RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 OSTNP61366 133 aa18.03■□□□□ 0.48
CLIP4-201ENST00000320081 ZKSCAN8Q15776 578 aaPredicted RBP18.03■□□□□ 0.48
CLIP4-201ENST00000320081 TMEM60Q9H2L4 133 aa18.03■□□□□ 0.48
CLIP4-201ENST00000320081 PCDHA13Q9Y5I0 950 aa18.03■□□□□ 0.48
CLIP4-201ENST00000320081 ZBED4O75132 1171 aa18.03■□□□□ 0.48
CLIP4-201ENST00000320081 CERS3Q8IU89 383 aa18.03■□□□□ 0.48
CLIP4-201ENST00000320081 MAGOHBQ96A72 148 aaKnown RBP18.03■□□□□ 0.48
CLIP4-201ENST00000320081 ANO3Q9BYT9 981 aa18.03■□□□□ 0.48
CLIP4-201ENST00000320081 RPS6KA4O75676 772 aa18.03■□□□□ 0.48
CLIP4-201ENST00000320081 VPS37BQ9H9H4 285 aa18.03■□□□□ 0.48
CLIP4-201ENST00000320081 ADAM21Q9UKJ8 722 aa18.03■□□□□ 0.48
CLIP4-201ENST00000320081 STK38LQ9Y2H1 464 aa18.03■□□□□ 0.48
CLIP4-201ENST00000320081 NCAPD2Q15021 1401 aa18.02■□□□□ 0.48
CLIP4-201ENST00000320081 RGS16O15492 202 aaPredicted RBP18.02■□□□□ 0.48
CLIP4-201ENST00000320081 PDE6BP35913 854 aa18.02■□□□□ 0.48
CLIP4-201ENST00000320081 TERF2Q15554 542 aa18.02■□□□□ 0.48
CLIP4-201ENST00000320081 ENGASEQ8NFI3 743 aa18.02■□□□□ 0.48
CLIP4-201ENST00000320081 RIN2Q8WYP3 895 aaPredicted RBP18.02■□□□□ 0.48
CLIP4-201ENST00000320081 NAP1L3Q99457 506 aaPredicted RBP18.02■□□□□ 0.48
CLIP4-201ENST00000320081 CD163L1Q9NR16 1453 aa18.02■□□□□ 0.48
CLIP4-201ENST00000320081 STK4Q13043 487 aa18.02■□□□□ 0.48
CLIP4-201ENST00000320081 DENND2CQ68D51 928 aa18.02■□□□□ 0.48
CLIP4-201ENST00000320081 ZNF746Q6NUN9 644 aaPredicted RBP18.02■□□□□ 0.48
CLIP4-201ENST00000320081 PANX2Q96RD6 677 aa18.02■□□□□ 0.48
CLIP4-201ENST00000320081 NPHP3-ACAD11A0A0J9YXS1 232 aa18.02■□□□□ 0.47
CLIP4-201ENST00000320081 BBOX1O75936 387 aa18.02■□□□□ 0.47
CLIP4-201ENST00000320081 RAD9BQ6WBX8 426 aa18.02■□□□□ 0.47
CLIP4-201ENST00000320081 RASGRP2Q7LDG7 609 aa18.02■□□□□ 0.47
CLIP4-201ENST00000320081 TMOD4Q9NZQ9 345 aa18.02■□□□□ 0.47
CLIP4-201ENST00000320081 NCOA3Q9Y6Q9 1424 aa18.02■□□□□ 0.47
CLIP4-201ENST00000320081 CC2D1AQ6P1N0 951 aaPredicted RBP18.01■□□□□ 0.47
CLIP4-201ENST00000320081 ALKBH5Q6P6C2 394 aaKnown RBP18.01■□□□□ 0.47
CLIP4-201ENST00000320081 RUFY4Q6ZNE9 571 aa18.01■□□□□ 0.47
CLIP4-201ENST00000320081 TXNRD3Q86VQ6 643 aa18.01■□□□□ 0.47
CLIP4-201ENST00000320081 SLFN12Q8IYM2 578 aa18.01■□□□□ 0.47
CLIP4-201ENST00000320081 AK8Q96MA6 479 aa18.01■□□□□ 0.47
CLIP4-201ENST00000320081 NARFQ9UHQ1 456 aa18.01■□□□□ 0.47
CLIP4-201ENST00000320081 KLK7P49862 253 aa18.01■□□□□ 0.47
CLIP4-201ENST00000320081 NLGN1Q8N2Q7 840 aa18.01■□□□□ 0.47
CLIP4-201ENST00000320081 MAK16Q9BXY0 300 aaKnown RBP18.01■□□□□ 0.47
CLIP4-201ENST00000320081 TBK1Q9UHD2 729 aa18.01■□□□□ 0.47
CLIP4-201ENST00000320081 FAM184BQ9ULE4 1060 aa18.01■□□□□ 0.47
CLIP4-201ENST00000320081 CSF1RP07333 972 aa18.01■□□□□ 0.47
CLIP4-201ENST00000320081 POLD1P28340 1107 aa18.01■□□□□ 0.47
CLIP4-201ENST00000320081 NF2P35240 595 aa18.01■□□□□ 0.47
CLIP4-201ENST00000320081 ADCY8P40145 1251 aa18.01■□□□□ 0.47
CLIP4-201ENST00000320081 LIG4P49917 911 aa18.01■□□□□ 0.47
CLIP4-201ENST00000320081 CYP4F22Q6NT55 531 aa18.01■□□□□ 0.47
CLIP4-201ENST00000320081 APBB1IPQ7Z5R6 666 aaPredicted RBP18.01■□□□□ 0.47
CLIP4-201ENST00000320081 SFR1Q86XK3 245 aa18.01■□□□□ 0.47
CLIP4-201ENST00000320081 CTAGE3PQ8IX95 158 aa18.01■□□□□ 0.47
CLIP4-201ENST00000320081 ANKRD35Q8N283 1001 aa18.01■□□□□ 0.47
CLIP4-201ENST00000320081 RETREG2Q8NC44 543 aa18.01■□□□□ 0.47
CLIP4-201ENST00000320081 DEPTORQ8TB45 409 aa18.01■□□□□ 0.47
CLIP4-201ENST00000320081 HOOK2Q96ED9 719 aa18.01■□□□□ 0.47
CLIP4-201ENST00000320081 GOLPH3Q9H4A6 298 aa18.01■□□□□ 0.47
CLIP4-201ENST00000320081 LGALS16A8MUM7 142 aa18■□□□□ 0.47
CLIP4-201ENST00000320081 TFRCP02786 760 aaKnown RBP18■□□□□ 0.47
CLIP4-201ENST00000320081 IFT88Q13099 833 aa18■□□□□ 0.47
CLIP4-201ENST00000320081 ANKRD40Q6AI12 368 aa18■□□□□ 0.47
CLIP4-201ENST00000320081 SCYL2Q6P3W7 929 aa18■□□□□ 0.47
CLIP4-201ENST00000320081 CLEC4GQ6UXB4 293 aa18■□□□□ 0.47
CLIP4-201ENST00000320081 VSIG1Q86XK7 387 aa18■□□□□ 0.47
CLIP4-201ENST00000320081 UBE2TQ9NPD8 197 aaPredicted RBP18■□□□□ 0.47
CLIP4-201ENST00000320081 CD2APQ9Y5K6 639 aa18■□□□□ 0.47
CLIP4-201ENST00000320081 CDHR2Q9BYE9 1310 aa18■□□□□ 0.47
CLIP4-201ENST00000320081 GNA14O95837 355 aa18■□□□□ 0.47
CLIP4-201ENST00000320081 ATP1A1P05023 1023 aaKnown RBP18■□□□□ 0.47
CLIP4-201ENST00000320081 GPSM2P81274 684 aa18■□□□□ 0.47
CLIP4-201ENST00000320081 ZNF394Q53GI3 561 aa18■□□□□ 0.47
CLIP4-201ENST00000320081 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18■□□□□ 0.47
CLIP4-201ENST00000320081 ZNF211Q13398 564 aaPredicted RBP18■□□□□ 0.47
CLIP4-201ENST00000320081 TEKT3Q9BXF9 490 aa18■□□□□ 0.47
CLIP4-201ENST00000320081 NUCKS1Q9H1E3 243 aaKnown RBP18■□□□□ 0.47
CLIP4-201ENST00000320081 AFPP02771 609 aaKnown RBP17.99■□□□□ 0.47
CLIP4-201ENST00000320081 ARL6IP4Q66PJ3 421 aaKnown RBP17.99■□□□□ 0.47
CLIP4-201ENST00000320081 CASC4Q6P4E1 433 aa17.99■□□□□ 0.47
CLIP4-201ENST00000320081 RPGRIP1Q96KN7 1286 aa17.99■□□□□ 0.47
CLIP4-201ENST00000320081 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.99■□□□□ 0.47
CLIP4-201ENST00000320081 RGL1Q9NZL6 768 aa17.99■□□□□ 0.47
CLIP4-201ENST00000320081 C1orf167Q5SNV9 1468 aa17.99■□□□□ 0.47
CLIP4-201ENST00000320081 MAP2P11137 1827 aaKnown RBP17.99■□□□□ 0.47
CLIP4-201ENST00000320081 PIK3C2BO00750 1634 aa17.99■□□□□ 0.47
CLIP4-201ENST00000320081 PDCLQ13371 301 aa17.99■□□□□ 0.47
CLIP4-201ENST00000320081 MRPL11Q9Y3B7 192 aaKnown RBP17.99■□□□□ 0.47
CLIP4-201ENST00000320081 PALMO75781 387 aa17.99■□□□□ 0.47
CLIP4-201ENST00000320081 VSNL1P62760 191 aa17.99■□□□□ 0.47
CLIP4-201ENST00000320081 NAA25Q14CX7 972 aa17.99■□□□□ 0.47
CLIP4-201ENST00000320081 ALX1Q15699 326 aa17.99■□□□□ 0.47
CLIP4-201ENST00000320081 SYCE1Q8N0S2 351 aa17.99■□□□□ 0.47
CLIP4-201ENST00000320081 THOC1Q96FV9 657 aaKnown RBP17.99■□□□□ 0.47
CLIP4-201ENST00000320081 CCDC17Q96LX7 622 aa17.99■□□□□ 0.47
CLIP4-201ENST00000320081 EXOC7Q9UPT5 735 aa17.99■□□□□ 0.47
CLIP4-201ENST00000320081 HMGB2P26583 209 aaKnown RBP17.98■□□□□ 0.47
CLIP4-201ENST00000320081 SSTR3P32745 418 aaPredicted RBP17.98■□□□□ 0.47
CLIP4-201ENST00000320081 MYL7Q01449 175 aa17.98■□□□□ 0.47
CLIP4-201ENST00000320081 INTS8Q75QN2 995 aaKnown RBP17.98■□□□□ 0.47
CLIP4-201ENST00000320081 AZI2Q9H6S1 392 aa17.98■□□□□ 0.47
CLIP4-201ENST00000320081 TXNDC16Q9P2K2 825 aa17.98■□□□□ 0.47
CLIP4-201ENST00000320081 PI4KBQ9UBF8 816 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms