RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 PLS1Q14651 629 aa16.21■□□□□ 0.18
SHCBP1-201ENST00000303383 DDX12PQ92771 950 aa16.21■□□□□ 0.18
SHCBP1-201ENST00000303383 ZHX3Q9H4I2 956 aa16.21■□□□□ 0.18
SHCBP1-201ENST00000303383 DNM3Q9UQ16 869 aa16.21■□□□□ 0.18
SHCBP1-201ENST00000303383 POLR2AP24928 1970 aaKnown RBP16.21■□□□□ 0.18
SHCBP1-201ENST00000303383 SBF1O95248 1867 aa16.2■□□□□ 0.18
SHCBP1-201ENST00000303383 E9PMD0 336 aa16.2■□□□□ 0.18
SHCBP1-201ENST00000303383 PES1O00541 588 aaKnown RBP16.2■□□□□ 0.18
SHCBP1-201ENST00000303383 SLC26A4O43511 780 aa16.2■□□□□ 0.18
SHCBP1-201ENST00000303383 SETQ01105 290 aaPredicted RBP16.2■□□□□ 0.18
SHCBP1-201ENST00000303383 COG2Q14746 738 aa16.2■□□□□ 0.18
SHCBP1-201ENST00000303383 UNC13DQ70J99 1090 aa16.2■□□□□ 0.18
SHCBP1-201ENST00000303383 CCDC150Q8NCX0 1101 aa16.2■□□□□ 0.18
SHCBP1-201ENST00000303383 GIMAP8Q8ND71 665 aaPredicted RBP16.2■□□□□ 0.18
SHCBP1-201ENST00000303383 NAP1L5Q96NT1 182 aaPredicted RBP16.2■□□□□ 0.18
SHCBP1-201ENST00000303383 ZNF577Q9BSK1 485 aa16.2■□□□□ 0.18
SHCBP1-201ENST00000303383 VWA5AO00534 786 aa16.2■□□□□ 0.18
SHCBP1-201ENST00000303383 ZNF18P17022 549 aa16.2■□□□□ 0.18
SHCBP1-201ENST00000303383 EAPPQ56P03 285 aaPredicted RBP16.2■□□□□ 0.18
SHCBP1-201ENST00000303383 ADSSL1Q8N142 457 aa16.2■□□□□ 0.18
SHCBP1-201ENST00000303383 CACTINQ8WUQ7 758 aaKnown RBP16.2■□□□□ 0.18
SHCBP1-201ENST00000303383 LENG9Q96B70 501 aa16.2■□□□□ 0.18
SHCBP1-201ENST00000303383 UTRNP46939 3433 aa16.2■□□□□ 0.18
SHCBP1-201ENST00000303383 PVALEFA0A1B0GWK0 134 aa16.2■□□□□ 0.18
SHCBP1-201ENST00000303383 BICDL2A1A5D9 508 aa16.2■□□□□ 0.18
SHCBP1-201ENST00000303383 USP2O75604 605 aaPredicted RBP16.2■□□□□ 0.18
SHCBP1-201ENST00000303383 PLA2G4BP0C869 781 aa16.2■□□□□ 0.18
SHCBP1-201ENST00000303383 CYP4A11Q02928 519 aa16.2■□□□□ 0.18
SHCBP1-201ENST00000303383 KCNK18Q7Z418 384 aa16.2■□□□□ 0.18
SHCBP1-201ENST00000303383 LRRC8AQ8IWT6 810 aa16.2■□□□□ 0.18
SHCBP1-201ENST00000303383 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.2■□□□□ 0.18
SHCBP1-201ENST00000303383 RBM46Q8TBY0 533 aaKnown RBP16.2■□□□□ 0.18
SHCBP1-201ENST00000303383 SLC39A2Q9NP94 309 aa16.2■□□□□ 0.18
SHCBP1-201ENST00000303383 POTEFA5A3E0 1075 aa16.19■□□□□ 0.18
SHCBP1-201ENST00000303383 POTEIP0CG38 1075 aa16.19■□□□□ 0.18
SHCBP1-201ENST00000303383 SNRNP48Q6IEG0 339 aaKnown RBP16.19■□□□□ 0.18
SHCBP1-201ENST00000303383 POTEGQ6S5H5 508 aa16.19■□□□□ 0.18
SHCBP1-201ENST00000303383 POTEEQ6S8J3 1075 aa16.19■□□□□ 0.18
SHCBP1-201ENST00000303383 RNF207Q6ZRF8 634 aa16.19■□□□□ 0.18
SHCBP1-201ENST00000303383 GPBP1Q86WP2 473 aa16.19■□□□□ 0.18
SHCBP1-201ENST00000303383 RNF146Q9NTX7 359 aa16.19■□□□□ 0.18
SHCBP1-201ENST00000303383 HSD17B4P51659 736 aa16.19■□□□□ 0.18
SHCBP1-201ENST00000303383 ECM1Q16610 540 aa16.19■□□□□ 0.18
SHCBP1-201ENST00000303383 NOL9Q5SY16 702 aaKnown RBP16.19■□□□□ 0.18
SHCBP1-201ENST00000303383 DLK2Q6UY11 383 aa16.19■□□□□ 0.18
SHCBP1-201ENST00000303383 DHTKD1Q96HY7 919 aaPredicted RBP16.19■□□□□ 0.18
SHCBP1-201ENST00000303383 MED15Q96RN5 788 aa16.19■□□□□ 0.18
SHCBP1-201ENST00000303383 TCEAL9Q9UHQ7 104 aa16.19■□□□□ 0.18
SHCBP1-201ENST00000303383 PYCARDQ9ULZ3 195 aa16.19■□□□□ 0.18
SHCBP1-201ENST00000303383 MED24O75448 989 aa16.18■□□□□ 0.18
SHCBP1-201ENST00000303383 VGLL4Q14135 290 aa16.18■□□□□ 0.18
SHCBP1-201ENST00000303383 MUM1L1Q5H9M0 696 aa16.18■□□□□ 0.18
SHCBP1-201ENST00000303383 CCDC65Q8IXS2 484 aa16.18■□□□□ 0.18
SHCBP1-201ENST00000303383 PKD2L1Q9P0L9 805 aa16.18■□□□□ 0.18
SHCBP1-201ENST00000303383 MEIS1O00470 390 aa16.18■□□□□ 0.18
SHCBP1-201ENST00000303383 TPM2P07951 284 aa16.18■□□□□ 0.18
SHCBP1-201ENST00000303383 FCER1AP12319 257 aa16.18■□□□□ 0.18
SHCBP1-201ENST00000303383 MYCLP12524 364 aaPredicted RBP16.18■□□□□ 0.18
SHCBP1-201ENST00000303383 SKILP12757 684 aa16.18■□□□□ 0.18
SHCBP1-201ENST00000303383 NOLC1Q14978 699 aaKnown RBP eCLIP16.18■□□□□ 0.18
SHCBP1-201ENST00000303383 C12orf42Q96LP6 360 aa16.18■□□□□ 0.18
SHCBP1-201ENST00000303383 TEKT3Q9BXF9 490 aa16.18■□□□□ 0.18
SHCBP1-201ENST00000303383 HOXC10Q9NYD6 342 aa16.18■□□□□ 0.18
SHCBP1-201ENST00000303383 MAP3K20Q9NYL2 800 aaKnown RBP16.18■□□□□ 0.18
SHCBP1-201ENST00000303383 N4BP3O15049 544 aa16.18■□□□□ 0.18
SHCBP1-201ENST00000303383 EIF2AK2P19525 551 aaKnown RBP16.18■□□□□ 0.18
SHCBP1-201ENST00000303383 RPA1P27694 616 aa16.18■□□□□ 0.18
SHCBP1-201ENST00000303383 EPHX2P34913 555 aa16.18■□□□□ 0.18
SHCBP1-201ENST00000303383 RPS6P62753 249 aaKnown RBP16.18■□□□□ 0.18
SHCBP1-201ENST00000303383 STK4Q13043 487 aa16.18■□□□□ 0.18
SHCBP1-201ENST00000303383 ARID5BQ14865 1188 aa16.18■□□□□ 0.18
SHCBP1-201ENST00000303383 HYIQ5T013 277 aa16.18■□□□□ 0.18
SHCBP1-201ENST00000303383 CATSPER3Q86XQ3 398 aa16.18■□□□□ 0.18
SHCBP1-201ENST00000303383 VSTM4Q8IW00 320 aa16.18■□□□□ 0.18
SHCBP1-201ENST00000303383 CLEC4DQ8WXI8 215 aa16.18■□□□□ 0.18
SHCBP1-201ENST00000303383 WDR11Q9BZH6 1224 aa16.18■□□□□ 0.18
SHCBP1-201ENST00000303383 IGLV3-22A0A075B6J6 115 aa16.17■□□□□ 0.18
SHCBP1-201ENST00000303383 TRIM49BA6NDI0 452 aa16.17■□□□□ 0.18
SHCBP1-201ENST00000303383 DSG3P32926 999 aa16.17■□□□□ 0.18
SHCBP1-201ENST00000303383 RAD51AP2Q09MP3 1159 aa16.17■□□□□ 0.18
SHCBP1-201ENST00000303383 ARHGEF16Q5VV41 709 aa16.17■□□□□ 0.18
SHCBP1-201ENST00000303383 C17orf53Q8N3J3 647 aaPredicted RBP16.17■□□□□ 0.18
SHCBP1-201ENST00000303383 PANK4Q9NVE7 773 aa16.17■□□□□ 0.18
SHCBP1-201ENST00000303383 PABPC4Q13310 644 aaKnown RBP eCLIP16.17■□□□□ 0.187e-12■■■□□ 15.7
SHCBP1-201ENST00000303383 PTPN21Q16825 1174 aa16.17■□□□□ 0.18
SHCBP1-201ENST00000303383 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.17■□□□□ 0.18
SHCBP1-201ENST00000303383 USP50Q70EL3 339 aaPredicted RBP16.17■□□□□ 0.18
SHCBP1-201ENST00000303383 CSGALNACT2Q8N6G5 542 aa16.17■□□□□ 0.18
SHCBP1-201ENST00000303383 SAMD3Q8N6K7 520 aa16.17■□□□□ 0.18
SHCBP1-201ENST00000303383 EIF2AK1Q9BQI3 630 aaKnown RBP16.17■□□□□ 0.18
SHCBP1-201ENST00000303383 MXRA8Q9BRK3 442 aa16.17■□□□□ 0.18
SHCBP1-201ENST00000303383 AFG3L2Q9Y4W6 797 aa16.17■□□□□ 0.18
SHCBP1-201ENST00000303383 KCNJ18B7U540 433 aa16.17■□□□□ 0.18
SHCBP1-201ENST00000303383 DDX39AO00148 427 aaKnown RBP16.17■□□□□ 0.18
SHCBP1-201ENST00000303383 KCNJ12Q14500 433 aa16.17■□□□□ 0.18
SHCBP1-201ENST00000303383 GADL1Q6ZQY3 521 aa16.17■□□□□ 0.18
SHCBP1-201ENST00000303383 TPH2Q8IWU9 490 aa16.17■□□□□ 0.18
SHCBP1-201ENST00000303383 SYTL5Q8TDW5 730 aaPredicted RBP16.17■□□□□ 0.18
SHCBP1-201ENST00000303383 P2RX5Q93086 422 aa16.17■□□□□ 0.18
SHCBP1-201ENST00000303383 HPS3Q969F9 1004 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms