RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 SELENOSQ9BQE4 189 aa16.45■□□□□ 0.22
C9orf47-201ENST00000334490 STAT3P40763 770 aa16.44■□□□□ 0.22
C9orf47-201ENST00000334490 COL23A1Q86Y22 540 aaPredicted RBP16.44■□□□□ 0.22
C9orf47-201ENST00000334490 NLRP4Q96MN2 994 aa16.44■□□□□ 0.22
C9orf47-201ENST00000334490 TFAMQ00059 246 aaKnown RBP16.44■□□□□ 0.22
C9orf47-201ENST00000334490 UAP1Q16222 522 aaPredicted RBP16.44■□□□□ 0.22
C9orf47-201ENST00000334490 KLHL7Q8IXQ5 586 aa16.44■□□□□ 0.22
C9orf47-201ENST00000334490 DISC1Q9NRI5 854 aa16.44■□□□□ 0.22
C9orf47-201ENST00000334490 LRFN2Q9ULH4 789 aa16.44■□□□□ 0.22
C9orf47-201ENST00000334490 A0A087WWV3 80 aa16.44■□□□□ 0.22
C9orf47-201ENST00000334490 PSMD14O00487 310 aa16.44■□□□□ 0.22
C9orf47-201ENST00000334490 GYS1P13807 737 aa16.44■□□□□ 0.22
C9orf47-201ENST00000334490 CDC27P30260 824 aa16.44■□□□□ 0.22
C9orf47-201ENST00000334490 ARHGAP4P98171 946 aa16.44■□□□□ 0.22
C9orf47-201ENST00000334490 ADGRF4Q8IZF3 695 aa16.44■□□□□ 0.22
C9orf47-201ENST00000334490 AMFRQ9UKV5 643 aa16.44■□□□□ 0.22
C9orf47-201ENST00000334490 ABCB11O95342 1321 aa16.44■□□□□ 0.22
C9orf47-201ENST00000334490 RFX1P22670 979 aa16.44■□□□□ 0.22
C9orf47-201ENST00000334490 GTF2F1P35269 517 aaKnown RBP eCLIP16.44■□□□□ 0.22
C9orf47-201ENST00000334490 OSTNP61366 133 aa16.44■□□□□ 0.22
C9orf47-201ENST00000334490 PTK2Q05397 1052 aa16.44■□□□□ 0.22
C9orf47-201ENST00000334490 TUBB2AQ13885 445 aa16.44■□□□□ 0.22
C9orf47-201ENST00000334490 ZNF658Q5TYW1 1059 aaPredicted RBP16.44■□□□□ 0.22
C9orf47-201ENST00000334490 ANKRD36BP1Q96IX9 119 aa16.44■□□□□ 0.22
C9orf47-201ENST00000334490 TUBB2BQ9BVA1 445 aa16.44■□□□□ 0.22
C9orf47-201ENST00000334490 FLT1P17948 1338 aa16.43■□□□□ 0.22
C9orf47-201ENST00000334490 POLR2BP30876 1174 aaKnown RBP16.43■□□□□ 0.22
C9orf47-201ENST00000334490 RNASELQ05823 741 aaKnown RBP16.43■□□□□ 0.22
C9orf47-201ENST00000334490 PIGOQ8TEQ8 1089 aa16.43■□□□□ 0.22
C9orf47-201ENST00000334490 ATRIPQ8WXE1 791 aa16.43■□□□□ 0.22
C9orf47-201ENST00000334490 DESI2Q9BSY9 194 aa16.43■□□□□ 0.22
C9orf47-201ENST00000334490 CARD6Q9BX69 1037 aa16.43■□□□□ 0.22
C9orf47-201ENST00000334490 STK36Q9NRP7 1315 aa16.43■□□□□ 0.22
C9orf47-201ENST00000334490 K7ERI5 159 aa16.43■□□□□ 0.22
C9orf47-201ENST00000334490 H2AFZP0C0S5 128 aa16.43■□□□□ 0.22
C9orf47-201ENST00000334490 NFX1Q12986 1120 aaKnown RBP16.43■□□□□ 0.22
C9orf47-201ENST00000334490 ANGEL2Q5VTE6 544 aaKnown RBP16.43■□□□□ 0.22
C9orf47-201ENST00000334490 CDC42EP5Q6NZY7 148 aa16.43■□□□□ 0.22
C9orf47-201ENST00000334490 HHIPL2Q6UWX4 724 aa16.43■□□□□ 0.22
C9orf47-201ENST00000334490 H2AFVQ71UI9 128 aa16.43■□□□□ 0.22
C9orf47-201ENST00000334490 FBXO33Q7Z6M2 555 aa16.43■□□□□ 0.22
C9orf47-201ENST00000334490 CCDC105Q8IYK2 499 aa16.43■□□□□ 0.22
C9orf47-201ENST00000334490 UTP11Q9Y3A2 253 aaKnown RBP16.43■□□□□ 0.22
C9orf47-201ENST00000334490 ZBTB33Q86T24 672 aa16.43■□□□□ 0.22
C9orf47-201ENST00000334490 ELP3Q9H9T3 547 aa16.43■□□□□ 0.22
C9orf47-201ENST00000334490 GMPSP49915 693 aaPredicted RBP16.43■□□□□ 0.22
C9orf47-201ENST00000334490 MIS12Q9H081 205 aa16.43■□□□□ 0.22
C9orf47-201ENST00000334490 KCNK9Q9NPC2 374 aa16.43■□□□□ 0.22
C9orf47-201ENST00000334490 ZNF70Q9UC06 446 aaPredicted RBP16.43■□□□□ 0.22
C9orf47-201ENST00000334490 POTEMA6NI47 508 aa16.42■□□□□ 0.22
C9orf47-201ENST00000334490 JAK3P52333 1124 aa16.42■□□□□ 0.22
C9orf47-201ENST00000334490 PPP2R5DQ14738 602 aa16.42■□□□□ 0.22
C9orf47-201ENST00000334490 KRT222Q8N1A0 295 aa16.42■□□□□ 0.22
C9orf47-201ENST00000334490 RPAP3Q9H6T3 665 aaPredicted RBP16.42■□□□□ 0.22
C9orf47-201ENST00000334490 GGA3Q9NZ52 723 aa16.42■□□□□ 0.22
C9orf47-201ENST00000334490 TSKSQ9UJT2 592 aa16.42■□□□□ 0.22
C9orf47-201ENST00000334490 FDX1P10109 184 aa16.42■□□□□ 0.22
C9orf47-201ENST00000334490 FASTKD5Q7L8L6 764 aaKnown RBP16.42■□□□□ 0.22
C9orf47-201ENST00000334490 OXER1Q8TDS5 423 aa16.42■□□□□ 0.22
C9orf47-201ENST00000334490 ACAD9Q9H845 621 aa16.42■□□□□ 0.22
C9orf47-201ENST00000334490 HACL1Q9UJ83 578 aa16.42■□□□□ 0.22
C9orf47-201ENST00000334490 MAN1B1Q9UKM7 699 aa16.42■□□□□ 0.22
C9orf47-201ENST00000334490 ENTPD3O75355 529 aa16.42■□□□□ 0.22
C9orf47-201ENST00000334490 EEF1GP26641 437 aaKnown RBP16.42■□□□□ 0.22
C9orf47-201ENST00000334490 NSFP46459 744 aaKnown RBP16.42■□□□□ 0.22
C9orf47-201ENST00000334490 MFAP3P55082 362 aa16.42■□□□□ 0.22
C9orf47-201ENST00000334490 CFAP221Q4G0U5 840 aa16.42■□□□□ 0.22
C9orf47-201ENST00000334490 TMEM260Q9NX78 707 aa16.42■□□□□ 0.22
C9orf47-201ENST00000334490 CHGBP05060 677 aa16.42■□□□□ 0.22
C9orf47-201ENST00000334490 BPIFB4P59827 614 aa16.42■□□□□ 0.22
C9orf47-201ENST00000334490 SGMS1Q86VZ5 419 aa16.42■□□□□ 0.22
C9orf47-201ENST00000334490 TBC1D22BQ9NU19 505 aa16.42■□□□□ 0.22
C9orf47-201ENST00000334490 WDR64B1ANS9 1081 aa16.41■□□□□ 0.22
C9orf47-201ENST00000334490 MYL3P08590 195 aa16.41■□□□□ 0.22
C9orf47-201ENST00000334490 MTMR2Q13614 643 aa16.41■□□□□ 0.22
C9orf47-201ENST00000334490 PRAMEF18Q5VWM3 479 aa16.41■□□□□ 0.22
C9orf47-201ENST00000334490 STAG2Q8N3U4 1231 aa16.41■□□□□ 0.22
C9orf47-201ENST00000334490 MRRFQ96E11 262 aaKnown RBP16.41■□□□□ 0.22
C9orf47-201ENST00000334490 MRFAP1L1Q96HT8 127 aa16.41■□□□□ 0.22
C9orf47-201ENST00000334490 PCDHB4Q9Y5E5 795 aa16.41■□□□□ 0.22
C9orf47-201ENST00000334490 ADGRB1O14514 1584 aa16.41■□□□□ 0.22
C9orf47-201ENST00000334490 SFI1A8K8P3 1242 aa16.41■□□□□ 0.22
C9orf47-201ENST00000334490 IGSF3O75054 1194 aa16.41■□□□□ 0.22
C9orf47-201ENST00000334490 AFPP02771 609 aaKnown RBP16.41■□□□□ 0.22
C9orf47-201ENST00000334490 PEX3P56589 373 aa16.41■□□□□ 0.22
C9orf47-201ENST00000334490 PPP1R18Q6NYC8 613 aa16.41■□□□□ 0.22
C9orf47-201ENST00000334490 BARHL2Q9NY43 387 aa16.41■□□□□ 0.22
C9orf47-201ENST00000334490 FCER1AP12319 257 aa16.41■□□□□ 0.22
C9orf47-201ENST00000334490 ABCD1P33897 745 aa16.41■□□□□ 0.22
C9orf47-201ENST00000334490 IRX5P78411 483 aaPredicted RBP16.41■□□□□ 0.22
C9orf47-201ENST00000334490 DNAJC21Q5F1R6 531 aaKnown RBP16.41■□□□□ 0.22
C9orf47-201ENST00000334490 TDRD7Q8NHU6 1098 aaKnown RBP16.41■□□□□ 0.22
C9orf47-201ENST00000334490 CACTINQ8WUQ7 758 aaKnown RBP16.41■□□□□ 0.22
C9orf47-201ENST00000334490 PAGE5Q96GU1 130 aa16.41■□□□□ 0.22
C9orf47-201ENST00000334490 ZNF512BQ96KM6 892 aaPredicted RBP16.41■□□□□ 0.22
C9orf47-201ENST00000334490 FAM184BQ9ULE4 1060 aa16.41■□□□□ 0.22
C9orf47-201ENST00000334490 STAM2O75886 525 aa16.4■□□□□ 0.22
C9orf47-201ENST00000334490 CCNE1P24864 410 aa16.4■□□□□ 0.22
C9orf47-201ENST00000334490 RFX5P48382 616 aaPredicted RBP16.4■□□□□ 0.22
C9orf47-201ENST00000334490 PTPROQ16827 1216 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms