RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 PLA2G4AP47712 749 aa16.18■□□□□ 0.18
TPM3-206ENST00000330188 AOC3Q16853 763 aa16.18■□□□□ 0.18
TPM3-206ENST00000330188 ABCB5Q2M3G0 1257 aa16.18■□□□□ 0.18
TPM3-206ENST00000330188 ZCWPW2Q504Y3 356 aa16.18■□□□□ 0.18
TPM3-206ENST00000330188 CCDC122Q5T0U0 273 aa16.18■□□□□ 0.18
TPM3-206ENST00000330188 POTEBQ6S5H4 581 aa16.18■□□□□ 0.18
TPM3-206ENST00000330188 MOXD1Q6UVY6 613 aa16.18■□□□□ 0.18
TPM3-206ENST00000330188 MYOCDQ8IZQ8 938 aa16.18■□□□□ 0.18
TPM3-206ENST00000330188 TSG101Q99816 390 aa16.18■□□□□ 0.18
TPM3-206ENST00000330188 TDRD3Q9H7E2 651 aaKnown RBP16.18■□□□□ 0.18
TPM3-206ENST00000330188 ANKZF1Q9H8Y5 726 aa16.18■□□□□ 0.18
TPM3-206ENST00000330188 KIAA1024Q9UPX6 916 aa16.18■□□□□ 0.18
TPM3-206ENST00000330188 EPHB6O15197 1021 aa16.18■□□□□ 0.18
TPM3-206ENST00000330188 SLC26A4O43511 780 aa16.18■□□□□ 0.18
TPM3-206ENST00000330188 NDUFB10O96000 172 aa16.18■□□□□ 0.18
TPM3-206ENST00000330188 HNRNPH3P31942 346 aaKnown RBP16.18■□□□□ 0.18
TPM3-206ENST00000330188 SNAP25P60880 206 aa16.18■□□□□ 0.18
TPM3-206ENST00000330188 FAM26FQ5R3K3 315 aa16.18■□□□□ 0.18
TPM3-206ENST00000330188 JAKMIP2Q96AA8 810 aa16.18■□□□□ 0.18
TPM3-206ENST00000330188 GMCL1Q96IK5 515 aa16.18■□□□□ 0.18
TPM3-206ENST00000330188 AMNQ9BXJ7 453 aa16.18■□□□□ 0.18
TPM3-206ENST00000330188 MYO6Q9UM54 1294 aa16.18■□□□□ 0.18
TPM3-206ENST00000330188 RCCD1A6NED2 376 aa16.17■□□□□ 0.18
TPM3-206ENST00000330188 TBC1D8O95759 1140 aa16.17■□□□□ 0.18
TPM3-206ENST00000330188 SSBP05455 408 aaKnown RBP eCLIP16.17■□□□□ 0.18
TPM3-206ENST00000330188 PLA2G4BP0C869 781 aa16.17■□□□□ 0.18
TPM3-206ENST00000330188 CHRNA5P30532 468 aa16.17■□□□□ 0.18
TPM3-206ENST00000330188 JAG1P78504 1218 aa16.17■□□□□ 0.18
TPM3-206ENST00000330188 ARHGAP4P98171 946 aa16.17■□□□□ 0.18
TPM3-206ENST00000330188 KIAA1328Q86T90 577 aa16.17■□□□□ 0.18
TPM3-206ENST00000330188 ETNPPLQ8TBG4 499 aa16.17■□□□□ 0.18
TPM3-206ENST00000330188 ST7Q9NRC1 585 aa16.17■□□□□ 0.18
TPM3-206ENST00000330188 KRT86O43790 486 aa16.16■□□□□ 0.18
TPM3-206ENST00000330188 MED24O75448 989 aa16.16■□□□□ 0.18
TPM3-206ENST00000330188 SASH3O75995 380 aa16.16■□□□□ 0.18
TPM3-206ENST00000330188 STAT3P40763 770 aa16.16■□□□□ 0.18
TPM3-206ENST00000330188 TRAPPC11Q7Z392 1133 aa16.16■□□□□ 0.18
TPM3-206ENST00000330188 SLFN12Q8IYM2 578 aa16.16■□□□□ 0.18
TPM3-206ENST00000330188 MSANTD4Q8NCY6 345 aa16.16■□□□□ 0.18
TPM3-206ENST00000330188 C7orf43Q8WVR3 580 aa16.16■□□□□ 0.18
TPM3-206ENST00000330188 FGFBP2Q9BYJ0 223 aa16.16■□□□□ 0.18
TPM3-206ENST00000330188 LACRTQ9GZZ8 138 aa16.16■□□□□ 0.18
TPM3-206ENST00000330188 ARFGAP3Q9NP61 516 aa16.16■□□□□ 0.18
TPM3-206ENST00000330188 BMP2KQ9NSY1 1161 aaPredicted RBP16.16■□□□□ 0.18
TPM3-206ENST00000330188 PLAGL2Q9UPG8 496 aa16.16■□□□□ 0.18
TPM3-206ENST00000330188 PCDHA2Q9Y5H9 948 aa16.16■□□□□ 0.18
TPM3-206ENST00000330188 ENTPD3O75355 529 aa16.16■□□□□ 0.18
TPM3-206ENST00000330188 CYP11B2P19099 503 aa16.16■□□□□ 0.18
TPM3-206ENST00000330188 MMP14P50281 582 aa16.16■□□□□ 0.18
TPM3-206ENST00000330188 TUBB4BP68371 445 aa16.16■□□□□ 0.18
TPM3-206ENST00000330188 SPIRE1Q08AE8 756 aa16.16■□□□□ 0.18
TPM3-206ENST00000330188 SYDE2Q5VT97 1194 aa16.16■□□□□ 0.18
TPM3-206ENST00000330188 GPBP1Q86WP2 473 aa16.16■□□□□ 0.18
TPM3-206ENST00000330188 FBXO11Q86XK2 927 aa16.16■□□□□ 0.18
TPM3-206ENST00000330188 CCDC65Q8IXS2 484 aa16.16■□□□□ 0.18
TPM3-206ENST00000330188 FAM207AQ9NSI2 230 aaPredicted RBP16.16■□□□□ 0.18
TPM3-206ENST00000330188 COL2A1P02458 1487 aaPredicted RBP16.16■□□□□ 0.18
TPM3-206ENST00000330188 NPHP3-ACAD11A0A0J9YXS1 232 aa16.15■□□□□ 0.18
TPM3-206ENST00000330188 CTAGE15A4D2H0 777 aa16.15■□□□□ 0.18
TPM3-206ENST00000330188 CCDC151A5D8V7 595 aa16.15■□□□□ 0.18
TPM3-206ENST00000330188 POTEB2H3BUK9 544 aa16.15■□□□□ 0.18
TPM3-206ENST00000330188 IPO7O95373 1038 aaKnown RBP16.15■□□□□ 0.18
TPM3-206ENST00000330188 GH2P01242 217 aa16.15■□□□□ 0.18
TPM3-206ENST00000330188 CTAGE8P0CG41 777 aa16.15■□□□□ 0.18
TPM3-206ENST00000330188 FKBP3Q00688 224 aaKnown RBP16.15■□□□□ 0.18
TPM3-206ENST00000330188 RRP1BQ14684 758 aaKnown RBP16.15■□□□□ 0.18
TPM3-206ENST00000330188 BRD3Q15059 726 aa16.15■□□□□ 0.18
TPM3-206ENST00000330188 USH1GQ495M9 461 aa16.15■□□□□ 0.18
TPM3-206ENST00000330188 MCTP2Q6DN12 878 aa16.15■□□□□ 0.18
TPM3-206ENST00000330188 CTAGE6Q86UF2 777 aa16.15■□□□□ 0.18
TPM3-206ENST00000330188 CCDC84Q86UT8 332 aaPredicted RBP16.15■□□□□ 0.18
TPM3-206ENST00000330188 CTAGE4Q8IX94 777 aa16.15■□□□□ 0.18
TPM3-206ENST00000330188 PURBQ96QR8 312 aaKnown RBP16.15■□□□□ 0.18
TPM3-206ENST00000330188 MMRN2Q9H8L6 949 aa16.15■□□□□ 0.18
TPM3-206ENST00000330188 RAB21Q9UL25 225 aa16.15■□□□□ 0.18
TPM3-206ENST00000330188 TNS1Q9HBL0 1735 aaKnown RBP16.15■□□□□ 0.18
TPM3-206ENST00000330188 PSME4Q14997 1843 aa16.15■□□□□ 0.18
TPM3-206ENST00000330188 ENC1O14682 589 aa16.15■□□□□ 0.18
TPM3-206ENST00000330188 ZNF263O14978 683 aa16.15■□□□□ 0.18
TPM3-206ENST00000330188 ATP1A1P05023 1023 aaKnown RBP16.15■□□□□ 0.18
TPM3-206ENST00000330188 PLEKP08567 350 aaPredicted RBP16.15■□□□□ 0.18
TPM3-206ENST00000330188 BMP3P12645 472 aa16.15■□□□□ 0.18
TPM3-206ENST00000330188 SLC12A3P55017 1021 aa16.15■□□□□ 0.18
TPM3-206ENST00000330188 CYP27A1Q02318 531 aa16.15■□□□□ 0.18
TPM3-206ENST00000330188 Q4G0T1 1027 aa16.15■□□□□ 0.18
TPM3-206ENST00000330188 RBM26Q5T8P6 1007 aaKnown RBP16.15■□□□□ 0.18
TPM3-206ENST00000330188 BTNL9Q6UXG8 535 aa16.15■□□□□ 0.18
TPM3-206ENST00000330188 EHBP1Q8NDI1 1231 aa16.15■□□□□ 0.18
TPM3-206ENST00000330188 CNKSR1Q969H4 720 aa16.15■□□□□ 0.18
TPM3-206ENST00000330188 LENG9Q96B70 501 aa16.15■□□□□ 0.18
TPM3-206ENST00000330188 PRMT6Q96LA8 375 aaPredicted RBP16.15■□□□□ 0.18
TPM3-206ENST00000330188 TBC1D7Q9P0N9 293 aa16.15■□□□□ 0.18
TPM3-206ENST00000330188 ARHGAP20Q9P2F6 1191 aa16.15■□□□□ 0.18
TPM3-206ENST00000330188 COL4A3BPQ9Y5P4 624 aa16.15■□□□□ 0.18
TPM3-206ENST00000330188 FRMD3A2A2Y4 597 aa16.14■□□□□ 0.17
TPM3-206ENST00000330188 YDJCA8MPS7 323 aa16.14■□□□□ 0.17
TPM3-206ENST00000330188 TBX3O15119 743 aa16.14■□□□□ 0.17
TPM3-206ENST00000330188 TAL1P17542 331 aaPredicted RBP16.14■□□□□ 0.17
TPM3-206ENST00000330188 ERCC3P19447 782 aa16.14■□□□□ 0.17
TPM3-206ENST00000330188 SREBF1P36956 1147 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms