
SF1-202ENST00000334944 AGPSO00116 658 aa15.35■□□□□ 0.05
SF1-202ENST00000334944 ZEB2O60315 1214 aa15.35■□□□□ 0.05
SF1-202ENST00000334944 CYP27A1Q02318 531 aa15.35■□□□□ 0.05
SF1-202ENST00000334944 ASPRV1Q53RT3 343 aa15.35■□□□□ 0.05
SF1-202ENST00000334944 RNF187Q5TA31 235 aaPredicted RBP15.35■□□□□ 0.05
SF1-202ENST00000334944 SV2BQ7L1I2 683 aa15.35■□□□□ 0.05
SF1-202ENST00000334944 TMTC1Q8IUR5 882 aa15.35■□□□□ 0.05
SF1-202ENST00000334944 CCDC155Q8N6L0 562 aa15.35■□□□□ 0.05
SF1-202ENST00000334944 AK8Q96MA6 479 aa15.35■□□□□ 0.05
SF1-202ENST00000334944 NOC4LQ9BVI4 516 aaKnown RBP15.35■□□□□ 0.05
SF1-202ENST00000334944 FAM107BQ9H098 131 aa15.35■□□□□ 0.05
SF1-202ENST00000334944 CHRNA5P30532 468 aa15.35■□□□□ 0.05
SF1-202ENST00000334944 ARHGAP25P42331 645 aa15.35■□□□□ 0.05
SF1-202ENST00000334944 OTUD6BQ8N6M0 293 aa15.35■□□□□ 0.05
SF1-202ENST00000334944 ZNF507Q8TCN5 953 aa15.35■□□□□ 0.05
SF1-202ENST00000334944 CAPS2Q9BXY5 557 aa15.35■□□□□ 0.05
SF1-202ENST00000334944 EPN1Q9Y6I3 576 aaPredicted RBP15.35■□□□□ 0.05
SF1-202ENST00000334944 NPHP3-ACAD11A0A0J9YXS1 232 aa15.35■□□□□ 0.05
SF1-202ENST00000334944 RASSF10A6NK89 507 aa15.35■□□□□ 0.05
SF1-202ENST00000334944 APBA3O96018 575 aa15.35■□□□□ 0.05
SF1-202ENST00000334944 EEF2P13639 858 aaKnown RBP15.35■□□□□ 0.05
SF1-202ENST00000334944 STAT3P40763 770 aa15.35■□□□□ 0.05
SF1-202ENST00000334944 USH1GQ495M9 461 aa15.35■□□□□ 0.05
SF1-202ENST00000334944 WDR59Q6PJI9 974 aa15.35■□□□□ 0.05
SF1-202ENST00000334944 FAXDC2Q96IV6 333 aa15.35■□□□□ 0.05
SF1-202ENST00000334944 PSTPIP2Q9H939 334 aa15.35■□□□□ 0.05
SF1-202ENST00000334944 FAM207AQ9NSI2 230 aaPredicted RBP15.35■□□□□ 0.05
SF1-202ENST00000334944 DDX25Q9UHL0 483 aaKnown RBP15.35■□□□□ 0.05
SF1-202ENST00000334944 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.35■□□□□ 0.05
SF1-202ENST00000334944 IGKV6D-41A0A0C4DH26 115 aa15.34■□□□□ 0.05
SF1-202ENST00000334944 PNMA6FA0A0J9YX94 578 aa15.34■□□□□ 0.05
SF1-202ENST00000334944 KLRG2A4D1S0 409 aaPredicted RBP15.34■□□□□ 0.05
SF1-202ENST00000334944 NDUFAB1O14561 156 aa15.34■□□□□ 0.05
SF1-202ENST00000334944 IRF6O14896 467 aa15.34■□□□□ 0.05
SF1-202ENST00000334944 NDUFA10O95299 355 aa15.34■□□□□ 0.05
SF1-202ENST00000334944 PLEKP08567 350 aaPredicted RBP15.34■□□□□ 0.05
SF1-202ENST00000334944 CCNE1P24864 410 aa15.34■□□□□ 0.05
SF1-202ENST00000334944 NF2P35240 595 aa15.34■□□□□ 0.05
SF1-202ENST00000334944 IKQ13123 557 aaPredicted RBP15.34■□□□□ 0.05
SF1-202ENST00000334944 SEPT2Q15019 361 aa15.34■□□□□ 0.05
SF1-202ENST00000334944 E2F5Q15329 346 aa15.34■□□□□ 0.05
SF1-202ENST00000334944 SLC30A10Q6XR72 485 aa15.34■□□□□ 0.05
SF1-202ENST00000334944 SPICE1Q8N0Z3 855 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms