RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 DSG3P32926 999 aa24.93■■□□□ 1.58
SMAD1-201ENST00000302085 DDX12PQ92771 950 aa24.93■■□□□ 1.58
SMAD1-201ENST00000302085 SLC5A5Q92911 643 aa24.93■■□□□ 1.58
SMAD1-201ENST00000302085 ADAMTS5Q9UNA0 930 aa24.93■■□□□ 1.58
SMAD1-201ENST00000302085 VGLL4Q14135 290 aa24.93■■□□□ 1.58
SMAD1-201ENST00000302085 TPD52L1Q16890 204 aaPredicted RBP24.93■■□□□ 1.58
SMAD1-201ENST00000302085 REPS2Q8NFH8 660 aa24.93■■□□□ 1.58
SMAD1-201ENST00000302085 ERMNQ8TAM6 284 aa24.93■■□□□ 1.58
SMAD1-201ENST00000302085 SYTL5Q8TDW5 730 aaPredicted RBP24.93■■□□□ 1.58
SMAD1-201ENST00000302085 PNMA2Q9UL42 364 aa24.93■■□□□ 1.58
SMAD1-201ENST00000302085 RLFQ13129 1914 aa24.92■■□□□ 1.58
SMAD1-201ENST00000302085 EML1O00423 815 aa24.92■■□□□ 1.58
SMAD1-201ENST00000302085 PMS1P54277 932 aaKnown RBP24.92■■□□□ 1.58
SMAD1-201ENST00000302085 GSDMDP57764 484 aa24.92■■□□□ 1.58
SMAD1-201ENST00000302085 NR1I3Q14994 352 aa24.92■■□□□ 1.58
SMAD1-201ENST00000302085 PTPN21Q16825 1174 aa24.92■■□□□ 1.58
SMAD1-201ENST00000302085 HAUS3Q68CZ6 603 aa24.92■■□□□ 1.58
SMAD1-201ENST00000302085 DPY19L2Q6NUT2 758 aa24.92■■□□□ 1.58
SMAD1-201ENST00000302085 SLC30A10Q6XR72 485 aa24.92■■□□□ 1.58
SMAD1-201ENST00000302085 CATSPERGQ6ZRH7 1159 aa24.92■■□□□ 1.58
SMAD1-201ENST00000302085 HPS3Q969F9 1004 aa24.92■■□□□ 1.58
SMAD1-201ENST00000302085 TRERF1Q96PN7 1200 aa24.92■■□□□ 1.58
SMAD1-201ENST00000302085 GTPBP4Q9BZE4 634 aaKnown RBP24.92■■□□□ 1.58
SMAD1-201ENST00000302085 UTRNP46939 3433 aa24.92■■□□□ 1.58
SMAD1-201ENST00000302085 PSMD10O75832 226 aa24.91■■□□□ 1.58
SMAD1-201ENST00000302085 PLA2G4BP0C869 781 aa24.91■■□□□ 1.58
SMAD1-201ENST00000302085 ARP10275 920 aa24.91■■□□□ 1.58
SMAD1-201ENST00000302085 RPA1P27694 616 aa24.91■■□□□ 1.58
SMAD1-201ENST00000302085 STIM1Q13586 685 aa24.91■■□□□ 1.58
SMAD1-201ENST00000302085 COG2Q14746 738 aa24.91■■□□□ 1.58
SMAD1-201ENST00000302085 OTOP1Q7RTM1 612 aa24.91■■□□□ 1.58
SMAD1-201ENST00000302085 DNAJC19Q96DA6 116 aa24.91■■□□□ 1.58
SMAD1-201ENST00000302085 DHTKD1Q96HY7 919 aaPredicted RBP24.91■■□□□ 1.58
SMAD1-201ENST00000302085 L3MBTL3Q96JM7 780 aaPredicted RBP24.91■■□□□ 1.58
SMAD1-201ENST00000302085 MAP3K20Q9NYL2 800 aaKnown RBP24.91■■□□□ 1.58
SMAD1-201ENST00000302085 TMOD4Q9NZQ9 345 aa24.91■■□□□ 1.58
SMAD1-201ENST00000302085 STK24Q9Y6E0 443 aa24.91■■□□□ 1.58
SMAD1-201ENST00000302085 A0A1B0GTH6 734 aa24.91■■□□□ 1.58
SMAD1-201ENST00000302085 POTEFA5A3E0 1075 aa24.91■■□□□ 1.58
SMAD1-201ENST00000302085 TRIM49BA6NDI0 452 aa24.91■■□□□ 1.58
SMAD1-201ENST00000302085 POTEIP0CG38 1075 aa24.91■■□□□ 1.58
SMAD1-201ENST00000302085 POTEGQ6S5H5 508 aa24.91■■□□□ 1.58
SMAD1-201ENST00000302085 POTEEQ6S8J3 1075 aa24.91■■□□□ 1.58
SMAD1-201ENST00000302085 KRT26Q7Z3Y9 468 aa24.91■■□□□ 1.58
SMAD1-201ENST00000302085 SAMD3Q8N6K7 520 aa24.91■■□□□ 1.58
SMAD1-201ENST00000302085 KIAA0895Q8NCT3 520 aa24.91■■□□□ 1.58
SMAD1-201ENST00000302085 MXRA8Q9BRK3 442 aa24.91■■□□□ 1.58
SMAD1-201ENST00000302085 RABGAP1Q9Y3P9 1069 aa24.91■■□□□ 1.58
SMAD1-201ENST00000302085 RIPK3Q9Y572 518 aa24.91■■□□□ 1.58
SMAD1-201ENST00000302085 PSMA7O14818 248 aa24.9■■□□□ 1.58
SMAD1-201ENST00000302085 NOLC1Q14978 699 aaKnown RBP eCLIP24.9■■□□□ 1.58
SMAD1-201ENST00000302085 COBLL1Q53SF7 1204 aa24.9■■□□□ 1.58
SMAD1-201ENST00000302085 SH3D19Q5HYK7 790 aa24.9■■□□□ 1.58
SMAD1-201ENST00000302085 ARMCX5Q6P1M9 558 aa24.9■■□□□ 1.58
SMAD1-201ENST00000302085 IL31RAQ8NI17 732 aa24.9■■□□□ 1.58
SMAD1-201ENST00000302085 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.9■■□□□ 1.58
SMAD1-201ENST00000302085 SSBP05455 408 aaKnown RBP eCLIP24.89■■□□□ 1.58
SMAD1-201ENST00000302085 ITGB5P18084 799 aa24.89■■□□□ 1.58
SMAD1-201ENST00000302085 PSMC6P62333 389 aa24.89■■□□□ 1.58
SMAD1-201ENST00000302085 EHHADHQ08426 723 aa24.89■■□□□ 1.58
SMAD1-201ENST00000302085 TAAR1Q96RJ0 339 aa24.89■■□□□ 1.58
SMAD1-201ENST00000302085 SLC39A2Q9NP94 309 aa24.89■■□□□ 1.58
SMAD1-201ENST00000302085 RPS6P62753 249 aaKnown RBP24.89■■□□□ 1.57
SMAD1-201ENST00000302085 LRCH2Q5VUJ6 765 aa24.89■■□□□ 1.57
SMAD1-201ENST00000302085 TTI2Q6NXR4 508 aa24.89■■□□□ 1.57
SMAD1-201ENST00000302085 EIF2AK1Q9BQI3 630 aaKnown RBP24.89■■□□□ 1.57
SMAD1-201ENST00000302085 POLR3CQ9BUI4 534 aaPredicted RBP24.89■■□□□ 1.57
SMAD1-201ENST00000302085 ADD3Q9UEY8 706 aaKnown RBP24.89■■□□□ 1.57
SMAD1-201ENST00000302085 LIMA1Q9UHB6 759 aaKnown RBP24.89■■□□□ 1.57
SMAD1-201ENST00000302085 PPP1R12BO60237 982 aaPredicted RBP24.88■■□□□ 1.57
SMAD1-201ENST00000302085 IDEP14735 1019 aa24.88■■□□□ 1.57
SMAD1-201ENST00000302085 PPP2R5CQ13362 524 aa24.88■■□□□ 1.57
SMAD1-201ENST00000302085 USP50Q70EL3 339 aaPredicted RBP24.88■■□□□ 1.57
SMAD1-201ENST00000302085 IRF2BP1Q8IU81 584 aa24.88■■□□□ 1.57
SMAD1-201ENST00000302085 LRRC10BA6NIK2 292 aa24.87■■□□□ 1.57
SMAD1-201ENST00000302085 SLC12A3P55017 1021 aa24.87■■□□□ 1.57
SMAD1-201ENST00000302085 CCZ1BP86790 482 aa24.87■■□□□ 1.57
SMAD1-201ENST00000302085 CCZ1P86791 482 aaPredicted RBP24.87■■□□□ 1.57
SMAD1-201ENST00000302085 SETQ01105 290 aaPredicted RBP24.87■■□□□ 1.57
SMAD1-201ENST00000302085 CNKSR2Q8WXI2 1034 aa24.87■■□□□ 1.57
SMAD1-201ENST00000302085 P2RX5Q93086 422 aa24.87■■□□□ 1.57
SMAD1-201ENST00000302085 DUSP9Q99956 384 aaKnown RBP24.87■■□□□ 1.57
SMAD1-201ENST00000302085 ZNF577Q9BSK1 485 aa24.87■■□□□ 1.57
SMAD1-201ENST00000302085 RNF146Q9NTX7 359 aa24.87■■□□□ 1.57
SMAD1-201ENST00000302085 SPTLC3Q9NUV7 552 aa24.87■■□□□ 1.57
SMAD1-201ENST00000302085 TEX33O43247 280 aa24.87■■□□□ 1.57
SMAD1-201ENST00000302085 CYP11B2P19099 503 aa24.87■■□□□ 1.57
SMAD1-201ENST00000302085 CCNE1P24864 410 aa24.87■■□□□ 1.57
SMAD1-201ENST00000302085 EPHX2P34913 555 aa24.87■■□□□ 1.57
SMAD1-201ENST00000302085 OAZ1P54368 228 aa24.87■■□□□ 1.57
SMAD1-201ENST00000302085 TMEM132BQ14DG7 1078 aa24.87■■□□□ 1.57
SMAD1-201ENST00000302085 KRT31Q15323 416 aa24.87■■□□□ 1.57
SMAD1-201ENST00000302085 ARSHQ5FYA8 562 aa24.87■■□□□ 1.57
SMAD1-201ENST00000302085 RNF207Q6ZRF8 634 aa24.87■■□□□ 1.57
SMAD1-201ENST00000302085 GPBP1Q86WP2 473 aa24.87■■□□□ 1.57
SMAD1-201ENST00000302085 CCDC150Q8NCX0 1101 aa24.87■■□□□ 1.57
SMAD1-201ENST00000302085 RBM46Q8TBY0 533 aaKnown RBP24.87■■□□□ 1.57
SMAD1-201ENST00000302085 CTAGE1Q96RT6 745 aa24.87■■□□□ 1.57
SMAD1-201ENST00000302085 HSD17B14Q9BPX1 270 aa24.87■■□□□ 1.57
SMAD1-201ENST00000302085 BMP2KQ9NSY1 1161 aaPredicted RBP24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms