RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 MYH15Q9Y2K3 1946 aa10.78□□□□□ -0.68
RFX3-201ENST00000302303 CASP8AP2Q9UKL3 1982 aa10.78□□□□□ -0.68
RFX3-201ENST00000302303 ASB14A6NK59 587 aa10.78□□□□□ -0.68
RFX3-201ENST00000302303 STAM2O75886 525 aa10.78□□□□□ -0.68
RFX3-201ENST00000302303 ELNP15502 786 aa10.78□□□□□ -0.68
RFX3-201ENST00000302303 GCFC2P16383 781 aaKnown RBP10.78□□□□□ -0.68
RFX3-201ENST00000302303 ATP2C1P98194 919 aaPredicted RBP10.78□□□□□ -0.68
RFX3-201ENST00000302303 GRIN1Q05586 938 aa10.78□□□□□ -0.68
RFX3-201ENST00000302303 PTGDRQ13258 359 aa10.78□□□□□ -0.68
RFX3-201ENST00000302303 SLC39A14Q15043 492 aa10.78□□□□□ -0.68
RFX3-201ENST00000302303 PRR16Q569H4 304 aa10.78□□□□□ -0.68
RFX3-201ENST00000302303 MAP3K21Q5TCX8 1036 aa10.78□□□□□ -0.68
RFX3-201ENST00000302303 EEPD1Q7L9B9 569 aa10.78□□□□□ -0.68
RFX3-201ENST00000302303 UIMC1Q96RL1 719 aa10.78□□□□□ -0.68
RFX3-201ENST00000302303 CNPY2Q9Y2B0 182 aa10.78□□□□□ -0.68
RFX3-201ENST00000302303 MORC2Q9Y6X9 1032 aaPredicted RBP10.78□□□□□ -0.68
RFX3-201ENST00000302303 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.77□□□□□ -0.69
RFX3-201ENST00000302303 BAG4O95429 457 aaKnown RBP10.77□□□□□ -0.69
RFX3-201ENST00000302303 KCNA2P16389 499 aa10.77□□□□□ -0.69
RFX3-201ENST00000302303 CEBPZQ03701 1054 aaKnown RBP10.77□□□□□ -0.69
RFX3-201ENST00000302303 PDE4DQ08499 809 aa10.77□□□□□ -0.69
RFX3-201ENST00000302303 SPIRE1Q08AE8 756 aa10.77□□□□□ -0.69
RFX3-201ENST00000302303 ITGB3BPQ13352 177 aaPredicted RBP10.77□□□□□ -0.69
RFX3-201ENST00000302303 ACVR2BQ13705 512 aa10.77□□□□□ -0.69
RFX3-201ENST00000302303 ATL3Q6DD88 541 aa10.77□□□□□ -0.69
RFX3-201ENST00000302303 PLA2G4DQ86XP0 818 aa10.77□□□□□ -0.69
RFX3-201ENST00000302303 FBXO16Q8IX29 292 aaPredicted RBP10.77□□□□□ -0.69
RFX3-201ENST00000302303 PXYLP1Q8TE99 480 aa10.77□□□□□ -0.69
RFX3-201ENST00000302303 SLC5A5Q92911 643 aa10.77□□□□□ -0.69
RFX3-201ENST00000302303 GPRASP2Q96D09 838 aa10.77□□□□□ -0.69
RFX3-201ENST00000302303 EHMT1Q9H9B1 1298 aa10.77□□□□□ -0.69
RFX3-201ENST00000302303 GDPD2Q9HCC8 539 aa10.77□□□□□ -0.69
RFX3-201ENST00000302303 AGO4Q9HCK5 861 aaKnown RBP10.77□□□□□ -0.69
RFX3-201ENST00000302303 DDX25Q9UHL0 483 aaKnown RBP10.77□□□□□ -0.69
RFX3-201ENST00000302303 NOL7Q9UMY1 257 aaKnown RBP10.77□□□□□ -0.69
RFX3-201ENST00000302303 PTPN22Q9Y2R2 807 aa10.77□□□□□ -0.69
RFX3-201ENST00000302303 TRIM17Q9Y577 477 aa10.77□□□□□ -0.69
RFX3-201ENST00000302303 PTCH2Q9Y6C5 1203 aa10.77□□□□□ -0.69
RFX3-201ENST00000302303 TCHHQ07283 1943 aa10.77□□□□□ -0.69
RFX3-201ENST00000302303 MAFGO15525 162 aa10.76□□□□□ -0.69
RFX3-201ENST00000302303 ADCY3O60266 1144 aa10.76□□□□□ -0.69
RFX3-201ENST00000302303 PSMD10O75832 226 aa10.76□□□□□ -0.69
RFX3-201ENST00000302303 CYBAP13498 195 aa10.76□□□□□ -0.69
RFX3-201ENST00000302303 HOXD10P28358 340 aa10.76□□□□□ -0.69
RFX3-201ENST00000302303 CTCFP49711 727 aaPredicted RBP10.76□□□□□ -0.69
RFX3-201ENST00000302303 PRMT2P55345 433 aa10.76□□□□□ -0.69
RFX3-201ENST00000302303 CACNB2Q08289 660 aaPredicted RBP10.76□□□□□ -0.69
RFX3-201ENST00000302303 ORC2Q13416 577 aaPredicted RBP10.76□□□□□ -0.69
RFX3-201ENST00000302303 SEPT14Q6ZU15 432 aa10.76□□□□□ -0.69
RFX3-201ENST00000302303 LEO1Q8WVC0 666 aaPredicted RBP10.76□□□□□ -0.69
RFX3-201ENST00000302303 ABHD16BQ9H3Z7 469 aa10.76□□□□□ -0.69
RFX3-201ENST00000302303 VTA1Q9NP79 307 aa10.76□□□□□ -0.69
RFX3-201ENST00000302303 SLC5A4Q9NY91 659 aa10.76□□□□□ -0.69
RFX3-201ENST00000302303 DDX41Q9UJV9 622 aaKnown RBP10.76□□□□□ -0.69
RFX3-201ENST00000302303 FBXO2Q9UK22 296 aaPredicted RBP10.76□□□□□ -0.69
RFX3-201ENST00000302303 KIAA1217Q5T5P2 1943 aa10.75□□□□□ -0.69
RFX3-201ENST00000302303 TBX3O15119 743 aa10.75□□□□□ -0.69
RFX3-201ENST00000302303 FIBPO43427 364 aa10.75□□□□□ -0.69
RFX3-201ENST00000302303 NEMFO60524 1076 aa10.75□□□□□ -0.69
RFX3-201ENST00000302303 YEATS4O95619 227 aa10.75□□□□□ -0.69
RFX3-201ENST00000302303 ZNF76P36508 570 aa10.75□□□□□ -0.69
RFX3-201ENST00000302303 ADCYAP1R1P41586 468 aa10.75□□□□□ -0.69
RFX3-201ENST00000302303 MTMR1Q13613 665 aa10.75□□□□□ -0.69
RFX3-201ENST00000302303 LY6KQ17RY6 165 aa10.75□□□□□ -0.69
RFX3-201ENST00000302303 AXDND1Q5T1B0 1012 aaPredicted RBP10.75□□□□□ -0.69
RFX3-201ENST00000302303 GJC2Q5T442 439 aaPredicted RBP10.75□□□□□ -0.69
RFX3-201ENST00000302303 COPS5Q92905 334 aa10.75□□□□□ -0.69
RFX3-201ENST00000302303 ZNF396Q96N95 335 aaPredicted RBP10.75□□□□□ -0.69
RFX3-201ENST00000302303 VAV3Q9UKW4 847 aa10.75□□□□□ -0.69
RFX3-201ENST00000302303 IPO5O00410 1097 aaKnown RBP10.74□□□□□ -0.69
RFX3-201ENST00000302303 TGFB3P10600 412 aa10.74□□□□□ -0.69
RFX3-201ENST00000302303 SMPD1P17405 629 aa10.74□□□□□ -0.69
RFX3-201ENST00000302303 MARCKSP29966 332 aaPredicted RBP10.74□□□□□ -0.69
RFX3-201ENST00000302303 PRPHP41219 470 aa10.74□□□□□ -0.69
RFX3-201ENST00000302303 IRX5P78411 483 aaPredicted RBP10.74□□□□□ -0.69
RFX3-201ENST00000302303 CCDC144BQ3MJ40 725 aa10.74□□□□□ -0.69
RFX3-201ENST00000302303 FAM20AQ96MK3 541 aa10.74□□□□□ -0.69
RFX3-201ENST00000302303 CLIC6Q96NY7 704 aa10.74□□□□□ -0.69
RFX3-201ENST00000302303 NAP1L4Q99733 375 aaKnown RBP10.74□□□□□ -0.69
RFX3-201ENST00000302303 SENP7Q9BQF6 1050 aa10.74□□□□□ -0.69
RFX3-201ENST00000302303 GNEQ9Y223 722 aaKnown RBP10.74□□□□□ -0.69
RFX3-201ENST00000302303 ATP6V1DQ9Y5K8 247 aa10.74□□□□□ -0.69
RFX3-201ENST00000302303 SRPRBQ9Y5M8 271 aaKnown RBP10.74□□□□□ -0.69
RFX3-201ENST00000302303 B4DLN1 442 aa10.74□□□□□ -0.69
RFX3-201ENST00000302303 EML1O00423 815 aa10.74□□□□□ -0.69
RFX3-201ENST00000302303 SPTLC2O15270 562 aa10.74□□□□□ -0.69
RFX3-201ENST00000302303 CTAGE5O15320 804 aa10.74□□□□□ -0.69
RFX3-201ENST00000302303 PPP6R2O75170 966 aa10.74□□□□□ -0.69
RFX3-201ENST00000302303 CCNE2O96020 404 aa10.74□□□□□ -0.69
RFX3-201ENST00000302303 OR52Z1P0C646 297 aa10.74□□□□□ -0.69
RFX3-201ENST00000302303 UBA1P22314 1058 aaKnown RBP10.74□□□□□ -0.69
RFX3-201ENST00000302303 CCND3P30281 292 aaPredicted RBP10.74□□□□□ -0.69
RFX3-201ENST00000302303 KRT85P78386 507 aa10.74□□□□□ -0.69
RFX3-201ENST00000302303 SETQ01105 290 aaPredicted RBP10.74□□□□□ -0.69
RFX3-201ENST00000302303 ARHGEF6Q15052 776 aa10.74□□□□□ -0.69
RFX3-201ENST00000302303 CALCRLQ16602 461 aa10.74□□□□□ -0.69
RFX3-201ENST00000302303 ARL6IP4Q66PJ3 421 aaKnown RBP10.74□□□□□ -0.69
RFX3-201ENST00000302303 USP49Q70CQ1 688 aa10.74□□□□□ -0.69
RFX3-201ENST00000302303 NLRX1Q86UT6 975 aa10.74□□□□□ -0.69
RFX3-201ENST00000302303 TRMT44Q8IYL2 757 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 236.9 ms