RNA–Protein interactions for RNA: ENST00000332246.10

CSGALNACT1-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 3,872 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-201ENST00000332246 DMGDHQ9UI17 866 aaKnown RBP10.77□□□□□ -0.69
CSGALNACT1-201ENST00000332246 USP17L10C9JJH3 530 aa10.77□□□□□ -0.69
CSGALNACT1-201ENST00000332246 RNF225M0QZC1 329 aaPredicted RBP10.77□□□□□ -0.69
CSGALNACT1-201ENST00000332246 DLATP10515 647 aaKnown RBP10.77□□□□□ -0.69
CSGALNACT1-201ENST00000332246 TROAPQ12815 778 aa10.77□□□□□ -0.69
CSGALNACT1-201ENST00000332246 NFIXQ14938 502 aa10.77□□□□□ -0.69
CSGALNACT1-201ENST00000332246 SLFN13Q68D06 897 aa10.77□□□□□ -0.69
CSGALNACT1-201ENST00000332246 LIMA1Q9UHB6 759 aaKnown RBP10.77□□□□□ -0.69
CSGALNACT1-201ENST00000332246 GOLGA8IPA6NC78 632 aa10.76□□□□□ -0.69
CSGALNACT1-201ENST00000332246 ZSCAN5CA6NGD5 496 aaPredicted RBP10.76□□□□□ -0.69
CSGALNACT1-201ENST00000332246 GOLGA8JA6NMD2 632 aa10.76□□□□□ -0.69
CSGALNACT1-201ENST00000332246 TAL1P17542 331 aaPredicted RBP10.76□□□□□ -0.69
CSGALNACT1-201ENST00000332246 COPB2P35606 906 aa10.76□□□□□ -0.69
CSGALNACT1-201ENST00000332246 SEC24CP53992 1094 aa10.76□□□□□ -0.69
CSGALNACT1-201ENST00000332246 USP14P54578 494 aa10.76□□□□□ -0.69
CSGALNACT1-201ENST00000332246 DHX9Q08211 1270 aaKnown RBP10.76□□□□□ -0.69
CSGALNACT1-201ENST00000332246 FBXW10Q5XX13 1052 aa10.76□□□□□ -0.69
CSGALNACT1-201ENST00000332246 C3orf67Q6ZVT6 689 aa10.76□□□□□ -0.69
CSGALNACT1-201ENST00000332246 TCP11Q8WWU5 503 aa10.76□□□□□ -0.69
CSGALNACT1-201ENST00000332246 JPH2Q9BR39 696 aaPredicted RBP10.76□□□□□ -0.69
CSGALNACT1-201ENST00000332246 AMFRQ9UKV5 643 aa10.76□□□□□ -0.69
CSGALNACT1-201ENST00000332246 STXBP4Q6ZWJ1 553 aa10.76□□□□□ -0.69
CSGALNACT1-201ENST00000332246 B4GALNT4Q76KP1 1039 aa10.76□□□□□ -0.69
CSGALNACT1-201ENST00000332246 SPATA4Q8NEY3 305 aa10.76□□□□□ -0.69
CSGALNACT1-201ENST00000332246 HDAC7Q8WUI4 952 aa10.76□□□□□ -0.69
CSGALNACT1-201ENST00000332246 NSUN4Q96CB9 384 aaKnown RBP10.76□□□□□ -0.69
CSGALNACT1-201ENST00000332246 OSBPL9Q96SU4 736 aa10.76□□□□□ -0.69
CSGALNACT1-201ENST00000332246 AGXT2Q9BYV1 514 aa10.76□□□□□ -0.69
CSGALNACT1-201ENST00000332246 COL4A3BPQ9Y5P4 624 aa10.76□□□□□ -0.69
CSGALNACT1-201ENST00000332246 MEGF6O75095 1541 aa10.76□□□□□ -0.69
CSGALNACT1-201ENST00000332246 SSTR3P32745 418 aaPredicted RBP10.76□□□□□ -0.69
CSGALNACT1-201ENST00000332246 TRAPPC10P48553 1259 aa10.76□□□□□ -0.69
CSGALNACT1-201ENST00000332246 ACTN3Q08043 901 aaPredicted RBP10.76□□□□□ -0.69
CSGALNACT1-201ENST00000332246 HAUS3Q68CZ6 603 aa10.76□□□□□ -0.69
CSGALNACT1-201ENST00000332246 ALKBH5Q6P6C2 394 aaKnown RBP10.76□□□□□ -0.69
CSGALNACT1-201ENST00000332246 HOOK3Q86VS8 718 aa10.76□□□□□ -0.69
CSGALNACT1-201ENST00000332246 SAMD15Q9P1V8 674 aa10.76□□□□□ -0.69
CSGALNACT1-201ENST00000332246 FAM169AQ9Y6X4 670 aa10.76□□□□□ -0.69
CSGALNACT1-201ENST00000332246 FAM205AQ6ZU69 1335 aa10.76□□□□□ -0.69
CSGALNACT1-201ENST00000332246 KDM6AO15550 1401 aaPredicted RBP10.75□□□□□ -0.69
CSGALNACT1-201ENST00000332246 PLA2G4BP0C869 781 aa10.75□□□□□ -0.69
CSGALNACT1-201ENST00000332246 CETN2P41208 172 aa10.75□□□□□ -0.69
CSGALNACT1-201ENST00000332246 TRIM28Q13263 835 aaKnown RBP10.75□□□□□ -0.69
CSGALNACT1-201ENST00000332246 ITPK1Q13572 414 aa10.75□□□□□ -0.69
CSGALNACT1-201ENST00000332246 ALX1Q15699 326 aa10.75□□□□□ -0.69
CSGALNACT1-201ENST00000332246 HP1BP3Q5SSJ5 553 aaPredicted RBP10.75□□□□□ -0.69
CSGALNACT1-201ENST00000332246 ODR4Q5SWX8 454 aa10.75□□□□□ -0.69
CSGALNACT1-201ENST00000332246 FAM178BQ8IXR5 827 aa10.75□□□□□ -0.69
CSGALNACT1-201ENST00000332246 TRIM9Q9C026 710 aa10.75□□□□□ -0.69
CSGALNACT1-201ENST00000332246 STK36Q9NRP7 1315 aa10.75□□□□□ -0.69
CSGALNACT1-201ENST00000332246 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.75□□□□□ -0.69
CSGALNACT1-201ENST00000332246 ERVV-1B6SEH8 477 aa10.75□□□□□ -0.69
CSGALNACT1-201ENST00000332246 ATP8B1O43520 1251 aa10.75□□□□□ -0.69
CSGALNACT1-201ENST00000332246 GAS7O60861 476 aa10.75□□□□□ -0.69
CSGALNACT1-201ENST00000332246 FAM83BQ5T0W9 1011 aa10.75□□□□□ -0.69
CSGALNACT1-201ENST00000332246 LRRC45Q96CN5 670 aa10.75□□□□□ -0.69
CSGALNACT1-201ENST00000332246 BSDC1Q9NW68 430 aaPredicted RBP10.75□□□□□ -0.69
CSGALNACT1-201ENST00000332246 STIM2Q9P246 746 aa10.75□□□□□ -0.69
CSGALNACT1-201ENST00000332246 MTRF1LQ9UGC7 380 aaKnown RBP10.75□□□□□ -0.69
CSGALNACT1-201ENST00000332246 PCDHA6Q9UN73 950 aa10.75□□□□□ -0.69
CSGALNACT1-201ENST00000332246 SNX24Q9Y343 169 aa10.75□□□□□ -0.69
CSGALNACT1-201ENST00000332246 PCDHA8Q9Y5H6 950 aa10.75□□□□□ -0.69
CSGALNACT1-201ENST00000332246 CAPN6Q9Y6Q1 641 aa10.75□□□□□ -0.69
CSGALNACT1-201ENST00000332246 ABCC12Q96J65 1359 aa10.75□□□□□ -0.69
CSGALNACT1-201ENST00000332246 CARSP49589 748 aaKnown RBP10.75□□□□□ -0.69
CSGALNACT1-201ENST00000332246 CERKLQ49MI3 558 aaPredicted RBP10.75□□□□□ -0.69
CSGALNACT1-201ENST00000332246 KAZNQ674X7 775 aa10.75□□□□□ -0.69
CSGALNACT1-201ENST00000332246 MIGA2Q7L4E1 593 aa10.75□□□□□ -0.69
CSGALNACT1-201ENST00000332246 OGFOD1Q8N543 542 aa10.75□□□□□ -0.69
CSGALNACT1-201ENST00000332246 ANKS4BQ8N8V4 417 aa10.75□□□□□ -0.69
CSGALNACT1-201ENST00000332246 MAGOHBQ96A72 148 aaKnown RBP10.75□□□□□ -0.69
CSGALNACT1-201ENST00000332246 RASAL2Q9UJF2 1139 aa10.75□□□□□ -0.69
CSGALNACT1-201ENST00000332246 FAM184BQ9ULE4 1060 aa10.75□□□□□ -0.69
CSGALNACT1-201ENST00000332246 GINS2Q9Y248 185 aa10.75□□□□□ -0.69
CSGALNACT1-201ENST00000332246 RGS16O15492 202 aaPredicted RBP10.74□□□□□ -0.69
CSGALNACT1-201ENST00000332246 MYCNP04198 464 aaPredicted RBP10.74□□□□□ -0.69
CSGALNACT1-201ENST00000332246 POTEJP0CG39 1038 aa10.74□□□□□ -0.69
CSGALNACT1-201ENST00000332246 ZBTB16Q05516 673 aa10.74□□□□□ -0.69
CSGALNACT1-201ENST00000332246 FAM133BQ5BKY9 247 aaKnown RBP10.74□□□□□ -0.69
CSGALNACT1-201ENST00000332246 BEND6Q5SZJ8 279 aaPredicted RBP10.74□□□□□ -0.69
CSGALNACT1-201ENST00000332246 SEL1L2Q5TEA6 688 aa10.74□□□□□ -0.69
CSGALNACT1-201ENST00000332246 CCDC170Q8IYT3 715 aa10.74□□□□□ -0.69
CSGALNACT1-201ENST00000332246 ADSSL1Q8N142 457 aa10.74□□□□□ -0.69
CSGALNACT1-201ENST00000332246 FBF1Q8TES7 1133 aa10.74□□□□□ -0.69
CSGALNACT1-201ENST00000332246 SYNCQ9H7C4 482 aa10.74□□□□□ -0.69
CSGALNACT1-201ENST00000332246 SERPINB13Q9UIV8 391 aa10.74□□□□□ -0.69
CSGALNACT1-201ENST00000332246 HDAC9Q9UKV0 1011 aa10.74□□□□□ -0.69
CSGALNACT1-201ENST00000332246 NCAPD2Q15021 1401 aa10.74□□□□□ -0.69
CSGALNACT1-201ENST00000332246 PDE4DIPQ5VU43 2346 aa10.74□□□□□ -0.69
CSGALNACT1-201ENST00000332246 MYMKA6NI61 221 aa10.74□□□□□ -0.69
CSGALNACT1-201ENST00000332246 ICA1Q05084 483 aa10.74□□□□□ -0.69
CSGALNACT1-201ENST00000332246 MTM1Q13496 603 aa10.74□□□□□ -0.69
CSGALNACT1-201ENST00000332246 CCDC38Q502W7 563 aa10.74□□□□□ -0.69
CSGALNACT1-201ENST00000332246 RPGRIP1Q96KN7 1286 aa10.74□□□□□ -0.69
CSGALNACT1-201ENST00000332246 THAP9Q9H5L6 903 aa10.74□□□□□ -0.69
CSGALNACT1-201ENST00000332246 SALL1Q9NSC2 1324 aa10.74□□□□□ -0.69
CSGALNACT1-201ENST00000332246 RBM12Q9NTZ6 932 aaKnown RBP10.74□□□□□ -0.69
CSGALNACT1-201ENST00000332246 GCNT4Q9P109 453 aa10.74□□□□□ -0.69
CSGALNACT1-201ENST00000332246 AMACRQ9UHK6 382 aa10.74□□□□□ -0.69
CSGALNACT1-201ENST00000332246 PLAAQ9Y263 795 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms