RNA–Protein interactions for RNA: ENST00000326828.5

CHRNA3-201, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA3, Length 3,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-201ENST00000326828 PDXDC1Q6P996 788 aa15.72■□□□□ 0.11
CHRNA3-201ENST00000326828 CCDC84Q86UT8 332 aaPredicted RBP15.72■□□□□ 0.11
CHRNA3-201ENST00000326828 BAP1Q92560 729 aa15.72■□□□□ 0.11
CHRNA3-201ENST00000326828 CCSER1Q9C0I3 900 aa15.72■□□□□ 0.11
CHRNA3-201ENST00000326828 GDF3Q9NR23 364 aa15.72■□□□□ 0.11
CHRNA3-201ENST00000326828 MAGOHP61326 146 aaKnown RBP15.72■□□□□ 0.11
CHRNA3-201ENST00000326828 AMPD3Q01432 767 aa15.72■□□□□ 0.11
CHRNA3-201ENST00000326828 SLC35G1Q2M3R5 365 aa15.72■□□□□ 0.11
CHRNA3-201ENST00000326828 KRT71Q3SY84 523 aa15.72■□□□□ 0.11
CHRNA3-201ENST00000326828 FAM83BQ5T0W9 1011 aa15.72■□□□□ 0.11
CHRNA3-201ENST00000326828 MAGOHBQ96A72 148 aaKnown RBP15.72■□□□□ 0.11
CHRNA3-201ENST00000326828 UBA5Q9GZZ9 404 aa15.72■□□□□ 0.11
CHRNA3-201ENST00000326828 BAIAP2L1Q9UHR4 511 aa15.72■□□□□ 0.11
CHRNA3-201ENST00000326828 GGT7Q9UJ14 662 aa15.72■□□□□ 0.11
CHRNA3-201ENST00000326828 GOLGB1Q14789 3259 aaKnown RBP15.72■□□□□ 0.11
CHRNA3-201ENST00000326828 SMCO2A6NFE2 343 aa15.72■□□□□ 0.11
CHRNA3-201ENST00000326828 TLR2O60603 784 aa15.72■□□□□ 0.11
CHRNA3-201ENST00000326828 IFFO1Q0D2I5 559 aa15.72■□□□□ 0.11
CHRNA3-201ENST00000326828 ZSCAN29Q8IWY8 852 aaPredicted RBP15.72■□□□□ 0.11
CHRNA3-201ENST00000326828 TBCKQ8TEA7 893 aa15.72■□□□□ 0.11
CHRNA3-201ENST00000326828 NUDT12Q9BQG2 462 aa15.72■□□□□ 0.11
CHRNA3-201ENST00000326828 CELF4Q9BZC1 486 aaKnown RBP15.72■□□□□ 0.11
CHRNA3-201ENST00000326828 CRNKL1Q9BZJ0 848 aaKnown RBP15.72■□□□□ 0.11
CHRNA3-201ENST00000326828 NEUROG2Q9H2A3 272 aa15.72■□□□□ 0.11
CHRNA3-201ENST00000326828 AMACRQ9UHK6 382 aa15.72■□□□□ 0.11
CHRNA3-201ENST00000326828 FBXL5Q9UKA1 691 aa15.72■□□□□ 0.11
CHRNA3-201ENST00000326828 FLT1P17948 1338 aa15.71■□□□□ 0.11
CHRNA3-201ENST00000326828 A0A1W2PQJ5 194 aa15.71■□□□□ 0.11
CHRNA3-201ENST00000326828 GMNCA6NCL1 334 aa15.71■□□□□ 0.11
CHRNA3-201ENST00000326828 DAPK3O43293 454 aa15.71■□□□□ 0.11
CHRNA3-201ENST00000326828 TSPY3P0CV98 308 aa15.71■□□□□ 0.11
CHRNA3-201ENST00000326828 TSPY8P0CW00 308 aa15.71■□□□□ 0.11
CHRNA3-201ENST00000326828 ACTN1P12814 892 aa15.71■□□□□ 0.11
CHRNA3-201ENST00000326828 PRLRP16471 622 aa15.71■□□□□ 0.11
CHRNA3-201ENST00000326828 COPB2P35606 906 aa15.71■□□□□ 0.11
CHRNA3-201ENST00000326828 USP17L2Q6R6M4 530 aa15.71■□□□□ 0.11
CHRNA3-201ENST00000326828 TEX2Q8IWB9 1127 aa15.71■□□□□ 0.11
CHRNA3-201ENST00000326828 OSBPL7Q9BZF2 842 aa15.71■□□□□ 0.11
CHRNA3-201ENST00000326828 IL17RBQ9NRM6 502 aa15.71■□□□□ 0.11
CHRNA3-201ENST00000326828 CEP83Q9Y592 693 aa15.71■□□□□ 0.11
CHRNA3-201ENST00000326828 SKAP2O75563 359 aaPredicted RBP15.71■□□□□ 0.11
CHRNA3-201ENST00000326828 TNNC1P63316 161 aa15.71■□□□□ 0.11
CHRNA3-201ENST00000326828 RPS6KA1Q15418 735 aa15.71■□□□□ 0.11
CHRNA3-201ENST00000326828 SLC24A3Q9HC58 644 aa15.71■□□□□ 0.11
CHRNA3-201ENST00000326828 CNOT8Q9UFF9 292 aaKnown RBP15.71■□□□□ 0.11
CHRNA3-201ENST00000326828 ITGA4P13612 1032 aa15.7■□□□□ 0.1
CHRNA3-201ENST00000326828 KCNMA1Q12791 1236 aa15.7■□□□□ 0.1
CHRNA3-201ENST00000326828 NEDD9Q14511 834 aa15.7■□□□□ 0.1
CHRNA3-201ENST00000326828 SNCBQ16143 134 aa15.7■□□□□ 0.1
CHRNA3-201ENST00000326828 TMED8Q6PL24 325 aaPredicted RBP15.7■□□□□ 0.1
CHRNA3-201ENST00000326828 BRIP1Q9BX63 1249 aa15.7■□□□□ 0.1
CHRNA3-201ENST00000326828 CCDC113Q9H0I3 377 aa15.7■□□□□ 0.1
CHRNA3-201ENST00000326828 HMGB1P1B2RPK0 211 aaPredicted RBP15.7■□□□□ 0.1
CHRNA3-201ENST00000326828 HGSNATQ68CP4 663 aa15.7■□□□□ 0.1
CHRNA3-201ENST00000326828 CYB5D1Q6P9G0 228 aa15.7■□□□□ 0.1
CHRNA3-201ENST00000326828 C3orf67Q6ZVT6 689 aa15.7■□□□□ 0.1
CHRNA3-201ENST00000326828 PNMA8AQ86V59 439 aaPredicted RBP15.7■□□□□ 0.1
CHRNA3-201ENST00000326828 SELENOSQ9BQE4 189 aa15.7■□□□□ 0.1
CHRNA3-201ENST00000326828 KLRF2D3W0D1 207 aa15.7■□□□□ 0.1
CHRNA3-201ENST00000326828 ELF1P32519 619 aa15.7■□□□□ 0.1
CHRNA3-201ENST00000326828 CDK17Q00537 523 aa15.7■□□□□ 0.1
CHRNA3-201ENST00000326828 NONOQ15233 471 aaKnown RBP eCLIP15.7■□□□□ 0.1
CHRNA3-201ENST00000326828 CDC37Q16543 378 aaPredicted RBP15.7■□□□□ 0.1
CHRNA3-201ENST00000326828 CENPPQ6IPU0 288 aa15.7■□□□□ 0.1
CHRNA3-201ENST00000326828 KCNK18Q7Z418 384 aa15.7■□□□□ 0.1
CHRNA3-201ENST00000326828 PARP9Q8IXQ6 854 aa15.7■□□□□ 0.1
CHRNA3-201ENST00000326828 DDX12PQ92771 950 aa15.7■□□□□ 0.1
CHRNA3-201ENST00000326828 ACSBG1Q96GR2 724 aa15.7■□□□□ 0.1
CHRNA3-201ENST00000326828 MMTAG2Q9BU76 263 aaKnown RBP15.7■□□□□ 0.1
CHRNA3-201ENST00000326828 FGFBP2Q9BYJ0 223 aa15.7■□□□□ 0.1
CHRNA3-201ENST00000326828 TAF1DQ9H5J8 278 aaPredicted RBP15.7■□□□□ 0.1
CHRNA3-201ENST00000326828 ATP8A1Q9Y2Q0 1164 aa15.7■□□□□ 0.1
CHRNA3-201ENST00000326828 CAMTA1Q9Y6Y1 1673 aa15.69■□□□□ 0.1
CHRNA3-201ENST00000326828 ITIH3Q06033 890 aa15.69■□□□□ 0.1
CHRNA3-201ENST00000326828 NAA25Q14CX7 972 aa15.69■□□□□ 0.1
CHRNA3-201ENST00000326828 SOGA3Q5TF21 947 aa15.69■□□□□ 0.1
CHRNA3-201ENST00000326828 SNX29Q8TEQ0 813 aa15.69■□□□□ 0.1
CHRNA3-201ENST00000326828 TCP11Q8WWU5 503 aa15.69■□□□□ 0.1
CHRNA3-201ENST00000326828 SEC16BQ96JE7 1060 aa15.69■□□□□ 0.1
CHRNA3-201ENST00000326828 LEMD3Q9Y2U8 911 aa15.69■□□□□ 0.1
CHRNA3-201ENST00000326828 GRID2IPA4D2P6 1211 aa15.69■□□□□ 0.1
CHRNA3-201ENST00000326828 STXBP3O00186 592 aa15.69■□□□□ 0.1
CHRNA3-201ENST00000326828 SMTNP53814 917 aa15.69■□□□□ 0.1
CHRNA3-201ENST00000326828 ZNF844Q08AG5 666 aa15.69■□□□□ 0.1
CHRNA3-201ENST00000326828 NKX1-1Q15270 411 aaPredicted RBP15.69■□□□□ 0.1
CHRNA3-201ENST00000326828 PPP1R7Q15435 360 aa15.69■□□□□ 0.1
CHRNA3-201ENST00000326828 UAP1Q16222 522 aaPredicted RBP15.69■□□□□ 0.1
CHRNA3-201ENST00000326828 GLE1Q53GS7 698 aaKnown RBP15.69■□□□□ 0.1
CHRNA3-201ENST00000326828 FIGNQ5HY92 759 aa15.69■□□□□ 0.1
CHRNA3-201ENST00000326828 ZNF34Q8IZ26 560 aa15.69■□□□□ 0.1
CHRNA3-201ENST00000326828 CACNA2D3Q8IZS8 1091 aa15.69■□□□□ 0.1
CHRNA3-201ENST00000326828 USP38Q8NB14 1042 aa15.69■□□□□ 0.1
CHRNA3-201ENST00000326828 C7orf25Q9BPX7 421 aa15.69■□□□□ 0.1
CHRNA3-201ENST00000326828 TMBIM4Q9HC24 238 aa15.69■□□□□ 0.1
CHRNA3-201ENST00000326828 LMTK3Q96Q04 1460 aa15.69■□□□□ 0.1
CHRNA3-201ENST00000326828 NPHP3-ACAD11A0A0J9YXS1 232 aa15.68■□□□□ 0.1
CHRNA3-201ENST00000326828 EIF4E1BA6NMX2 242 aaKnown RBP15.68■□□□□ 0.1
CHRNA3-201ENST00000326828 KRIT1O00522 736 aa15.68■□□□□ 0.1
CHRNA3-201ENST00000326828 SART1O43290 800 aaKnown RBP15.68■□□□□ 0.1
CHRNA3-201ENST00000326828 TDP2O95551 362 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms