RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 KLHL11Q9NVR0 708 aa6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 RGS17Q9UGC6 210 aaPredicted RBP6.55□□□□□ -1.36
CDC42BPA-201ENST00000334218 AP3B1O00203 1094 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 EXTL3O43909 919 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 PPP4R1Q8TF05 950 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 CAPS2Q9BXY5 557 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 PSTPIP2Q9H939 334 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 KIF14Q15058 1648 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 ZMYND11Q15326 602 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 WAPLQ7Z5K2 1190 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 ATP6V1G3Q96LB4 118 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 IMPACTQ9P2X3 320 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 UBA2Q9UBT2 640 aaPredicted RBP6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 FAM135AQ9P2D6 1515 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 SEMA3EO15041 775 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 PDE5AO76074 875 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 SMCO1Q147U7 214 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 WDR44Q5JSH3 913 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 ZNF285Q96NJ3 590 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 CNPY3Q9BT09 278 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 RGS5O15539 181 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 PSMC3P17980 439 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 SPAM1P38567 509 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 GNG11P61952 73 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 COTL1Q14019 142 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 BICDL1Q6ZP65 573 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 APOL4Q9BPW4 351 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 PPANQ9NQ55 473 aaKnown RBP6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 C9orf84Q5VXU9 1444 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 GTPBP10A4D1E9 387 aaKnown RBP6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 DNAJC6O75061 913 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 GSNP06396 782 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 ABCB1P08183 1280 aaPredicted RBP6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 EXOC3L4Q17RC7 722 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 PLCZ1Q86YW0 608 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 SPICE1Q8N0Z3 855 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 ATL2Q8NHH9 583 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 GATAD2BQ8WXI9 593 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 INPP5DQ92835 1189 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 SETD4Q9NVD3 440 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 SH3GLB1Q9Y371 365 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 C2orf74A8MZ97 194 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 N4BP3O15049 544 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 ADCY6O43306 1168 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 RETREG2Q8NC44 543 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 FAM149B1Q96BN6 582 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 COPG2Q9UBF2 871 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 ASNA1O43681 348 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 ECDO95905 644 aaPredicted RBP6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 HPDP32754 393 aaPredicted RBP6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 GUCY2FP51841 1108 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 BFSP2Q13515 415 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 E2F5Q15329 346 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 OCLNQ16625 522 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 GNPTABQ3T906 1256 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 KRT26Q7Z3Y9 468 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 CCDC197Q8NCU1 140 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 C8orf4Q9NR00 106 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 GTF3C4Q9UKN8 822 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 FAM47DPA6NHR8 397 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 TYRO3Q06418 890 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 PAK2Q13177 524 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 KYNUQ16719 465 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 C1orf141Q5JVX7 400 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 TCEANC2Q96MN5 208 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 LRRC37BQ96QE4 947 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 EHD1Q9H4M9 534 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 SFMBT1Q9UHJ3 866 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 SAP30BPQ9UHR5 308 aaKnown RBP6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 TRAF3IP3Q9Y228 551 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 ABCC10Q5T3U5 1492 aa6.54□□□□□ -1.36
CDC42BPA-201ENST00000334218 TNFAIP2Q03169 654 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 PPP2R5CQ13362 524 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 OASLQ15646 514 aaKnown RBP6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 PPP1R13LQ8WUF5 828 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 RSPH1Q8WYR4 309 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 CYP4F11Q9HBI6 524 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 BIN1O00499 593 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 BTN3A2P78410 334 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 SSRP1Q08945 709 aaKnown RBP6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 PITRM1Q5JRX3 1037 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 PRPF40BQ6NWY9 871 aaKnown RBP6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 ENKURQ8TC29 256 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 MOV10Q9HCE1 1003 aaKnown RBP6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 CYTH4Q9UIA0 394 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 TMED5Q9Y3A6 229 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 TNRQ92752 1358 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 PAPOLAP51003 745 aaKnown RBP6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 C1orf228Q6PIY5 440 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 LNX2Q8N448 690 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 FBXO18Q8NFZ0 1043 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 CARD6Q9BX69 1037 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 PARVGQ9HBI0 331 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 STX18Q9P2W9 335 aaKnown RBP6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 BTN3A3O00478 584 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 GMFGO60234 142 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 CDC45O75419 566 aa6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 PURAQ00577 322 aaKnown RBP6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 FOXD4Q12950 439 aaPredicted RBP6.53□□□□□ -1.36
CDC42BPA-201ENST00000334218 SLC9C1Q4G0N8 1177 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms