RNA–Protein interactions for RNA: ENST00000329291.5

PGBD2-201, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PGBD2, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-201ENST00000329291 APOBEC3FQ8IUX4 373 aaKnown RBP17.71■□□□□ 0.43
PGBD2-201ENST00000329291 REXO1L1PQ8IX06 675 aa17.71■□□□□ 0.43
PGBD2-201ENST00000329291 GPC2Q8N158 579 aa17.71■□□□□ 0.43
PGBD2-201ENST00000329291 WDR18Q9BV38 432 aa17.71■□□□□ 0.43
PGBD2-201ENST00000329291 FHDC1Q9C0D6 1143 aaPredicted RBP17.71■□□□□ 0.43
PGBD2-201ENST00000329291 FZD1Q9UP38 647 aa17.71■□□□□ 0.43
PGBD2-201ENST00000329291 ZNF536O15090 1300 aa17.71■□□□□ 0.43
PGBD2-201ENST00000329291 GCOM1H8Y6P7 765 aaPredicted RBP17.71■□□□□ 0.42
PGBD2-201ENST00000329291 TBX3O15119 743 aa17.71■□□□□ 0.42
PGBD2-201ENST00000329291 PLA2G4BP0C869 781 aa17.71■□□□□ 0.42
PGBD2-201ENST00000329291 POLR2MP0CAP2 368 aa17.71■□□□□ 0.42
PGBD2-201ENST00000329291 MTF1Q14872 753 aa17.71■□□□□ 0.42
PGBD2-201ENST00000329291 COBLL1Q53SF7 1204 aa17.71■□□□□ 0.42
PGBD2-201ENST00000329291 DCAF15Q66K64 600 aa17.71■□□□□ 0.42
PGBD2-201ENST00000329291 NCAPH2Q6IBW4 605 aa17.71■□□□□ 0.42
PGBD2-201ENST00000329291 FAM160B2Q86V87 743 aa17.71■□□□□ 0.42
PGBD2-201ENST00000329291 ZNF507Q8TCN5 953 aa17.71■□□□□ 0.42
PGBD2-201ENST00000329291 HOOK2Q96ED9 719 aa17.71■□□□□ 0.42
PGBD2-201ENST00000329291 VAV3Q9UKW4 847 aa17.71■□□□□ 0.42
PGBD2-201ENST00000329291 MEIS1O00470 390 aa17.7■□□□□ 0.42
PGBD2-201ENST00000329291 NRDCO43847 1150 aa17.7■□□□□ 0.42
PGBD2-201ENST00000329291 STX10O60499 249 aa17.7■□□□□ 0.42
PGBD2-201ENST00000329291 CTNND1O60716 968 aaKnown RBP17.7■□□□□ 0.42
PGBD2-201ENST00000329291 CACNB1Q02641 598 aaPredicted RBP17.7■□□□□ 0.42
PGBD2-201ENST00000329291 UBXN1Q04323 297 aa17.7■□□□□ 0.42
PGBD2-201ENST00000329291 ARSHQ5FYA8 562 aa17.7■□□□□ 0.42
PGBD2-201ENST00000329291 CENPPQ6IPU0 288 aa17.7■□□□□ 0.42
PGBD2-201ENST00000329291 PPFIBP1Q86W92 1011 aa17.7■□□□□ 0.42
PGBD2-201ENST00000329291 FGFBP2Q9BYJ0 223 aa17.7■□□□□ 0.42
PGBD2-201ENST00000329291 NT5C3AQ9H0P0 336 aa17.7■□□□□ 0.42
PGBD2-201ENST00000329291 GPRC5DQ9NZD1 345 aa17.7■□□□□ 0.42
PGBD2-201ENST00000329291 EML1O00423 815 aa17.69■□□□□ 0.42
PGBD2-201ENST00000329291 ARHGAP6O43182 974 aa17.69■□□□□ 0.42
PGBD2-201ENST00000329291 ZNF76P36508 570 aa17.69■□□□□ 0.42
PGBD2-201ENST00000329291 PANX2Q96RD6 677 aa17.69■□□□□ 0.42
PGBD2-201ENST00000329291 ITIH6Q6UXX5 1313 aa17.69■□□□□ 0.42
PGBD2-201ENST00000329291 KDM3AQ9Y4C1 1321 aa17.69■□□□□ 0.42
PGBD2-201ENST00000329291 MFAP3LO75121 409 aa17.69■□□□□ 0.42
PGBD2-201ENST00000329291 EEF1GP26641 437 aaKnown RBP17.69■□□□□ 0.42
PGBD2-201ENST00000329291 GTF2F1P35269 517 aaKnown RBP eCLIP17.69■□□□□ 0.421e-15■■■■■ 63.3
PGBD2-201ENST00000329291 RAD51AP2Q09MP3 1159 aa17.69■□□□□ 0.42
PGBD2-201ENST00000329291 ANGEL2Q5VTE6 544 aaKnown RBP17.69■□□□□ 0.42
PGBD2-201ENST00000329291 MB21D1Q8N884 522 aa17.69■□□□□ 0.42
PGBD2-201ENST00000329291 FAM20AQ96MK3 541 aa17.69■□□□□ 0.42
PGBD2-201ENST00000329291 MRPL11Q9Y3B7 192 aaKnown RBP17.69■□□□□ 0.42
PGBD2-201ENST00000329291 SOWAHDA6NJG2 315 aa17.68■□□□□ 0.42
PGBD2-201ENST00000329291 CYP11B2P19099 503 aa17.68■□□□□ 0.42
PGBD2-201ENST00000329291 SLC12A3P55017 1021 aa17.68■□□□□ 0.42
PGBD2-201ENST00000329291 COASYQ13057 564 aa17.68■□□□□ 0.42
PGBD2-201ENST00000329291 ANKRD20A12PQ8NF67 263 aa17.68■□□□□ 0.42
PGBD2-201ENST00000329291 TBC1D7Q9P0N9 293 aa17.68■□□□□ 0.42
PGBD2-201ENST00000329291 PPP2R2CQ9Y2T4 447 aa17.68■□□□□ 0.42
PGBD2-201ENST00000329291 ATAD5Q96QE3 1844 aa17.68■□□□□ 0.42
PGBD2-201ENST00000329291 BICDL2A1A5D9 508 aa17.68■□□□□ 0.42
PGBD2-201ENST00000329291 LGALS16A8MUM7 142 aa17.68■□□□□ 0.42
PGBD2-201ENST00000329291 RAD9BQ6WBX8 426 aa17.68■□□□□ 0.42
PGBD2-201ENST00000329291 GPBP1Q86WP2 473 aa17.68■□□□□ 0.42
PGBD2-201ENST00000329291 TEX2Q8IWB9 1127 aa17.68■□□□□ 0.42
PGBD2-201ENST00000329291 GUF1Q8N442 669 aaKnown RBP17.68■□□□□ 0.42
PGBD2-201ENST00000329291 TRPM4Q8TD43 1214 aa17.68■□□□□ 0.42
PGBD2-201ENST00000329291 TUBGCP2Q9BSJ2 902 aa17.68■□□□□ 0.42
PGBD2-201ENST00000329291 DESI2Q9BSY9 194 aa17.68■□□□□ 0.42
PGBD2-201ENST00000329291 LRRC27Q9C0I9 530 aa17.68■□□□□ 0.42
PGBD2-201ENST00000329291 KIAA1683Q9H0B3 1180 aa17.68■□□□□ 0.42
PGBD2-201ENST00000329291 EMILIN3Q9NT22 766 aa17.68■□□□□ 0.42
PGBD2-201ENST00000329291 PANK4Q9NVE7 773 aa17.68■□□□□ 0.42
PGBD2-201ENST00000329291 PCDHA2Q9Y5H9 948 aa17.68■□□□□ 0.42
PGBD2-201ENST00000329291 B4DLN1 442 aa17.67■□□□□ 0.42
PGBD2-201ENST00000329291 RPA1P27694 616 aa17.67■□□□□ 0.42
PGBD2-201ENST00000329291 CYP4A11Q02928 519 aa17.67■□□□□ 0.42
PGBD2-201ENST00000329291 TRIM65Q6PJ69 517 aa17.67■□□□□ 0.42
PGBD2-201ENST00000329291 NOC3LQ8WTT2 800 aaKnown RBP17.67■□□□□ 0.42
PGBD2-201ENST00000329291 LPAR1Q92633 364 aa17.67■□□□□ 0.42
PGBD2-201ENST00000329291 CNOT6LQ96LI5 555 aaKnown RBP17.67■□□□□ 0.42
PGBD2-201ENST00000329291 RGL1Q9NZL6 768 aa17.67■□□□□ 0.42
PGBD2-201ENST00000329291 COL20A1Q9P218 1284 aa17.67■□□□□ 0.42
PGBD2-201ENST00000329291 PAXBP1Q9Y5B6 917 aa17.67■□□□□ 0.42
PGBD2-201ENST00000329291 DICER1Q9UPY3 1922 aaKnown RBP17.67■□□□□ 0.42
PGBD2-201ENST00000329291 RASSF10A6NK89 507 aa17.66■□□□□ 0.42
PGBD2-201ENST00000329291 NFIBO00712 420 aa17.66■□□□□ 0.42
PGBD2-201ENST00000329291 DYNC1I1O14576 645 aa17.66■□□□□ 0.42
PGBD2-201ENST00000329291 FANCGO15287 622 aa17.66■□□□□ 0.42
PGBD2-201ENST00000329291 ICAM1P05362 532 aa17.66■□□□□ 0.42
PGBD2-201ENST00000329291 MIIPQ5JXC2 388 aa17.66■□□□□ 0.42
PGBD2-201ENST00000329291 SYT10Q6XYQ8 523 aa17.66■□□□□ 0.42
PGBD2-201ENST00000329291 PRPF38AQ8NAV1 312 aaKnown RBP17.66■□□□□ 0.42
PGBD2-201ENST00000329291 CLEC4DQ8WXI8 215 aa17.66■□□□□ 0.42
PGBD2-201ENST00000329291 ZKSCAN4Q969J2 545 aaPredicted RBP17.66■□□□□ 0.42
PGBD2-201ENST00000329291 SLF1Q9BQI6 1058 aa17.66■□□□□ 0.42
PGBD2-201ENST00000329291 GTPBP4Q9BZE4 634 aaKnown RBP17.66■□□□□ 0.42
PGBD2-201ENST00000329291 MAGEC2Q9UBF1 373 aaPredicted RBP17.66■□□□□ 0.42
PGBD2-201ENST00000329291 CCPG1Q9ULG6 757 aa17.66■□□□□ 0.42
PGBD2-201ENST00000329291 ABCB11O95342 1321 aa17.66■□□□□ 0.42
PGBD2-201ENST00000329291 PES1O00541 588 aaKnown RBP17.66■□□□□ 0.42
PGBD2-201ENST00000329291 WDR46O15213 610 aaKnown RBP17.66■□□□□ 0.42
PGBD2-201ENST00000329291 RBM10P98175 930 aaKnown RBP17.66■□□□□ 0.42
PGBD2-201ENST00000329291 PSMD2Q13200 908 aa17.66■□□□□ 0.42
PGBD2-201ENST00000329291 PABPC4Q13310 644 aaKnown RBP eCLIP17.66■□□□□ 0.42
PGBD2-201ENST00000329291 MTMR2Q13614 643 aa17.66■□□□□ 0.42
PGBD2-201ENST00000329291 OTOP1Q7RTM1 612 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms