RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 MEA1Q16626 185 aa14.28□□□□□ -0.12
TRIM35-201ENST00000305364 KRT25Q7Z3Z0 450 aa14.28□□□□□ -0.12
TRIM35-201ENST00000305364 PSMD1Q99460 953 aa14.28□□□□□ -0.12
TRIM35-201ENST00000305364 KANSL2Q9H9L4 492 aa14.28□□□□□ -0.12
TRIM35-201ENST00000305364 BIN2Q9UBW5 565 aaPredicted RBP14.28□□□□□ -0.12
TRIM35-201ENST00000305364 MMEP08473 750 aa14.27□□□□□ -0.12
TRIM35-201ENST00000305364 PKN1Q16512 942 aa14.27□□□□□ -0.12
TRIM35-201ENST00000305364 PFKFB3Q16875 520 aaPredicted RBP14.27□□□□□ -0.12
TRIM35-201ENST00000305364 RAB17Q9H0T7 212 aa14.27□□□□□ -0.12
TRIM35-201ENST00000305364 GRIN2DO15399 1336 aa14.27□□□□□ -0.12
TRIM35-201ENST00000305364 SMCO2A6NFE2 343 aa14.27□□□□□ -0.12
TRIM35-201ENST00000305364 EIF4E1BA6NMX2 242 aaKnown RBP14.27□□□□□ -0.12
TRIM35-201ENST00000305364 ERVV-2B6SEH9 535 aa14.27□□□□□ -0.12
TRIM35-201ENST00000305364 CETN3O15182 167 aa14.27□□□□□ -0.12
TRIM35-201ENST00000305364 DAPK3O43293 454 aa14.27□□□□□ -0.12
TRIM35-201ENST00000305364 ANKRD42Q8N9B4 389 aa14.27□□□□□ -0.12
TRIM35-201ENST00000305364 MTMR8Q96EF0 704 aa14.27□□□□□ -0.12
TRIM35-201ENST00000305364 MTA3Q9BTC8 594 aa14.27□□□□□ -0.12
TRIM35-201ENST00000305364 TRIM9Q9C026 710 aa14.27□□□□□ -0.12
TRIM35-201ENST00000305364 IL2RBP14784 551 aa14.27□□□□□ -0.13
TRIM35-201ENST00000305364 ABCB4P21439 1286 aa14.27□□□□□ -0.13
TRIM35-201ENST00000305364 PAX7P23759 505 aa14.27□□□□□ -0.13
TRIM35-201ENST00000305364 PLTPP55058 493 aa14.27□□□□□ -0.13
TRIM35-201ENST00000305364 CALCRLQ16602 461 aa14.27□□□□□ -0.13
TRIM35-201ENST00000305364 U2AF1L4Q8WU68 220 aaKnown RBP14.27□□□□□ -0.13
TRIM35-201ENST00000305364 KLHL29Q96CT2 875 aa14.27□□□□□ -0.13
TRIM35-201ENST00000305364 GOLPH3Q9H4A6 298 aa14.27□□□□□ -0.13
TRIM35-201ENST00000305364 MAGEF1Q9HAY2 307 aa14.27□□□□□ -0.13
TRIM35-201ENST00000305364 PLCB1Q9NQ66 1216 aa14.27□□□□□ -0.13
TRIM35-201ENST00000305364 AMACRQ9UHK6 382 aa14.27□□□□□ -0.13
TRIM35-201ENST00000305364 SKAP2O75563 359 aaPredicted RBP14.26□□□□□ -0.13
TRIM35-201ENST00000305364 HSD17B3P37058 310 aa14.26□□□□□ -0.13
TRIM35-201ENST00000305364 CDC37Q16543 378 aaPredicted RBP14.26□□□□□ -0.13
TRIM35-201ENST00000305364 FAM83BQ5T0W9 1011 aa14.26□□□□□ -0.13
TRIM35-201ENST00000305364 IRF2BP1Q8IU81 584 aa14.26□□□□□ -0.13
TRIM35-201ENST00000305364 STAG2Q8N3U4 1231 aa14.26□□□□□ -0.13
TRIM35-201ENST00000305364 CHMP6Q96FZ7 201 aa14.26□□□□□ -0.13
TRIM35-201ENST00000305364 ERGIC2Q96RQ1 377 aa14.26□□□□□ -0.13
TRIM35-201ENST00000305364 TLR10Q9BXR5 811 aa14.26□□□□□ -0.13
TRIM35-201ENST00000305364 TMEM60Q9H2L4 133 aa14.26□□□□□ -0.13
TRIM35-201ENST00000305364 CPSF2Q9P2I0 782 aaKnown RBP14.26□□□□□ -0.13
TRIM35-201ENST00000305364 RGPD1P0DJD0 1748 aa14.26□□□□□ -0.13
TRIM35-201ENST00000305364 KLRC1P26715 233 aa14.26□□□□□ -0.13
TRIM35-201ENST00000305364 UBE4AQ14139 1066 aa14.26□□□□□ -0.13
TRIM35-201ENST00000305364 PLCB4Q15147 1175 aa14.26□□□□□ -0.13
TRIM35-201ENST00000305364 AP1ARQ63HQ0 302 aa14.26□□□□□ -0.13
TRIM35-201ENST00000305364 LARP4BQ92615 738 aaKnown RBP14.26□□□□□ -0.13
TRIM35-201ENST00000305364 FMO2Q99518 471 aa14.26□□□□□ -0.13
TRIM35-201ENST00000305364 CNOT10Q9H9A5 744 aaKnown RBP14.26□□□□□ -0.13
TRIM35-201ENST00000305364 DDX20Q9UHI6 824 aaKnown RBP14.26□□□□□ -0.13
TRIM35-201ENST00000305364 AMFRQ9UKV5 643 aa14.26□□□□□ -0.13
TRIM35-201ENST00000305364 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.26□□□□□ -0.13
TRIM35-201ENST00000305364 CCDC169A6NNP5 214 aa14.26□□□□□ -0.13
TRIM35-201ENST00000305364 SART1O43290 800 aaKnown RBP14.26□□□□□ -0.13
TRIM35-201ENST00000305364 FECHP22830 423 aa14.26□□□□□ -0.13
TRIM35-201ENST00000305364 FKBP3Q00688 224 aaKnown RBP14.26□□□□□ -0.13
TRIM35-201ENST00000305364 NEK8Q86SG6 692 aa14.26□□□□□ -0.13
TRIM35-201ENST00000305364 CCDC65Q8IXS2 484 aa14.26□□□□□ -0.13
TRIM35-201ENST00000305364 MDM1Q8TC05 714 aa14.26□□□□□ -0.13
TRIM35-201ENST00000305364 ZNF507Q8TCN5 953 aa14.26□□□□□ -0.13
TRIM35-201ENST00000305364 GGT7Q9UJ14 662 aa14.26□□□□□ -0.13
TRIM35-201ENST00000305364 H2AFZP0C0S5 128 aa14.26□□□□□ -0.13
TRIM35-201ENST00000305364 NEFHP12036 1026 aa14.26□□□□□ -0.13
TRIM35-201ENST00000305364 SCTRP47872 440 aa14.26□□□□□ -0.13
TRIM35-201ENST00000305364 ZKSCAN8Q15776 578 aaPredicted RBP14.26□□□□□ -0.13
TRIM35-201ENST00000305364 PDXDC1Q6P996 788 aa14.26□□□□□ -0.13
TRIM35-201ENST00000305364 H2AFVQ71UI9 128 aa14.26□□□□□ -0.13
TRIM35-201ENST00000305364 FUKQ8N0W3 1084 aa14.26□□□□□ -0.13
TRIM35-201ENST00000305364 GRID2IPA4D2P6 1211 aa14.25□□□□□ -0.13
TRIM35-201ENST00000305364 ITIH3Q06033 890 aa14.25□□□□□ -0.13
TRIM35-201ENST00000305364 CTNNBL1Q8WYA6 563 aaPredicted RBP14.25□□□□□ -0.13
TRIM35-201ENST00000305364 AK8Q96MA6 479 aa14.25□□□□□ -0.13
TRIM35-201ENST00000305364 TCEAL9Q9UHQ7 104 aa14.25□□□□□ -0.13
TRIM35-201ENST00000305364 TPX2Q9ULW0 747 aaKnown RBP14.25□□□□□ -0.13
TRIM35-201ENST00000305364 COL4A3BPQ9Y5P4 624 aa14.25□□□□□ -0.13
TRIM35-201ENST00000305364 IKQ13123 557 aaPredicted RBP14.25□□□□□ -0.13
TRIM35-201ENST00000305364 PREPLQ4J6C6 727 aaPredicted RBP14.25□□□□□ -0.13
TRIM35-201ENST00000305364 TAOK1Q7L7X3 1001 aa14.25□□□□□ -0.13
TRIM35-201ENST00000305364 FBF1Q8TES7 1133 aa14.25□□□□□ -0.13
TRIM35-201ENST00000305364 MIEF2Q96C03 454 aa14.25□□□□□ -0.13
TRIM35-201ENST00000305364 PBKQ96KB5 322 aa14.25□□□□□ -0.13
TRIM35-201ENST00000305364 ZNF287Q9HBT7 754 aa14.25□□□□□ -0.13
TRIM35-201ENST00000305364 FAM114A2Q9NRY5 505 aa14.25□□□□□ -0.13
TRIM35-201ENST00000305364 ASAP1Q9ULH1 1129 aa14.25□□□□□ -0.13
TRIM35-201ENST00000305364 NIP7Q9Y221 180 aaKnown RBP eCLIP14.25□□□□□ -0.13
TRIM35-201ENST00000305364 FMN2Q9NZ56 1722 aa14.25□□□□□ -0.13
TRIM35-201ENST00000305364 A0A1W2PQJ5 194 aa14.25□□□□□ -0.13
TRIM35-201ENST00000305364 SPDYE3A6NKU9 549 aa14.25□□□□□ -0.13
TRIM35-201ENST00000305364 TRIM37O94972 964 aa14.25□□□□□ -0.13
TRIM35-201ENST00000305364 GSCP56915 257 aaPredicted RBP14.25□□□□□ -0.13
TRIM35-201ENST00000305364 SEPT7Q16181 437 aaKnown RBP14.25□□□□□ -0.13
TRIM35-201ENST00000305364 SYCE1Q8N0S2 351 aa14.25□□□□□ -0.13
TRIM35-201ENST00000305364 NOP53Q9NZM5 478 aaKnown RBP14.25□□□□□ -0.13
TRIM35-201ENST00000305364 SATB1Q01826 763 aa14.24□□□□□ -0.13
TRIM35-201ENST00000305364 CCDC6Q16204 474 aa14.24□□□□□ -0.13
TRIM35-201ENST00000305364 FAM26FQ5R3K3 315 aa14.24□□□□□ -0.13
TRIM35-201ENST00000305364 KLHDC7AQ5VTJ3 777 aa14.24□□□□□ -0.13
TRIM35-201ENST00000305364 RAPGEF5Q92565 580 aa14.24□□□□□ -0.13
TRIM35-201ENST00000305364 MTRQ99707 1265 aa14.24□□□□□ -0.13
TRIM35-201ENST00000305364 TRIM7Q9C029 511 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms