RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 KIF1CO43896 1103 aaKnown RBP19.69■□□□□ 0.74
PRKCB-202ENST00000321728 TMOD1P28289 359 aa19.69■□□□□ 0.74
PRKCB-202ENST00000321728 ELF1P32519 619 aa19.69■□□□□ 0.74
PRKCB-202ENST00000321728 ARID5AQ03989 594 aa19.69■□□□□ 0.74
PRKCB-202ENST00000321728 RCSD1Q6JBY9 416 aa19.69■□□□□ 0.74
PRKCB-202ENST00000321728 DYMQ7RTS9 669 aa19.69■□□□□ 0.74
PRKCB-202ENST00000321728 PLCB1Q9NQ66 1216 aa19.69■□□□□ 0.74
PRKCB-202ENST00000321728 ODF2LQ9ULJ1 636 aa19.69■□□□□ 0.74
PRKCB-202ENST00000321728 SRRM3A6NNA2 597 aaPredicted RBP19.68■□□□□ 0.74
PRKCB-202ENST00000321728 BACH1O14867 736 aa19.68■□□□□ 0.74
PRKCB-202ENST00000321728 ATP2C2O75185 946 aa19.68■□□□□ 0.74
PRKCB-202ENST00000321728 CTNNA1P35221 906 aaKnown RBP19.68■□□□□ 0.74
PRKCB-202ENST00000321728 NAB2Q15742 525 aa19.68■□□□□ 0.74
PRKCB-202ENST00000321728 SFMBT2Q5VUG0 894 aa19.68■□□□□ 0.74
PRKCB-202ENST00000321728 TAF4BQ92750 862 aa19.68■□□□□ 0.74
PRKCB-202ENST00000321728 CALML4Q96GE6 196 aa19.68■□□□□ 0.74
PRKCB-202ENST00000321728 INPP4AQ96PE3 977 aaPredicted RBP19.68■□□□□ 0.74
PRKCB-202ENST00000321728 DLEC1Q9Y238 1755 aa19.68■□□□□ 0.74
PRKCB-202ENST00000321728 KCNQ4P56696 695 aa19.68■□□□□ 0.74
PRKCB-202ENST00000321728 MEI1Q5TIA1 1274 aa19.68■□□□□ 0.74
PRKCB-202ENST00000321728 C3orf67Q6ZVT6 689 aa19.68■□□□□ 0.74
PRKCB-202ENST00000321728 SV2BQ7L1I2 683 aa19.68■□□□□ 0.74
PRKCB-202ENST00000321728 PARP9Q8IXQ6 854 aa19.68■□□□□ 0.74
PRKCB-202ENST00000321728 CCDC24Q8N4L8 307 aa19.68■□□□□ 0.74
PRKCB-202ENST00000321728 PNMA1Q8ND90 353 aa19.68■□□□□ 0.74
PRKCB-202ENST00000321728 SCLT1Q96NL6 688 aa19.68■□□□□ 0.74
PRKCB-202ENST00000321728 NIP7Q9Y221 180 aaKnown RBP eCLIP19.68■□□□□ 0.74
PRKCB-202ENST00000321728 CICQ96RK0 1608 aaPredicted RBP19.67■□□□□ 0.74
PRKCB-202ENST00000321728 ERVV-1B6SEH8 477 aa19.67■□□□□ 0.74
PRKCB-202ENST00000321728 PDHBP11177 359 aa19.67■□□□□ 0.74
PRKCB-202ENST00000321728 ERVK-9P63128 1117 aa19.67■□□□□ 0.74
PRKCB-202ENST00000321728 KIAA0753Q2KHM9 967 aa19.67■□□□□ 0.74
PRKCB-202ENST00000321728 CYB5D1Q6P9G0 228 aa19.67■□□□□ 0.74
PRKCB-202ENST00000321728 USP38Q8NB14 1042 aa19.67■□□□□ 0.74
PRKCB-202ENST00000321728 BANK1Q8NDB2 785 aa19.67■□□□□ 0.74
PRKCB-202ENST00000321728 TBC1D5Q92609 795 aa19.67■□□□□ 0.74
PRKCB-202ENST00000321728 OSBPL7Q9BZF2 842 aa19.67■□□□□ 0.74
PRKCB-202ENST00000321728 HAUS2Q9NVX0 235 aa19.67■□□□□ 0.74
PRKCB-202ENST00000321728 ANKRD36CQ5JPF3 1778 aa19.67■□□□□ 0.74
PRKCB-202ENST00000321728 TAF1P21675 1872 aa19.67■□□□□ 0.74
PRKCB-202ENST00000321728 RBAK-RBAKDNI3L0D1 243 aa19.67■□□□□ 0.74
PRKCB-202ENST00000321728 SERPING1P05155 500 aa19.67■□□□□ 0.74
PRKCB-202ENST00000321728 KLRK1P26718 216 aa19.67■□□□□ 0.74
PRKCB-202ENST00000321728 QPCTQ16769 361 aa19.67■□□□□ 0.74
PRKCB-202ENST00000321728 LRIG3Q6UXM1 1119 aa19.67■□□□□ 0.74
PRKCB-202ENST00000321728 BICDL1Q6ZP65 573 aa19.67■□□□□ 0.74
PRKCB-202ENST00000321728 ZNF384Q8TF68 577 aa19.67■□□□□ 0.74
PRKCB-202ENST00000321728 ISCUQ9H1K1 167 aa19.67■□□□□ 0.74
PRKCB-202ENST00000321728 DCP1AQ9NPI6 582 aaPredicted RBP19.67■□□□□ 0.74
PRKCB-202ENST00000321728 SLAIN2Q9P270 581 aa19.67■□□□□ 0.74
PRKCB-202ENST00000321728 DNM1LO00429 736 aa19.66■□□□□ 0.74
PRKCB-202ENST00000321728 KCNK3O14649 394 aa19.66■□□□□ 0.74
PRKCB-202ENST00000321728 C21orf2O43822 256 aa19.66■□□□□ 0.74
PRKCB-202ENST00000321728 SPRED3Q2MJR0 410 aa19.66■□□□□ 0.74
PRKCB-202ENST00000321728 DDX42Q86XP3 938 aaKnown RBP eCLIP19.66■□□□□ 0.74
PRKCB-202ENST00000321728 FUKQ8N0W3 1084 aa19.66■□□□□ 0.74
PRKCB-202ENST00000321728 TRAPPC3O43617 180 aa19.66■□□□□ 0.74
PRKCB-202ENST00000321728 POLR2FP61218 127 aaKnown RBP19.66■□□□□ 0.74
PRKCB-202ENST00000321728 KCNMA1Q12791 1236 aa19.66■□□□□ 0.74
PRKCB-202ENST00000321728 COBLL1Q53SF7 1204 aa19.66■□□□□ 0.74
PRKCB-202ENST00000321728 FAM83BQ5T0W9 1011 aa19.66■□□□□ 0.74
PRKCB-202ENST00000321728 PROCA1Q8NCQ7 364 aaPredicted RBP19.66■□□□□ 0.74
PRKCB-202ENST00000321728 UBLCP1Q8WVY7 318 aaPredicted RBP19.66■□□□□ 0.74
PRKCB-202ENST00000321728 LRRC45Q96CN5 670 aa19.66■□□□□ 0.74
PRKCB-202ENST00000321728 MYH1P12882 1939 aa19.66■□□□□ 0.74
PRKCB-202ENST00000321728 MYMKA6NI61 221 aa19.65■□□□□ 0.74
PRKCB-202ENST00000321728 TLR2O60603 784 aa19.65■□□□□ 0.74
PRKCB-202ENST00000321728 TFAP4Q01664 338 aa19.65■□□□□ 0.74
PRKCB-202ENST00000321728 ZNF844Q08AG5 666 aa19.65■□□□□ 0.74
PRKCB-202ENST00000321728 LRRC41Q15345 812 aa19.65■□□□□ 0.74
PRKCB-202ENST00000321728 SEC16BQ96JE7 1060 aa19.65■□□□□ 0.74
PRKCB-202ENST00000321728 PACSIN1Q9BY11 444 aa19.65■□□□□ 0.74
PRKCB-202ENST00000321728 CRNKL1Q9BZJ0 848 aaKnown RBP19.65■□□□□ 0.74
PRKCB-202ENST00000321728 EDEM3Q9BZQ6 932 aa19.65■□□□□ 0.74
PRKCB-202ENST00000321728 VEZTQ9HBM0 779 aa19.65■□□□□ 0.74
PRKCB-202ENST00000321728 SLC12A6Q9UHW9 1150 aa19.65■□□□□ 0.74
PRKCB-202ENST00000321728 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.65■□□□□ 0.74
PRKCB-202ENST00000321728 PCDHGC5Q9Y5F6 944 aa19.65■□□□□ 0.74
PRKCB-202ENST00000321728 ABCB11O95342 1321 aa19.65■□□□□ 0.74
PRKCB-202ENST00000321728 SCP2P22307 547 aa19.65■□□□□ 0.74
PRKCB-202ENST00000321728 UAP1Q16222 522 aaPredicted RBP19.65■□□□□ 0.74
PRKCB-202ENST00000321728 KCTD19Q17RG1 926 aaPredicted RBP19.65■□□□□ 0.74
PRKCB-202ENST00000321728 ANKRD20A8PQ5CZ79 823 aa19.65■□□□□ 0.74
PRKCB-202ENST00000321728 GALNT17Q6IS24 598 aa19.65■□□□□ 0.74
PRKCB-202ENST00000321728 RUFY4Q6ZNE9 571 aa19.65■□□□□ 0.74
PRKCB-202ENST00000321728 CACNA2D3Q8IZS8 1091 aa19.65■□□□□ 0.74
PRKCB-202ENST00000321728 MMTAG2Q9BU76 263 aaKnown RBP19.65■□□□□ 0.74
PRKCB-202ENST00000321728 BARHL2Q9NY43 387 aa19.65■□□□□ 0.74
PRKCB-202ENST00000321728 CEP72Q9P209 647 aa19.65■□□□□ 0.74
PRKCB-202ENST00000321728 ITGB4P16144 1822 aa19.65■□□□□ 0.74
PRKCB-202ENST00000321728 STXBP3O00186 592 aa19.64■□□□□ 0.73
PRKCB-202ENST00000321728 LRRC63Q05C16 580 aa19.64■□□□□ 0.73
PRKCB-202ENST00000321728 RAPGEF1Q13905 1077 aa19.64■□□□□ 0.73
PRKCB-202ENST00000321728 RPS6KA1Q15418 735 aa19.64■□□□□ 0.73
PRKCB-202ENST00000321728 PTPROQ16827 1216 aa19.64■□□□□ 0.73
PRKCB-202ENST00000321728 WLSQ5T9L3 541 aa19.64■□□□□ 0.73
PRKCB-202ENST00000321728 TMED8Q6PL24 325 aaPredicted RBP19.64■□□□□ 0.73
PRKCB-202ENST00000321728 UNC13DQ70J99 1090 aa19.64■□□□□ 0.73
PRKCB-202ENST00000321728 GUF1Q8N442 669 aaKnown RBP19.64■□□□□ 0.73
PRKCB-202ENST00000321728 DAGLBQ8NCG7 672 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms