RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 TGFB3P10600 412 aa16.8■□□□□ 0.28
PPP1CA-201ENST00000312989 CYP2C9P11712 490 aa16.8■□□□□ 0.28
PPP1CA-201ENST00000312989 ITGB5P18084 799 aa16.8■□□□□ 0.28
PPP1CA-201ENST00000312989 CLK2P49760 499 aaKnown RBP16.8■□□□□ 0.28
PPP1CA-201ENST00000312989 LAMC2Q13753 1193 aa16.8■□□□□ 0.28
PPP1CA-201ENST00000312989 HIC1Q14526 733 aa16.8■□□□□ 0.28
PPP1CA-201ENST00000312989 PKN1Q16512 942 aa16.8■□□□□ 0.28
PPP1CA-201ENST00000312989 SYNE3Q6ZMZ3 975 aa16.8■□□□□ 0.28
PPP1CA-201ENST00000312989 HEATR3Q7Z4Q2 680 aa16.8■□□□□ 0.28
PPP1CA-201ENST00000312989 SMARCC2Q8TAQ2 1214 aa16.8■□□□□ 0.28
PPP1CA-201ENST00000312989 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.8■□□□□ 0.282e-6■□□□□ 8.3
PPP1CA-201ENST00000312989 HIPK3Q9H422 1215 aa16.8■□□□□ 0.28
PPP1CA-201ENST00000312989 BARHL2Q9NY43 387 aa16.8■□□□□ 0.28
PPP1CA-201ENST00000312989 RTEL1Q9NZ71 1219 aa16.8■□□□□ 0.28
PPP1CA-201ENST00000312989 V9GY48 417 aaPredicted RBP16.8■□□□□ 0.28
PPP1CA-201ENST00000312989 RBAK-RBAKDNI3L0D1 243 aa16.79■□□□□ 0.28
PPP1CA-201ENST00000312989 SORBS3O60504 671 aa16.79■□□□□ 0.28
PPP1CA-201ENST00000312989 STAM2O75886 525 aa16.79■□□□□ 0.28
PPP1CA-201ENST00000312989 PDIA3P30101 505 aaKnown RBP16.79■□□□□ 0.28
PPP1CA-201ENST00000312989 METAP2P50579 478 aaKnown RBP eCLIP16.79■□□□□ 0.28
PPP1CA-201ENST00000312989 PTPN11Q06124 597 aaPredicted RBP16.79■□□□□ 0.28
PPP1CA-201ENST00000312989 TMEM240Q5SV17 173 aa16.79■□□□□ 0.28
PPP1CA-201ENST00000312989 PPP1R18Q6NYC8 613 aa16.79■□□□□ 0.28
PPP1CA-201ENST00000312989 XRRA1Q6P2D8 792 aa16.79■□□□□ 0.28
PPP1CA-201ENST00000312989 KCNV1Q6PIU1 500 aa16.79■□□□□ 0.28
PPP1CA-201ENST00000312989 RUFY3Q7L099 469 aa16.79■□□□□ 0.28
PPP1CA-201ENST00000312989 Q7L0L9 218 aa16.79■□□□□ 0.28
PPP1CA-201ENST00000312989 IL17RAQ96F46 866 aa16.79■□□□□ 0.28
PPP1CA-201ENST00000312989 C16orf70Q9BSU1 422 aa16.79■□□□□ 0.28
PPP1CA-201ENST00000312989 TM6SF1Q9BZW5 370 aa16.79■□□□□ 0.28
PPP1CA-201ENST00000312989 UBIAD1Q9Y5Z9 338 aa16.79■□□□□ 0.28
PPP1CA-201ENST00000312989 CENPBP07199 599 aaPredicted RBP16.78■□□□□ 0.28
PPP1CA-201ENST00000312989 ZNF286BP0CG31 522 aa16.78■□□□□ 0.28
PPP1CA-201ENST00000312989 DGKDQ16760 1214 aa16.78■□□□□ 0.28
PPP1CA-201ENST00000312989 BRDTQ58F21 947 aaPredicted RBP16.78■□□□□ 0.28
PPP1CA-201ENST00000312989 DHX37Q8IY37 1157 aaKnown RBP16.78■□□□□ 0.28
PPP1CA-201ENST00000312989 DHX38Q92620 1227 aaKnown RBP16.78■□□□□ 0.28
PPP1CA-201ENST00000312989 RIC8AQ9NPQ8 531 aa16.78■□□□□ 0.28
PPP1CA-201ENST00000312989 PCDHA6Q9UN73 950 aa16.78■□□□□ 0.28
PPP1CA-201ENST00000312989 PCDHA8Q9Y5H6 950 aa16.78■□□□□ 0.28
PPP1CA-201ENST00000312989 CHD9Q3L8U1 2897 aa16.78■□□□□ 0.28
PPP1CA-201ENST00000312989 FIBPO43427 364 aa16.77■□□□□ 0.28
PPP1CA-201ENST00000312989 ATP9AO75110 1047 aa16.77■□□□□ 0.28
PPP1CA-201ENST00000312989 ACRP10323 421 aa16.77■□□□□ 0.28
PPP1CA-201ENST00000312989 KCNA2P16389 499 aa16.77■□□□□ 0.28
PPP1CA-201ENST00000312989 PSMA5P28066 241 aa16.77■□□□□ 0.28
PPP1CA-201ENST00000312989 HOXC8P31273 242 aa16.77■□□□□ 0.28
PPP1CA-201ENST00000312989 GPNMBQ14956 572 aa16.77■□□□□ 0.28
PPP1CA-201ENST00000312989 PFKFB3Q16875 520 aaPredicted RBP16.77■□□□□ 0.28
PPP1CA-201ENST00000312989 FAM109BQ6ICB4 259 aaPredicted RBP16.77■□□□□ 0.28
PPP1CA-201ENST00000312989 GDF6Q6KF10 455 aaPredicted RBP16.77■□□□□ 0.28
PPP1CA-201ENST00000312989 CRYGNQ8WXF5 182 aa16.77■□□□□ 0.28
PPP1CA-201ENST00000312989 CUL5Q93034 780 aa16.77■□□□□ 0.28
PPP1CA-201ENST00000312989 SPATA33Q96N06 139 aa16.77■□□□□ 0.28
PPP1CA-201ENST00000312989 UPF3BQ9BZI7 483 aaKnown RBP16.77■□□□□ 0.28
PPP1CA-201ENST00000312989 GTF2IRD1Q9UHL9 959 aa16.77■□□□□ 0.28
PPP1CA-201ENST00000312989 hCG_1984214I3L0E3 225 aa16.77■□□□□ 0.27
PPP1CA-201ENST00000312989 PPFIA4O75335 1185 aa16.77■□□□□ 0.27
PPP1CA-201ENST00000312989 PSEN2P49810 448 aa16.77■□□□□ 0.27
PPP1CA-201ENST00000312989 NAPAP54920 295 aa16.77■□□□□ 0.27
PPP1CA-201ENST00000312989 CCL23P55773 120 aa16.77■□□□□ 0.27
PPP1CA-201ENST00000312989 METTL7BQ6UX53 244 aa16.77■□□□□ 0.27
PPP1CA-201ENST00000312989 TEX2Q8IWB9 1127 aa16.77■□□□□ 0.27
PPP1CA-201ENST00000312989 ZNF713Q8N859 430 aaPredicted RBP16.77■□□□□ 0.27
PPP1CA-201ENST00000312989 WNT8BQ93098 351 aa16.77■□□□□ 0.27
PPP1CA-201ENST00000312989 PGBD1Q96JS3 809 aa16.77■□□□□ 0.27
PPP1CA-201ENST00000312989 GPR20Q99678 358 aa16.77■□□□□ 0.27
PPP1CA-201ENST00000312989 SENP7Q9BQF6 1050 aa16.77■□□□□ 0.27
PPP1CA-201ENST00000312989 NCOA5Q9HCD5 579 aaKnown RBP16.77■□□□□ 0.27
PPP1CA-201ENST00000312989 PRPF3O43395 683 aaKnown RBP16.76■□□□□ 0.27
PPP1CA-201ENST00000312989 RBL2Q08999 1139 aa16.76■□□□□ 0.27
PPP1CA-201ENST00000312989 PPIGQ13427 754 aaKnown RBP eCLIP16.76■□□□□ 0.27
PPP1CA-201ENST00000312989 MFSD10Q14728 455 aa16.76■□□□□ 0.27
PPP1CA-201ENST00000312989 TRIM71Q2Q1W2 868 aaKnown RBP16.76■□□□□ 0.27
PPP1CA-201ENST00000312989 GNPTABQ3T906 1256 aa16.76■□□□□ 0.27
PPP1CA-201ENST00000312989 TRAF7Q6Q0C0 670 aa16.76■□□□□ 0.27
PPP1CA-201ENST00000312989 ZNF365Q70YC5 407 aa16.76■□□□□ 0.27
PPP1CA-201ENST00000312989 TMEM199Q8N511 208 aa16.76■□□□□ 0.27
PPP1CA-201ENST00000312989 PHKBQ93100 1093 aa16.76■□□□□ 0.27
PPP1CA-201ENST00000312989 GPRASP2Q96D09 838 aa16.76■□□□□ 0.27
PPP1CA-201ENST00000312989 SCLYQ96I15 445 aa16.76■□□□□ 0.27
PPP1CA-201ENST00000312989 RNPC3Q96LT9 517 aaKnown RBP16.76■□□□□ 0.27
PPP1CA-201ENST00000312989 IL23AQ9NPF7 189 aa16.76■□□□□ 0.27
PPP1CA-201ENST00000312989 TMEM260Q9NX78 707 aa16.76■□□□□ 0.27
PPP1CA-201ENST00000312989 CXXC1Q9P0U4 656 aaPredicted RBP16.76■□□□□ 0.27
PPP1CA-201ENST00000312989 HDAC6Q9UBN7 1215 aa16.76■□□□□ 0.27
PPP1CA-201ENST00000312989 ESYT2A0FGR8 921 aa16.75■□□□□ 0.27
PPP1CA-201ENST00000312989 PITPNM1O00562 1244 aa16.75■□□□□ 0.27
PPP1CA-201ENST00000312989 EDIL3O43854 480 aa16.75■□□□□ 0.27
PPP1CA-201ENST00000312989 PPFIA3O75145 1194 aa16.75■□□□□ 0.27
PPP1CA-201ENST00000312989 SEC24BO95487 1268 aa16.75■□□□□ 0.27
PPP1CA-201ENST00000312989 LGALS2P05162 132 aa16.75■□□□□ 0.27
PPP1CA-201ENST00000312989 SUPT20HL2P0C7V6 817 aa16.75■□□□□ 0.27
PPP1CA-201ENST00000312989 SCG2P13521 617 aa16.75■□□□□ 0.27
PPP1CA-201ENST00000312989 IFNAR1P17181 557 aa16.75■□□□□ 0.27
PPP1CA-201ENST00000312989 SMAD3P84022 425 aaKnown RBP16.75■□□□□ 0.27
PPP1CA-201ENST00000312989 KIAA0753Q2KHM9 967 aa16.75■□□□□ 0.27
PPP1CA-201ENST00000312989 FAM47CQ5HY64 1035 aa16.75■□□□□ 0.27
PPP1CA-201ENST00000312989 CYFIP1Q7L576 1253 aa16.75■□□□□ 0.27
PPP1CA-201ENST00000312989 CYP2W1Q8TAV3 490 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms