RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 EHBP1Q8NDI1 1231 aa10.21□□□□□ -0.78
PTPRE-202ENST00000306042 MCPH1Q8NEM0 835 aa10.21□□□□□ -0.78
PTPRE-202ENST00000306042 ERO1AQ96HE7 468 aa10.21□□□□□ -0.78
PTPRE-202ENST00000306042 MED10Q9BTT4 135 aa10.21□□□□□ -0.78
PTPRE-202ENST00000306042 PDGFDQ9GZP0 370 aaPredicted RBP10.21□□□□□ -0.78
PTPRE-202ENST00000306042 FBXO28Q9NVF7 368 aa10.21□□□□□ -0.78
PTPRE-202ENST00000306042 PARP4Q9UKK3 1724 aaKnown RBP10.21□□□□□ -0.78
PTPRE-202ENST00000306042 DENND3A2RUS2 1198 aa10.21□□□□□ -0.78
PTPRE-202ENST00000306042 K7ERI5 159 aa10.21□□□□□ -0.78
PTPRE-202ENST00000306042 GGPS1O95749 300 aa10.21□□□□□ -0.78
PTPRE-202ENST00000306042 GH1P01241 217 aa10.21□□□□□ -0.78
PTPRE-202ENST00000306042 TNFAIP3P21580 790 aa10.21□□□□□ -0.78
PTPRE-202ENST00000306042 CDC25AP30304 524 aa10.21□□□□□ -0.78
PTPRE-202ENST00000306042 NOGQ13253 232 aa10.21□□□□□ -0.78
PTPRE-202ENST00000306042 PTPN14Q15678 1187 aa10.21□□□□□ -0.78
PTPRE-202ENST00000306042 CEP55Q53EZ4 464 aa10.21□□□□□ -0.78
PTPRE-202ENST00000306042 ACCSQ96QU6 501 aa10.21□□□□□ -0.78
PTPRE-202ENST00000306042 BHMT2Q9H2M3 363 aa10.21□□□□□ -0.78
PTPRE-202ENST00000306042 MROH8Q9H579 483 aa10.21□□□□□ -0.78
PTPRE-202ENST00000306042 IFNKQ9P0W0 207 aa10.21□□□□□ -0.78
PTPRE-202ENST00000306042 GABBR1Q9UBS5 961 aa10.21□□□□□ -0.78
PTPRE-202ENST00000306042 SLC9A2Q9UBY0 812 aa10.21□□□□□ -0.78
PTPRE-202ENST00000306042 ARMCX3Q9UH62 379 aaPredicted RBP10.21□□□□□ -0.78
PTPRE-202ENST00000306042 KRT9P35527 623 aa10.2□□□□□ -0.78
PTPRE-202ENST00000306042 PPATQ06203 517 aa10.2□□□□□ -0.78
PTPRE-202ENST00000306042 ARL6IP4Q66PJ3 421 aaKnown RBP10.2□□□□□ -0.78
PTPRE-202ENST00000306042 RNF180Q86T96 592 aa10.2□□□□□ -0.78
PTPRE-202ENST00000306042 HOOK3Q86VS8 718 aa10.2□□□□□ -0.78
PTPRE-202ENST00000306042 SRBD1Q8N5C6 995 aaKnown RBP10.2□□□□□ -0.78
PTPRE-202ENST00000306042 SCFD2Q8WU76 684 aa10.2□□□□□ -0.78
PTPRE-202ENST00000306042 KATNAL1Q9BW62 490 aa10.2□□□□□ -0.78
PTPRE-202ENST00000306042 ATP6V0A4Q9HBG4 840 aa10.2□□□□□ -0.78
PTPRE-202ENST00000306042 ANAPC4Q9UJX5 808 aa10.2□□□□□ -0.78
PTPRE-202ENST00000306042 PCDHB6Q9Y5E3 794 aa10.2□□□□□ -0.78
PTPRE-202ENST00000306042 GSTTP1A0A1W2PQM5 241 aa10.2□□□□□ -0.78
PTPRE-202ENST00000306042 NLRP12P59046 1061 aa10.2□□□□□ -0.78
PTPRE-202ENST00000306042 GNASQ5JWF2 1037 aa10.2□□□□□ -0.78
PTPRE-202ENST00000306042 KRBA2Q6ZNG9 492 aa10.2□□□□□ -0.78
PTPRE-202ENST00000306042 TRPM4Q8TD43 1214 aa10.2□□□□□ -0.78
PTPRE-202ENST00000306042 FAM163AQ96GL9 167 aaPredicted RBP10.2□□□□□ -0.78
PTPRE-202ENST00000306042 AGBL1Q96MI9 1066 aa10.2□□□□□ -0.78
PTPRE-202ENST00000306042 SRRTQ9BXP5 876 aaKnown RBP10.2□□□□□ -0.78
PTPRE-202ENST00000306042 PARVGQ9HBI0 331 aa10.2□□□□□ -0.78
PTPRE-202ENST00000306042 RPN1P04843 607 aaKnown RBP10.2□□□□□ -0.78
PTPRE-202ENST00000306042 PLA2G4BP0C869 781 aa10.2□□□□□ -0.78
PTPRE-202ENST00000306042 USP11P51784 963 aa10.2□□□□□ -0.78
PTPRE-202ENST00000306042 CACNB1Q02641 598 aaPredicted RBP10.2□□□□□ -0.78
PTPRE-202ENST00000306042 SEPT7Q16181 437 aaKnown RBP10.2□□□□□ -0.78
PTPRE-202ENST00000306042 TSGA10IPQ3SY00 556 aa10.2□□□□□ -0.78
PTPRE-202ENST00000306042 RGMBQ6NW40 437 aa10.2□□□□□ -0.78
PTPRE-202ENST00000306042 STOX1Q6ZVD7 989 aa10.2□□□□□ -0.78
PTPRE-202ENST00000306042 BANK1Q8NDB2 785 aa10.2□□□□□ -0.78
PTPRE-202ENST00000306042 LMBR1Q8WVP7 490 aa10.2□□□□□ -0.78
PTPRE-202ENST00000306042 PSPC1Q8WXF1 523 aaKnown RBP10.2□□□□□ -0.78
PTPRE-202ENST00000306042 CCDC94Q9BW85 323 aaPredicted RBP10.2□□□□□ -0.78
PTPRE-202ENST00000306042 JPH1Q9HDC5 661 aaPredicted RBP10.2□□□□□ -0.78
PTPRE-202ENST00000306042 NFE2L3Q9Y4A8 694 aa10.2□□□□□ -0.78
PTPRE-202ENST00000306042 ARHGEF37A1IGU5 675 aa10.19□□□□□ -0.78
PTPRE-202ENST00000306042 GOLGA6L9A6NEM1 432 aa10.19□□□□□ -0.78
PTPRE-202ENST00000306042 VCAM1P19320 739 aa10.19□□□□□ -0.78
PTPRE-202ENST00000306042 PHKA2P46019 1235 aa10.19□□□□□ -0.78
PTPRE-202ENST00000306042 LMAN1P49257 510 aa10.19□□□□□ -0.78
PTPRE-202ENST00000306042 TWF2Q6IBS0 349 aaKnown RBP10.19□□□□□ -0.78
PTPRE-202ENST00000306042 NEK9Q8TD19 979 aa10.19□□□□□ -0.78
PTPRE-202ENST00000306042 MRIQ9BWK5 157 aa10.19□□□□□ -0.78
PTPRE-202ENST00000306042 FAM184BQ9ULE4 1060 aa10.19□□□□□ -0.78
PTPRE-202ENST00000306042 TMX2Q9Y320 296 aa10.19□□□□□ -0.78
PTPRE-202ENST00000306042 TMEM110-MUSTN1A8MSY1 372 aa10.19□□□□□ -0.78
PTPRE-202ENST00000306042 N4BP1O75113 896 aaKnown RBP10.19□□□□□ -0.78
PTPRE-202ENST00000306042 P4HBP07237 508 aaKnown RBP10.19□□□□□ -0.78
PTPRE-202ENST00000306042 QARSP47897 775 aaKnown RBP10.19□□□□□ -0.78
PTPRE-202ENST00000306042 GLT1D1Q96MS3 346 aa10.19□□□□□ -0.78
PTPRE-202ENST00000306042 TMEM206Q9H813 350 aa10.19□□□□□ -0.78
PTPRE-202ENST00000306042 C1orf112Q9NSG2 853 aa10.19□□□□□ -0.78
PTPRE-202ENST00000306042 TRMT1Q9NXH9 659 aaKnown RBP10.19□□□□□ -0.78
PTPRE-202ENST00000306042 PCDHA10Q9Y5I2 948 aa10.19□□□□□ -0.78
PTPRE-202ENST00000306042 TMEM88BA6NKF7 163 aa10.19□□□□□ -0.78
PTPRE-202ENST00000306042 ABL1P00519 1130 aa10.19□□□□□ -0.78
PTPRE-202ENST00000306042 CASQ1P31415 396 aa10.19□□□□□ -0.78
PTPRE-202ENST00000306042 FKBP1BP68106 108 aa10.19□□□□□ -0.78
PTPRE-202ENST00000306042 LRMPQ12912 555 aa10.19□□□□□ -0.78
PTPRE-202ENST00000306042 ADAM9Q13443 819 aa10.19□□□□□ -0.78
PTPRE-202ENST00000306042 METTL23Q86XA0 190 aa10.19□□□□□ -0.78
PTPRE-202ENST00000306042 PIGOQ8TEQ8 1089 aa10.19□□□□□ -0.78
PTPRE-202ENST00000306042 HTATIP2Q9BUP3 242 aa10.19□□□□□ -0.78
PTPRE-202ENST00000306042 METTL14Q9HCE5 456 aaKnown RBP10.19□□□□□ -0.78
PTPRE-202ENST00000306042 KRT83P78385 493 aa10.19□□□□□ -0.78
PTPRE-202ENST00000306042 LIN9Q5TKA1 542 aa10.19□□□□□ -0.78
PTPRE-202ENST00000306042 CACTINQ8WUQ7 758 aaKnown RBP10.19□□□□□ -0.78
PTPRE-202ENST00000306042 EXOC4Q96A65 974 aa10.19□□□□□ -0.78
PTPRE-202ENST00000306042 ANKRD36BP1Q96IX9 119 aa10.19□□□□□ -0.78
PTPRE-202ENST00000306042 JADE2Q9NQC1 790 aa10.19□□□□□ -0.78
PTPRE-202ENST00000306042 AKAP12Q02952 1782 aa10.19□□□□□ -0.78
PTPRE-202ENST00000306042 GOLGA6L10A6NI86 522 aa10.18□□□□□ -0.78
PTPRE-202ENST00000306042 STAT5BP51692 787 aa10.18□□□□□ -0.78
PTPRE-202ENST00000306042 MCM6Q14566 821 aa10.18□□□□□ -0.78
PTPRE-202ENST00000306042 CYFIP1Q7L576 1253 aa10.18□□□□□ -0.78
PTPRE-202ENST00000306042 ZBTB33Q86T24 672 aa10.18□□□□□ -0.78
PTPRE-202ENST00000306042 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.18□□□□□ -0.78
PTPRE-202ENST00000306042 IGDCC4Q8TDY8 1250 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms