RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 EIF5BO60841 1220 aaKnown RBP6□□□□□ -1.45
CKS1B-201ENST00000308987 FRAT2O75474 233 aaPredicted RBP6□□□□□ -1.45
CKS1B-201ENST00000308987 GPSM2P81274 684 aa6□□□□□ -1.45
CKS1B-201ENST00000308987 KIF23Q02241 960 aaPredicted RBP6□□□□□ -1.45
CKS1B-201ENST00000308987 AIMP1Q12904 312 aaKnown RBP6□□□□□ -1.45
CKS1B-201ENST00000308987 MVPQ14764 893 aaKnown RBP6□□□□□ -1.45
CKS1B-201ENST00000308987 NKPD1Q17RQ9 610 aa6□□□□□ -1.45
CKS1B-201ENST00000308987 KIAA0319Q5VV43 1072 aa6□□□□□ -1.45
CKS1B-201ENST00000308987 CDC37L1Q7L3B6 337 aa6□□□□□ -1.45
CKS1B-201ENST00000308987 SKAP1Q86WV1 359 aa6□□□□□ -1.45
CKS1B-201ENST00000308987 FAM43AQ8N2R8 423 aa6□□□□□ -1.45
CKS1B-201ENST00000308987 PANK1Q8TE04 598 aa6□□□□□ -1.45
CKS1B-201ENST00000308987 ISCA1Q9BUE6 129 aa6□□□□□ -1.45
CKS1B-201ENST00000308987 BCL2L13Q9BXK5 485 aa6□□□□□ -1.45
CKS1B-201ENST00000308987 CHMP4BQ9H444 224 aaKnown RBP6□□□□□ -1.45
CKS1B-201ENST00000308987 ANTXR1Q9H6X2 564 aa6□□□□□ -1.45
CKS1B-201ENST00000308987 C19orf73Q9NVV2 129 aa6□□□□□ -1.45
CKS1B-201ENST00000308987 TSPYL4Q9UJ04 414 aa6□□□□□ -1.45
CKS1B-201ENST00000308987 A0A1B0GUL6 1792 aa6□□□□□ -1.45
CKS1B-201ENST00000308987 ECM29Q5VYK3 1845 aa5.99□□□□□ -1.45
CKS1B-201ENST00000308987 LAMA3Q16787 3333 aa5.99□□□□□ -1.45
CKS1B-201ENST00000308987 PAPPA2Q9BXP8 1791 aa5.99□□□□□ -1.45
CKS1B-201ENST00000308987 IGF2BP3O00425 579 aaKnown RBP eCLIP5.99□□□□□ -1.45
CKS1B-201ENST00000308987 CA12O43570 354 aa5.99□□□□□ -1.45
CKS1B-201ENST00000308987 GADD45BO75293 160 aaPredicted RBP5.99□□□□□ -1.45
CKS1B-201ENST00000308987 NPR3P17342 541 aa5.99□□□□□ -1.45
CKS1B-201ENST00000308987 TMPOP42166 694 aaKnown RBP5.99□□□□□ -1.45
CKS1B-201ENST00000308987 SOX10P56693 466 aa5.99□□□□□ -1.45
CKS1B-201ENST00000308987 RIPK4P57078 832 aa5.99□□□□□ -1.45
CKS1B-201ENST00000308987 NOGQ13253 232 aa5.99□□□□□ -1.45
CKS1B-201ENST00000308987 TNIP1Q15025 636 aa5.99□□□□□ -1.45
CKS1B-201ENST00000308987 SF3B3Q15393 1217 aaKnown RBP5.99□□□□□ -1.45
CKS1B-201ENST00000308987 RGMBQ6NW40 437 aa5.99□□□□□ -1.45
CKS1B-201ENST00000308987 DDX46Q7L014 1031 aaKnown RBP5.99□□□□□ -1.45
CKS1B-201ENST00000308987 KRT26Q7Z3Y9 468 aa5.99□□□□□ -1.45
CKS1B-201ENST00000308987 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.99□□□□□ -1.45
CKS1B-201ENST00000308987 GJD3Q8N144 294 aa5.99□□□□□ -1.45
CKS1B-201ENST00000308987 SUPT20HQ8NEM7 779 aa5.99□□□□□ -1.45
CKS1B-201ENST00000308987 DPF2Q92785 391 aa5.99□□□□□ -1.45
CKS1B-201ENST00000308987 ISL2Q96A47 359 aa5.99□□□□□ -1.45
CKS1B-201ENST00000308987 FAM89AQ96GI7 184 aa5.99□□□□□ -1.45
CKS1B-201ENST00000308987 CSRNP1Q96S65 589 aa5.99□□□□□ -1.45
CKS1B-201ENST00000308987 RNF186Q9NXI6 227 aa5.99□□□□□ -1.45
CKS1B-201ENST00000308987 CHPF2Q9P2E5 772 aa5.99□□□□□ -1.45
CKS1B-201ENST00000308987 GTF2IRD1Q9UHL9 959 aa5.99□□□□□ -1.45
CKS1B-201ENST00000308987 TRMT112Q9UI30 125 aaKnown RBP5.99□□□□□ -1.45
CKS1B-201ENST00000308987 ISY1Q9ULR0 285 aaKnown RBP5.99□□□□□ -1.45
CKS1B-201ENST00000308987 DDX19BQ9UMR2 479 aa5.99□□□□□ -1.45
CKS1B-201ENST00000308987 SCAF8Q9UPN6 1271 aaKnown RBP5.99□□□□□ -1.45
CKS1B-201ENST00000308987 SMG5Q9UPR3 1016 aaKnown RBP5.99□□□□□ -1.45
CKS1B-201ENST00000308987 TRIOBPQ9H2D6 2365 aa5.99□□□□□ -1.45
CKS1B-201ENST00000308987 SH3TC1Q8TE82 1336 aa5.99□□□□□ -1.45
CKS1B-201ENST00000308987 KIF16BQ96L93 1317 aa5.99□□□□□ -1.45
CKS1B-201ENST00000308987 PITPNM2Q9BZ72 1349 aa5.99□□□□□ -1.45
CKS1B-201ENST00000308987 LAMA2P24043 3122 aaKnown RBP5.98□□□□□ -1.45
CKS1B-201ENST00000308987 H7C1D1 291 aa5.98□□□□□ -1.45
CKS1B-201ENST00000308987 CHL1O00533 1208 aa5.98□□□□□ -1.45
CKS1B-201ENST00000308987 IPO8O15397 1037 aaKnown RBP5.98□□□□□ -1.45
CKS1B-201ENST00000308987 ECE2O60344 883 aa5.98□□□□□ -1.45
CKS1B-201ENST00000308987 VIL1P09327 827 aaKnown RBP5.98□□□□□ -1.45
CKS1B-201ENST00000308987 MED14OSP0DP75 135 aa5.98□□□□□ -1.45
CKS1B-201ENST00000308987 PTMSP20962 102 aa5.98□□□□□ -1.45
CKS1B-201ENST00000308987 GDNFP39905 211 aa5.98□□□□□ -1.45
CKS1B-201ENST00000308987 ALDH1L2Q3SY69 923 aa5.98□□□□□ -1.45
CKS1B-201ENST00000308987 MOB2Q70IA6 237 aa5.98□□□□□ -1.45
CKS1B-201ENST00000308987 SMC5Q8IY18 1101 aa5.98□□□□□ -1.45
CKS1B-201ENST00000308987 TBC1D16Q8TBP0 767 aa5.98□□□□□ -1.45
CKS1B-201ENST00000308987 GMLQ99445 158 aa5.98□□□□□ -1.45
CKS1B-201ENST00000308987 CARS2Q9HA77 564 aaKnown RBP5.98□□□□□ -1.45
CKS1B-201ENST00000308987 GBA2Q9HCG7 927 aaPredicted RBP5.98□□□□□ -1.45
CKS1B-201ENST00000308987 NPHS2Q9NP85 383 aa5.98□□□□□ -1.45
CKS1B-201ENST00000308987 DCP1AQ9NPI6 582 aaPredicted RBP5.98□□□□□ -1.45
CKS1B-201ENST00000308987 CARNS1A5YM72 827 aa5.97□□□□□ -1.45
CKS1B-201ENST00000308987 TCAF2A6NFQ2 919 aa5.97□□□□□ -1.45
CKS1B-201ENST00000308987 ETV2O00321 342 aaPredicted RBP5.97□□□□□ -1.45
CKS1B-201ENST00000308987 NUAK1O60285 661 aa5.97□□□□□ -1.45
CKS1B-201ENST00000308987 RLBP1P12271 317 aa5.97□□□□□ -1.45
CKS1B-201ENST00000308987 HSP90AB3PQ58FF7 597 aa5.97□□□□□ -1.45
CKS1B-201ENST00000308987 RASAL3Q86YV0 1011 aa5.97□□□□□ -1.45
CKS1B-201ENST00000308987 GLYCTKQ8IVS8 523 aa5.97□□□□□ -1.45
CKS1B-201ENST00000308987 FTSJ3Q8IY81 847 aaKnown RBP5.97□□□□□ -1.45
CKS1B-201ENST00000308987 JARID2Q92833 1246 aaPredicted RBP5.97□□□□□ -1.45
CKS1B-201ENST00000308987 CDCA5Q96FF9 252 aa5.97□□□□□ -1.45
CKS1B-201ENST00000308987 R3HDMLQ9H3Y0 253 aa5.97□□□□□ -1.45
CKS1B-201ENST00000308987 KRT82Q9NSB4 513 aa5.97□□□□□ -1.45
CKS1B-201ENST00000308987 BABAM1Q9NWV8 329 aa5.97□□□□□ -1.45
CKS1B-201ENST00000308987 SAGE1Q9NXZ1 904 aa5.97□□□□□ -1.45
CKS1B-201ENST00000308987 GGA3Q9NZ52 723 aa5.97□□□□□ -1.45
CKS1B-201ENST00000308987 CHMP5Q9NZZ3 219 aa5.97□□□□□ -1.45
CKS1B-201ENST00000308987 RBBP6Q7Z6E9 1792 aaKnown RBP5.97□□□□□ -1.45
CKS1B-201ENST00000308987 ZNF609O15014 1411 aa5.97□□□□□ -1.45
CKS1B-201ENST00000308987 CACNA1FO60840 1977 aa5.97□□□□□ -1.45
CKS1B-201ENST00000308987 OTOFQ9HC10 1997 aa5.97□□□□□ -1.45
CKS1B-201ENST00000308987 H3BRB1 525 aa5.96□□□□□ -1.46
CKS1B-201ENST00000308987 IRS4O14654 1257 aaPredicted RBP5.96□□□□□ -1.46
CKS1B-201ENST00000308987 GSTP1P09211 210 aaKnown RBP5.96□□□□□ -1.46
CKS1B-201ENST00000308987 RPS12P25398 132 aaKnown RBP5.96□□□□□ -1.46
CKS1B-201ENST00000308987 ZNF280AP59817 542 aaPredicted RBP5.96□□□□□ -1.46
CKS1B-201ENST00000308987 RPS8P62241 208 aaKnown RBP5.96□□□□□ -1.46
CKS1B-201ENST00000308987 PTPN12Q05209 780 aaKnown RBP5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms