RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 TSGA10Q9BZW7 698 aa27.01■■□□□ 1.91
SPTSSA-201ENST00000298130 DDX4Q9NQI0 724 aaKnown RBP27.01■■□□□ 1.91
SPTSSA-201ENST00000298130 ZSCAN5CA6NGD5 496 aaPredicted RBP27■■□□□ 1.91
SPTSSA-201ENST00000298130 MPHOSPH10O00566 681 aaKnown RBP27■■□□□ 1.91
SPTSSA-201ENST00000298130 COASYQ13057 564 aa27■■□□□ 1.91
SPTSSA-201ENST00000298130 SHROOM1Q2M3G4 852 aaPredicted RBP27■■□□□ 1.91
SPTSSA-201ENST00000298130 MSL3Q8N5Y2 521 aaKnown RBP27■■□□□ 1.91
SPTSSA-201ENST00000298130 JMJD4Q9H9V9 463 aa27■■□□□ 1.91
SPTSSA-201ENST00000298130 DDX25Q9UHL0 483 aaKnown RBP27■■□□□ 1.91
SPTSSA-201ENST00000298130 GGA1Q9UJY5 639 aa27■■□□□ 1.91
SPTSSA-201ENST00000298130 DDX60LQ5H9U9 1706 aaKnown RBP27■■□□□ 1.91
SPTSSA-201ENST00000298130 ESYT3A0FGR9 886 aa27■■□□□ 1.91
SPTSSA-201ENST00000298130 FXR2P51116 673 aaKnown RBP eCLIP27■■□□□ 1.91
SPTSSA-201ENST00000298130 CDK17Q00537 523 aa27■■□□□ 1.91
SPTSSA-201ENST00000298130 USP17L15C9J2P7 530 aa26.99■■□□□ 1.91
SPTSSA-201ENST00000298130 USP17L10C9JJH3 530 aa26.99■■□□□ 1.91
SPTSSA-201ENST00000298130 USP17L13C9JLJ4 530 aa26.99■■□□□ 1.91
SPTSSA-201ENST00000298130 USP17L11C9JVI0 530 aa26.99■■□□□ 1.91
SPTSSA-201ENST00000298130 USP17L18D6R9N7 530 aa26.99■■□□□ 1.91
SPTSSA-201ENST00000298130 USP17L22D6RA61 530 aa26.99■■□□□ 1.91
SPTSSA-201ENST00000298130 USP17L17D6RBQ6 530 aa26.99■■□□□ 1.91
SPTSSA-201ENST00000298130 USP17L19D6RCP7 530 aa26.99■■□□□ 1.91
SPTSSA-201ENST00000298130 USP17L20D6RJB6 530 aa26.99■■□□□ 1.91
SPTSSA-201ENST00000298130 FTCDO95954 541 aa26.99■■□□□ 1.91
SPTSSA-201ENST00000298130 POLR2FP61218 127 aaKnown RBP26.99■■□□□ 1.91
SPTSSA-201ENST00000298130 USP17L24Q0WX57 530 aa26.99■■□□□ 1.91
SPTSSA-201ENST00000298130 USP17L6PQ6QN14 398 aa26.99■■□□□ 1.91
SPTSSA-201ENST00000298130 RPGRIP1Q96KN7 1286 aa26.99■■□□□ 1.91
SPTSSA-201ENST00000298130 RBM12Q9NTZ6 932 aaKnown RBP26.99■■□□□ 1.91
SPTSSA-201ENST00000298130 DAGLAQ9Y4D2 1042 aa26.99■■□□□ 1.91
SPTSSA-201ENST00000298130 STAT3P40763 770 aa26.99■■□□□ 1.91
SPTSSA-201ENST00000298130 AARSP49588 968 aaKnown RBP eCLIP26.99■■□□□ 1.91
SPTSSA-201ENST00000298130 PPARDQ03181 441 aa26.99■■□□□ 1.91
SPTSSA-201ENST00000298130 VIPAS39Q9H9C1 493 aa26.99■■□□□ 1.91
SPTSSA-201ENST00000298130 STK17AQ9UEE5 414 aa26.99■■□□□ 1.91
SPTSSA-201ENST00000298130 NRAPQ86VF7 1730 aa26.99■■□□□ 1.91
SPTSSA-201ENST00000298130 NAV1Q8NEY1 1877 aa26.99■■□□□ 1.91
SPTSSA-201ENST00000298130 MAST2Q6P0Q8 1798 aa26.99■■□□□ 1.91
SPTSSA-201ENST00000298130 PVALEFA0A1B0GWK0 134 aa26.98■■□□□ 1.91
SPTSSA-201ENST00000298130 GOLGA6BA6NDN3 693 aa26.98■■□□□ 1.91
SPTSSA-201ENST00000298130 TLR2O60603 784 aa26.98■■□□□ 1.91
SPTSSA-201ENST00000298130 HNRNPH3P31942 346 aaKnown RBP26.98■■□□□ 1.91
SPTSSA-201ENST00000298130 SCNN1DP51172 638 aa26.98■■□□□ 1.91
SPTSSA-201ENST00000298130 PDXDC1Q6P996 788 aa26.98■■□□□ 1.91
SPTSSA-201ENST00000298130 MYOCDQ8IZQ8 938 aa26.98■■□□□ 1.91
SPTSSA-201ENST00000298130 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP26.98■■□□□ 1.91
SPTSSA-201ENST00000298130 LSM14BQ9BX40 385 aaKnown RBP26.98■■□□□ 1.91
SPTSSA-201ENST00000298130 PANK4Q9NVE7 773 aa26.98■■□□□ 1.91
SPTSSA-201ENST00000298130 KIAA1024Q9UPX6 916 aa26.98■■□□□ 1.91
SPTSSA-201ENST00000298130 FAM196BA6NMK8 535 aa26.98■■□□□ 1.91
SPTSSA-201ENST00000298130 HGSNATQ68CP4 663 aa26.98■■□□□ 1.91
SPTSSA-201ENST00000298130 TLR10Q9BXR5 811 aa26.98■■□□□ 1.91
SPTSSA-201ENST00000298130 MCM3P25205 808 aa26.97■■□□□ 1.91
SPTSSA-201ENST00000298130 FNBP4Q8N3X1 1017 aaPredicted RBP26.97■■□□□ 1.91
SPTSSA-201ENST00000298130 DNAJC19Q96DA6 116 aa26.97■■□□□ 1.91
SPTSSA-201ENST00000298130 POTEB3A0JP26 581 aa26.97■■□□□ 1.91
SPTSSA-201ENST00000298130 POTECB2RU33 542 aa26.97■■□□□ 1.91
SPTSSA-201ENST00000298130 SNAP25P60880 206 aa26.97■■□□□ 1.91
SPTSSA-201ENST00000298130 POTEBQ6S5H4 581 aa26.97■■□□□ 1.91
SPTSSA-201ENST00000298130 CCDC84Q86UT8 332 aaPredicted RBP26.97■■□□□ 1.91
SPTSSA-201ENST00000298130 TSEN2Q8NCE0 465 aaKnown RBP26.97■■□□□ 1.91
SPTSSA-201ENST00000298130 AENQ8WTP8 325 aaKnown RBP26.97■■□□□ 1.91
SPTSSA-201ENST00000298130 PACSIN1Q9BY11 444 aa26.97■■□□□ 1.91
SPTSSA-201ENST00000298130 TAL1P17542 331 aaPredicted RBP26.97■■□□□ 1.91
SPTSSA-201ENST00000298130 ALS2CR12Q96Q35 445 aa26.97■■□□□ 1.91
SPTSSA-201ENST00000298130 NOL4O94818 638 aa26.96■■□□□ 1.91
SPTSSA-201ENST00000298130 KLHDC7AQ5VTJ3 777 aa26.96■■□□□ 1.91
SPTSSA-201ENST00000298130 BBXQ8WY36 941 aaPredicted RBP26.96■■□□□ 1.91
SPTSSA-201ENST00000298130 TSG101Q99816 390 aa26.96■■□□□ 1.91
SPTSSA-201ENST00000298130 GOLPH3Q9H4A6 298 aa26.96■■□□□ 1.91
SPTSSA-201ENST00000298130 HYOU1Q9Y4L1 999 aa26.96■■□□□ 1.91
SPTSSA-201ENST00000298130 SBF2Q86WG5 1849 aa26.96■■□□□ 1.91
SPTSSA-201ENST00000298130 PPP1R2P41236 205 aa26.96■■□□□ 1.91
SPTSSA-201ENST00000298130 FAM26FQ5R3K3 315 aa26.96■■□□□ 1.91
SPTSSA-201ENST00000298130 FAM83BQ5T0W9 1011 aa26.96■■□□□ 1.91
SPTSSA-201ENST00000298130 HAUS3Q68CZ6 603 aa26.96■■□□□ 1.91
SPTSSA-201ENST00000298130 RAB34Q9BZG1 259 aa26.96■■□□□ 1.91
SPTSSA-201ENST00000298130 FAM184BQ9ULE4 1060 aa26.96■■□□□ 1.91
SPTSSA-201ENST00000298130 PCDHA12Q9UN75 941 aa26.96■■□□□ 1.91
SPTSSA-201ENST00000298130 LRRC63Q05C16 580 aa26.95■■□□□ 1.91
SPTSSA-201ENST00000298130 RAPGEF1Q13905 1077 aa26.95■■□□□ 1.91
SPTSSA-201ENST00000298130 TBC1D5Q92609 795 aa26.95■■□□□ 1.91
SPTSSA-201ENST00000298130 COL4A3BPQ9Y5P4 624 aa26.95■■□□□ 1.91
SPTSSA-201ENST00000298130 ESYT2A0FGR8 921 aa26.95■■□□□ 1.9
SPTSSA-201ENST00000298130 SEMA3FQ13275 785 aa26.95■■□□□ 1.9
SPTSSA-201ENST00000298130 CCDC70Q6NSX1 233 aa26.95■■□□□ 1.9
SPTSSA-201ENST00000298130 PROCA1Q8NCQ7 364 aaPredicted RBP26.95■■□□□ 1.9
SPTSSA-201ENST00000298130 BCAS3Q9H6U6 928 aa26.95■■□□□ 1.9
SPTSSA-201ENST00000298130 TRADDQ15628 312 aa26.94■■□□□ 1.9
SPTSSA-201ENST00000298130 ASTE1Q2TB18 679 aaPredicted RBP26.94■■□□□ 1.9
SPTSSA-201ENST00000298130 TMEM119Q4V9L6 283 aa26.94■■□□□ 1.9
SPTSSA-201ENST00000298130 HERC4Q5GLZ8 1057 aaPredicted RBP26.94■■□□□ 1.9
SPTSSA-201ENST00000298130 IQCEQ6IPM2 695 aa26.94■■□□□ 1.9
SPTSSA-201ENST00000298130 MMGT1Q8N4V1 131 aa26.94■■□□□ 1.9
SPTSSA-201ENST00000298130 FAM133AQ8N9E0 248 aa26.94■■□□□ 1.9
SPTSSA-201ENST00000298130 TBC1D16Q8TBP0 767 aa26.94■■□□□ 1.9
SPTSSA-201ENST00000298130 GOLGA6CA6NDK9 693 aa26.94■■□□□ 1.9
SPTSSA-201ENST00000298130 PALMO75781 387 aa26.94■■□□□ 1.9
SPTSSA-201ENST00000298130 GOLGA6DP0CG33 693 aa26.94■■□□□ 1.9
SPTSSA-201ENST00000298130 GOLGA6AQ9NYA3 693 aa26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms