RNA–Protein interactions for RNA: ENST00000314355.6

CKS2-201, Transcript of CDC28 protein kinase regulatory subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2-201ENST00000314355 WNT8AQ9H1J5 351 aa14.61□□□□□ -0.07
CKS2-201ENST00000314355 TTYH1Q9H313 450 aaPredicted RBP14.61□□□□□ -0.07
CKS2-201ENST00000314355 GRXCR1A8MXD5 290 aa14.6□□□□□ -0.07
CKS2-201ENST00000314355 FIBPO43427 364 aa14.6□□□□□ -0.07
CKS2-201ENST00000314355 ATP2A2P16615 1042 aaKnown RBP14.6□□□□□ -0.07
CKS2-201ENST00000314355 KCNJ6P48051 423 aa14.6□□□□□ -0.07
CKS2-201ENST00000314355 DHX32Q7L7V1 743 aaKnown RBP14.6□□□□□ -0.07
CKS2-201ENST00000314355 CCDC82Q8N4S0 544 aa14.6□□□□□ -0.07
CKS2-201ENST00000314355 USP26Q9BXU7 913 aa14.6□□□□□ -0.07
CKS2-201ENST00000314355 RTEL1Q9NZ71 1219 aa14.6□□□□□ -0.07
CKS2-201ENST00000314355 HDAC6Q9UBN7 1215 aa14.6□□□□□ -0.07
CKS2-201ENST00000314355 GTF2IRD1Q9UHL9 959 aa14.6□□□□□ -0.07
CKS2-201ENST00000314355 NAP1L2Q9ULW6 460 aaPredicted RBP14.6□□□□□ -0.07
CKS2-201ENST00000314355 DNAH12Q6ZR08 3092 aa14.6□□□□□ -0.07
CKS2-201ENST00000314355 LCTP09848 1927 aa14.6□□□□□ -0.07
CKS2-201ENST00000314355 LRRC37A2A6NM11 1700 aa14.59□□□□□ -0.07
CKS2-201ENST00000314355 PIK3CDO00329 1044 aa14.59□□□□□ -0.07
CKS2-201ENST00000314355 SORBS3O60504 671 aa14.59□□□□□ -0.07
CKS2-201ENST00000314355 GNAT1P11488 350 aa14.59□□□□□ -0.07
CKS2-201ENST00000314355 SELPP16109 830 aa14.59□□□□□ -0.07
CKS2-201ENST00000314355 USP17L6PQ6QN14 398 aa14.59□□□□□ -0.07
CKS2-201ENST00000314355 MICU3Q86XE3 530 aa14.59□□□□□ -0.07
CKS2-201ENST00000314355 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.59□□□□□ -0.07
CKS2-201ENST00000314355 PHOSPHO2Q8TCD6 241 aa14.59□□□□□ -0.07
CKS2-201ENST00000314355 SLC9A7Q96T83 725 aa14.59□□□□□ -0.07
CKS2-201ENST00000314355 CXXC1Q9P0U4 656 aaPredicted RBP14.59□□□□□ -0.07
CKS2-201ENST00000314355 ZNF215Q9UL58 517 aaPredicted RBP14.59□□□□□ -0.07
CKS2-201ENST00000314355 CCDC196A0A1B0GTZ2 297 aa14.58□□□□□ -0.08
CKS2-201ENST00000314355 C17orf102A2RUQ5 167 aa14.58□□□□□ -0.08
CKS2-201ENST00000314355 H3BRB1 525 aa14.58□□□□□ -0.08
CKS2-201ENST00000314355 MAFGO15525 162 aa14.58□□□□□ -0.08
CKS2-201ENST00000314355 PLEKHA8P1O95397 391 aa14.58□□□□□ -0.08
CKS2-201ENST00000314355 RXRAP19793 462 aa14.58□□□□□ -0.08
CKS2-201ENST00000314355 UBA1P22314 1058 aaKnown RBP14.58□□□□□ -0.08
CKS2-201ENST00000314355 ICAM3P32942 547 aa14.58□□□□□ -0.08
CKS2-201ENST00000314355 PTK7Q13308 1070 aa14.58□□□□□ -0.08
CKS2-201ENST00000314355 GRIN2CQ14957 1233 aa14.58□□□□□ -0.08
CKS2-201ENST00000314355 HSDL1Q3SXM5 330 aa14.58□□□□□ -0.08
CKS2-201ENST00000314355 PCNX4Q63HM2 1172 aa14.58□□□□□ -0.08
CKS2-201ENST00000314355 GDF6Q6KF10 455 aaPredicted RBP14.58□□□□□ -0.08
CKS2-201ENST00000314355 HEATR3Q7Z4Q2 680 aa14.58□□□□□ -0.08
CKS2-201ENST00000314355 SGMS1Q86VZ5 419 aa14.58□□□□□ -0.08
CKS2-201ENST00000314355 SRBD1Q8N5C6 995 aaKnown RBP14.58□□□□□ -0.08
CKS2-201ENST00000314355 PPP1R13LQ8WUF5 828 aa14.58□□□□□ -0.08
CKS2-201ENST00000314355 KAT2BQ92831 832 aa14.58□□□□□ -0.08
CKS2-201ENST00000314355 ZFP91Q96JP5 570 aaPredicted RBP14.58□□□□□ -0.08
CKS2-201ENST00000314355 LRRC2Q9BYS8 371 aa14.58□□□□□ -0.08
CKS2-201ENST00000314355 TUT1Q9H6E5 874 aaKnown RBP14.58□□□□□ -0.08
CKS2-201ENST00000314355 PCDHA11Q9Y5I1 949 aa14.58□□□□□ -0.08
CKS2-201ENST00000314355 SZT2Q5T011 3432 aa14.57□□□□□ -0.08
CKS2-201ENST00000314355 BAZ2BQ9UIF8 2168 aaKnown RBP14.57□□□□□ -0.08
CKS2-201ENST00000314355 SPATA31C2B4DYI2 1134 aa14.57□□□□□ -0.08
CKS2-201ENST00000314355 ZBTB43O43298 467 aa14.57□□□□□ -0.08
CKS2-201ENST00000314355 EFCAB14O75071 495 aa14.57□□□□□ -0.08
CKS2-201ENST00000314355 RGS20O76081 388 aa14.57□□□□□ -0.08
CKS2-201ENST00000314355 BAIAP3O94812 1187 aa14.57□□□□□ -0.08
CKS2-201ENST00000314355 F2P00734 622 aa14.57□□□□□ -0.08
CKS2-201ENST00000314355 ZNF286BP0CG31 522 aa14.57□□□□□ -0.08
CKS2-201ENST00000314355 IGFBP4P22692 258 aa14.57□□□□□ -0.08
CKS2-201ENST00000314355 PBX2P40425 430 aa14.57□□□□□ -0.08
CKS2-201ENST00000314355 RTN1Q16799 776 aa14.57□□□□□ -0.08
CKS2-201ENST00000314355 SLC35G1Q2M3R5 365 aa14.57□□□□□ -0.08
CKS2-201ENST00000314355 TSGA10IPQ3SY00 556 aa14.57□□□□□ -0.08
CKS2-201ENST00000314355 PPP2R2DQ66LE6 453 aa14.57□□□□□ -0.08
CKS2-201ENST00000314355 METTL7BQ6UX53 244 aa14.57□□□□□ -0.08
CKS2-201ENST00000314355 LRRC8DQ7L1W4 858 aa14.57□□□□□ -0.08
CKS2-201ENST00000314355 CYFIP1Q7L576 1253 aa14.57□□□□□ -0.08
CKS2-201ENST00000314355 CMTR1Q8N1G2 835 aaKnown RBP14.57□□□□□ -0.08
CKS2-201ENST00000314355 TNPO1Q92973 898 aaKnown RBP14.57□□□□□ -0.08
CKS2-201ENST00000314355 INPP4AQ96PE3 977 aaPredicted RBP14.57□□□□□ -0.08
CKS2-201ENST00000314355 SENP7Q9BQF6 1050 aa14.57□□□□□ -0.08
CKS2-201ENST00000314355 ZBED2Q9BTP6 218 aa14.57□□□□□ -0.08
CKS2-201ENST00000314355 GLT8D2Q9H1C3 349 aa14.57□□□□□ -0.08
CKS2-201ENST00000314355 TSPYL2Q9H2G4 693 aaPredicted RBP14.57□□□□□ -0.08
CKS2-201ENST00000314355 NKX2-4Q9H2Z4 354 aa14.57□□□□□ -0.08
CKS2-201ENST00000314355 LAMA3Q16787 3333 aa14.56□□□□□ -0.08
CKS2-201ENST00000314355 hCG_1984214I3L0E3 225 aa14.56□□□□□ -0.08
CKS2-201ENST00000314355 HAS3O00219 553 aa14.56□□□□□ -0.08
CKS2-201ENST00000314355 REC8O95072 547 aa14.56□□□□□ -0.08
CKS2-201ENST00000314355 PSMA5P28066 241 aa14.56□□□□□ -0.08
CKS2-201ENST00000314355 SP2Q02086 613 aa14.56□□□□□ -0.08
CKS2-201ENST00000314355 IKBKEQ14164 716 aa14.56□□□□□ -0.08
CKS2-201ENST00000314355 TMTC3Q6ZXV5 915 aa14.56□□□□□ -0.08
CKS2-201ENST00000314355 RAB11FIP4Q86YS3 637 aa14.56□□□□□ -0.08
CKS2-201ENST00000314355 TEX2Q8IWB9 1127 aa14.56□□□□□ -0.08
CKS2-201ENST00000314355 ZNF713Q8N859 430 aaPredicted RBP14.56□□□□□ -0.08
CKS2-201ENST00000314355 IL31RAQ8NI17 732 aa14.56□□□□□ -0.08
CKS2-201ENST00000314355 ATP6V0A1Q93050 837 aa14.56□□□□□ -0.08
CKS2-201ENST00000314355 PRDM12Q9H4Q4 367 aa14.56□□□□□ -0.08
CKS2-201ENST00000314355 SCN10AQ9Y5Y9 1956 aa14.55□□□□□ -0.08
CKS2-201ENST00000314355 GOLGA8AA7E2F4 631 aa14.55□□□□□ -0.08
CKS2-201ENST00000314355 GOLGA8BA8MQT2 603 aa14.55□□□□□ -0.08
CKS2-201ENST00000314355 MEIS2O14770 477 aa14.55□□□□□ -0.08
CKS2-201ENST00000314355 FOSP01100 380 aaPredicted RBP14.55□□□□□ -0.08
CKS2-201ENST00000314355 CKBP12277 381 aa14.55□□□□□ -0.08
CKS2-201ENST00000314355 NAPAP54920 295 aa14.55□□□□□ -0.08
CKS2-201ENST00000314355 MRPS9P82933 396 aaKnown RBP14.55□□□□□ -0.08
CKS2-201ENST00000314355 AKAP17AQ02040 695 aaKnown RBP14.55□□□□□ -0.08
CKS2-201ENST00000314355 UTP14CQ5TAP6 766 aaKnown RBP14.55□□□□□ -0.08
CKS2-201ENST00000314355 CNKSR3Q6P9H4 555 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms