RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 EXOC1LA0A1B0GW35 172 aa7.64□□□□□ -1.19
SMC1A-201ENST00000322213 H0Y3Z8 333 aa7.64□□□□□ -1.19
SMC1A-201ENST00000322213 CPP00450 1065 aa7.64□□□□□ -1.19
SMC1A-201ENST00000322213 KCNA4P22459 653 aa7.64□□□□□ -1.19
SMC1A-201ENST00000322213 EEF1DP29692 281 aaKnown RBP7.64□□□□□ -1.19
SMC1A-201ENST00000322213 GSPT2Q8IYD1 628 aaKnown RBP7.64□□□□□ -1.19
SMC1A-201ENST00000322213 USHBP1Q8N6Y0 703 aa7.64□□□□□ -1.19
SMC1A-201ENST00000322213 GABPB2Q8TAK5 448 aaPredicted RBP7.64□□□□□ -1.19
SMC1A-201ENST00000322213 TRAIPQ9BWF2 469 aa7.64□□□□□ -1.19
SMC1A-201ENST00000322213 PITPNM3Q9BZ71 974 aa7.64□□□□□ -1.19
SMC1A-201ENST00000322213 DPH5Q9H2P9 285 aa7.64□□□□□ -1.19
SMC1A-201ENST00000322213 CD248Q9HCU0 757 aa7.64□□□□□ -1.19
SMC1A-201ENST00000322213 ATP5J2-PTCD1G3V325 749 aa7.64□□□□□ -1.19
SMC1A-201ENST00000322213 PTCD1O75127 700 aaKnown RBP7.64□□□□□ -1.19
SMC1A-201ENST00000322213 CRCPO75575 148 aa7.64□□□□□ -1.19
SMC1A-201ENST00000322213 RARS2Q5T160 578 aaKnown RBP7.64□□□□□ -1.19
SMC1A-201ENST00000322213 OTUD6AQ7L8S5 288 aa7.64□□□□□ -1.19
SMC1A-201ENST00000322213 ENAHQ8N8S7 591 aaPredicted RBP7.64□□□□□ -1.19
SMC1A-201ENST00000322213 RSAD2Q8WXG1 361 aa7.64□□□□□ -1.19
SMC1A-201ENST00000322213 SIRT1Q96EB6 747 aa7.64□□□□□ -1.19
SMC1A-201ENST00000322213 KCNG1Q9UIX4 513 aa7.64□□□□□ -1.19
SMC1A-201ENST00000322213 NOC2LQ9Y3T9 749 aaKnown RBP7.64□□□□□ -1.19
SMC1A-201ENST00000322213 MRPL12P52815 198 aaKnown RBP7.64□□□□□ -1.19
SMC1A-201ENST00000322213 KRT80Q6KB66 452 aa7.64□□□□□ -1.19
SMC1A-201ENST00000322213 XAGE3Q8WTP9 111 aa7.64□□□□□ -1.19
SMC1A-201ENST00000322213 MAML3Q96JK9 1138 aa7.64□□□□□ -1.19
SMC1A-201ENST00000322213 LRGUKQ96M69 825 aa7.64□□□□□ -1.19
SMC1A-201ENST00000322213 HINFPQ9BQA5 517 aa7.64□□□□□ -1.19
SMC1A-201ENST00000322213 AATFQ9NY61 560 aaKnown RBP eCLIP7.64□□□□□ -1.19
SMC1A-201ENST00000322213 TSC22D4Q9Y3Q8 395 aa7.64□□□□□ -1.19
SMC1A-201ENST00000322213 WDR81Q562E7 1941 aa7.64□□□□□ -1.19
SMC1A-201ENST00000322213 MYO1FO00160 1098 aa7.64□□□□□ -1.19
SMC1A-201ENST00000322213 GPTP24298 496 aa7.64□□□□□ -1.19
SMC1A-201ENST00000322213 TRAPPC10P48553 1259 aa7.64□□□□□ -1.19
SMC1A-201ENST00000322213 WDR44Q5JSH3 913 aa7.64□□□□□ -1.19
SMC1A-201ENST00000322213 TTLL11Q8NHH1 800 aa7.64□□□□□ -1.19
SMC1A-201ENST00000322213 ELAC2Q9BQ52 826 aaKnown RBP7.64□□□□□ -1.19
SMC1A-201ENST00000322213 FUT8Q9BYC5 575 aa7.64□□□□□ -1.19
SMC1A-201ENST00000322213 MRPL46Q9H2W6 279 aaKnown RBP7.64□□□□□ -1.19
SMC1A-201ENST00000322213 GOLPH3LQ9H4A5 285 aa7.64□□□□□ -1.19
SMC1A-201ENST00000322213 TACC3Q9Y6A5 838 aa7.64□□□□□ -1.19
SMC1A-201ENST00000322213 A0A087WWV3 80 aa7.64□□□□□ -1.19
SMC1A-201ENST00000322213 DIAPH2O60879 1101 aa7.64□□□□□ -1.19
SMC1A-201ENST00000322213 ZPR1O75312 459 aa7.64□□□□□ -1.19
SMC1A-201ENST00000322213 PAPOLAP51003 745 aaKnown RBP7.64□□□□□ -1.19
SMC1A-201ENST00000322213 ITIH4Q14624 930 aa7.64□□□□□ -1.19
SMC1A-201ENST00000322213 WDR93Q6P2C0 686 aa7.64□□□□□ -1.19
SMC1A-201ENST00000322213 MSL3Q8N5Y2 521 aaKnown RBP7.64□□□□□ -1.19
SMC1A-201ENST00000322213 PRPF38AQ8NAV1 312 aaKnown RBP7.64□□□□□ -1.19
SMC1A-201ENST00000322213 SRGAP2O75044 1071 aa7.64□□□□□ -1.19
SMC1A-201ENST00000322213 IL13P35225 146 aa7.64□□□□□ -1.19
SMC1A-201ENST00000322213 CYLC2Q14093 348 aaPredicted RBP7.64□□□□□ -1.19
SMC1A-201ENST00000322213 PSMD6Q15008 389 aa7.64□□□□□ -1.19
SMC1A-201ENST00000322213 IQCB1Q15051 598 aa7.64□□□□□ -1.19
SMC1A-201ENST00000322213 CWF19L2Q2TBE0 894 aaKnown RBP7.64□□□□□ -1.19
SMC1A-201ENST00000322213 LRRC31Q6UY01 552 aa7.64□□□□□ -1.19
SMC1A-201ENST00000322213 TBC1D23Q9NUY8 699 aa7.64□□□□□ -1.19
SMC1A-201ENST00000322213 TMOD2Q9NZR1 351 aa7.64□□□□□ -1.19
SMC1A-201ENST00000322213 GEN1Q17RS7 908 aa7.64□□□□□ -1.19
SMC1A-201ENST00000322213 PDZD8Q8NEN9 1154 aa7.64□□□□□ -1.19
SMC1A-201ENST00000322213 NSMCE1Q8WV22 266 aa7.64□□□□□ -1.19
SMC1A-201ENST00000322213 C17orf50Q8WW18 174 aa7.64□□□□□ -1.19
SMC1A-201ENST00000322213 A1CFQ9NQ94 594 aaKnown RBP7.64□□□□□ -1.19
SMC1A-201ENST00000322213 KDM1AO60341 852 aa7.63□□□□□ -1.19
SMC1A-201ENST00000322213 N4BP1O75113 896 aaKnown RBP7.63□□□□□ -1.19
SMC1A-201ENST00000322213 CYP7A1P22680 504 aa7.63□□□□□ -1.19
SMC1A-201ENST00000322213 VPS41P49754 854 aa7.63□□□□□ -1.19
SMC1A-201ENST00000322213 SPDYE1Q8NFV5 336 aaPredicted RBP7.63□□□□□ -1.19
SMC1A-201ENST00000322213 PPWD1Q96BP3 646 aaKnown RBP7.63□□□□□ -1.19
SMC1A-201ENST00000322213 ETNK1Q9HBU6 452 aa7.63□□□□□ -1.19
SMC1A-201ENST00000322213 CDHR2Q9BYE9 1310 aa7.63□□□□□ -1.19
SMC1A-201ENST00000322213 ATP10DQ9P241 1426 aa7.63□□□□□ -1.19
SMC1A-201ENST00000322213 GCNT3O95395 438 aa7.63□□□□□ -1.19
SMC1A-201ENST00000322213 PALM2Q8IXS6 379 aa7.63□□□□□ -1.19
SMC1A-201ENST00000322213 ZNF579Q8NAF0 562 aaKnown RBP7.63□□□□□ -1.19
SMC1A-201ENST00000322213 NOD2Q9HC29 1040 aa7.63□□□□□ -1.19
SMC1A-201ENST00000322213 TMOD3Q9NYL9 352 aa7.63□□□□□ -1.19
SMC1A-201ENST00000322213 DLC1Q96QB1 1528 aa7.63□□□□□ -1.19
SMC1A-201ENST00000322213 GSCP56915 257 aaPredicted RBP7.63□□□□□ -1.19
SMC1A-201ENST00000322213 DSG1Q02413 1049 aa7.63□□□□□ -1.19
SMC1A-201ENST00000322213 CAV1Q03135 178 aa7.63□□□□□ -1.19
SMC1A-201ENST00000322213 GALNT17Q6IS24 598 aa7.63□□□□□ -1.19
SMC1A-201ENST00000322213 FAM192AQ9GZU8 254 aa7.63□□□□□ -1.19
SMC1A-201ENST00000322213 TRMT112Q9UI30 125 aaKnown RBP7.63□□□□□ -1.19
SMC1A-201ENST00000322213 RGPD5Q99666 1765 aa7.63□□□□□ -1.19
SMC1A-201ENST00000322213 SLC44A4Q53GD3 710 aa7.63□□□□□ -1.19
SMC1A-201ENST00000322213 FAM43BQ6ZT52 329 aaPredicted RBP7.63□□□□□ -1.19
SMC1A-201ENST00000322213 FMR1NBQ8N0W7 255 aaPredicted RBP7.63□□□□□ -1.19
SMC1A-201ENST00000322213 CLIC6Q96NY7 704 aa7.63□□□□□ -1.19
SMC1A-201ENST00000322213 PRMT1Q99873 361 aaKnown RBP7.63□□□□□ -1.19
SMC1A-201ENST00000322213 VAT1LQ9HCJ6 419 aa7.63□□□□□ -1.19
SMC1A-201ENST00000322213 SAMSN1Q9NSI8 373 aaKnown RBP7.63□□□□□ -1.19
SMC1A-201ENST00000322213 HDAC6Q9UBN7 1215 aa7.63□□□□□ -1.19
SMC1A-201ENST00000322213 PACSIN2Q9UNF0 486 aaPredicted RBP7.63□□□□□ -1.19
SMC1A-201ENST00000322213 ECEL1O95672 775 aa7.63□□□□□ -1.19
SMC1A-201ENST00000322213 ESRRAP11474 423 aaPredicted RBP7.63□□□□□ -1.19
SMC1A-201ENST00000322213 TPP2P29144 1249 aaPredicted RBP7.63□□□□□ -1.19
SMC1A-201ENST00000322213 TMED2Q15363 201 aa7.63□□□□□ -1.19
SMC1A-201ENST00000322213 AKAP4Q5JQC9 854 aa7.63□□□□□ -1.19
SMC1A-201ENST00000322213 C1orf146Q5VVC0 180 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms