RNA–Protein interactions for RNA: ENST00000297439.3

DEFB1-201, Transcript of defensin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEFB1, Length 478 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEFB1-201ENST00000297439 PDE6BP35913 854 aa7.35□□□□□ -1.23
DEFB1-201ENST00000297439 PTPN5P54829 565 aa7.35□□□□□ -1.23
DEFB1-201ENST00000297439 GTF2IP78347 998 aa7.35□□□□□ -1.23
DEFB1-201ENST00000297439 ASIC1P78348 528 aa7.35□□□□□ -1.23
DEFB1-201ENST00000297439 STK4Q13043 487 aa7.35□□□□□ -1.23
DEFB1-201ENST00000297439 TRAF1Q13077 416 aa7.35□□□□□ -1.23
DEFB1-201ENST00000297439 TERF2Q15554 542 aa7.35□□□□□ -1.23
DEFB1-201ENST00000297439 MAN2A1Q16706 1144 aa7.35□□□□□ -1.23
DEFB1-201ENST00000297439 KRT79Q5XKE5 535 aa7.35□□□□□ -1.23
DEFB1-201ENST00000297439 ANKRD40Q6AI12 368 aa7.35□□□□□ -1.23
DEFB1-201ENST00000297439 APOBEC3HQ6NTF7 200 aaKnown RBP7.35□□□□□ -1.23
DEFB1-201ENST00000297439 TATDN1Q6P1N9 297 aa7.35□□□□□ -1.23
DEFB1-201ENST00000297439 LRRC55Q6ZSA7 311 aa7.35□□□□□ -1.23
DEFB1-201ENST00000297439 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.35□□□□□ -1.23
DEFB1-201ENST00000297439 TRAPPC11Q7Z392 1133 aa7.35□□□□□ -1.23
DEFB1-201ENST00000297439 ZNF572Q7Z3I7 529 aaPredicted RBP7.35□□□□□ -1.23
DEFB1-201ENST00000297439 CERS5Q8N5B7 392 aa7.35□□□□□ -1.23
DEFB1-201ENST00000297439 KIAA0895Q8NCT3 520 aa7.35□□□□□ -1.23
DEFB1-201ENST00000297439 GMCL1P1Q8NEA9 526 aa7.35□□□□□ -1.23
DEFB1-201ENST00000297439 CRYGNQ8WXF5 182 aa7.35□□□□□ -1.23
DEFB1-201ENST00000297439 RAD54LQ92698 747 aa7.35□□□□□ -1.23
DEFB1-201ENST00000297439 SYN2Q92777 582 aaPredicted RBP7.35□□□□□ -1.23
DEFB1-201ENST00000297439 CNOT6LQ96LI5 555 aaKnown RBP7.35□□□□□ -1.23
DEFB1-201ENST00000297439 CEP63Q96MT8 703 aa7.35□□□□□ -1.23
DEFB1-201ENST00000297439 ZC3H12CQ9C0D7 883 aaKnown RBP7.35□□□□□ -1.23
DEFB1-201ENST00000297439 ZMYND15Q9H091 742 aa7.35□□□□□ -1.23
DEFB1-201ENST00000297439 JMJD4Q9H9V9 463 aa7.35□□□□□ -1.23
DEFB1-201ENST00000297439 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.35□□□□□ -1.23
DEFB1-201ENST00000297439 SIK3Q9Y2K2 1263 aa7.35□□□□□ -1.23
DEFB1-201ENST00000297439 REXO2Q9Y3B8 237 aaKnown RBP7.35□□□□□ -1.23
DEFB1-201ENST00000297439 V9GYY5 206 aaPredicted RBP7.35□□□□□ -1.23
DEFB1-201ENST00000297439 COL11A2P13942 1736 aaPredicted RBP7.35□□□□□ -1.23
DEFB1-201ENST00000297439 MYH8P13535 1937 aa7.35□□□□□ -1.23
DEFB1-201ENST00000297439 SIPA1L1O43166 1804 aa7.34□□□□□ -1.23
DEFB1-201ENST00000297439 SSU72P8A0A1W2PR75 194 aa7.34□□□□□ -1.23
DEFB1-201ENST00000297439 FRMD3A2A2Y4 597 aa7.34□□□□□ -1.23
DEFB1-201ENST00000297439 TARSL2A2RTX5 802 aaKnown RBP7.34□□□□□ -1.23
DEFB1-201ENST00000297439 CTAGE15A4D2H0 777 aa7.34□□□□□ -1.23
DEFB1-201ENST00000297439 MYMKA6NI61 221 aa7.34□□□□□ -1.23
DEFB1-201ENST00000297439 RASSF10A6NK89 507 aa7.34□□□□□ -1.23
DEFB1-201ENST00000297439 SLC37A4O43826 429 aa7.34□□□□□ -1.23
DEFB1-201ENST00000297439 ERLIN1O75477 346 aa7.34□□□□□ -1.23
DEFB1-201ENST00000297439 IPO7O95373 1038 aaKnown RBP7.34□□□□□ -1.23
DEFB1-201ENST00000297439 FOSP01100 380 aaPredicted RBP7.34□□□□□ -1.23
DEFB1-201ENST00000297439 CTAGE8P0CG41 777 aa7.34□□□□□ -1.23
DEFB1-201ENST00000297439 TECP42680 631 aa7.34□□□□□ -1.23
DEFB1-201ENST00000297439 PLA2G4AP47712 749 aa7.34□□□□□ -1.23
DEFB1-201ENST00000297439 VAV2P52735 878 aa7.34□□□□□ -1.23
DEFB1-201ENST00000297439 CKAP4Q07065 602 aaKnown RBP7.34□□□□□ -1.23
DEFB1-201ENST00000297439 TBC1D8BQ0IIM8 1120 aa7.34□□□□□ -1.23
DEFB1-201ENST00000297439 PTPN21Q16825 1174 aa7.34□□□□□ -1.23
DEFB1-201ENST00000297439 KIF4BQ2VIQ3 1234 aa7.34□□□□□ -1.23
DEFB1-201ENST00000297439 VWA3BQ502W6 1294 aa7.34□□□□□ -1.23
DEFB1-201ENST00000297439 ZNF569Q5MCW4 686 aa7.34□□□□□ -1.23
DEFB1-201ENST00000297439 PPP1R15BQ5SWA1 713 aa7.34□□□□□ -1.23
DEFB1-201ENST00000297439 STRIP1Q5VSL9 837 aa7.34□□□□□ -1.23
DEFB1-201ENST00000297439 CDC42EP5Q6NZY7 148 aa7.34□□□□□ -1.23
DEFB1-201ENST00000297439 DPP8Q6V1X1 898 aaPredicted RBP7.34□□□□□ -1.23
DEFB1-201ENST00000297439 CTAGE6Q86UF2 777 aa7.34□□□□□ -1.23
DEFB1-201ENST00000297439 CTAGE4Q8IX94 777 aa7.34□□□□□ -1.23
DEFB1-201ENST00000297439 SLFN12Q8IYM2 578 aa7.34□□□□□ -1.23
DEFB1-201ENST00000297439 ADGRF4Q8IZF3 695 aa7.34□□□□□ -1.23
DEFB1-201ENST00000297439 SLC35F6Q8N357 371 aa7.34□□□□□ -1.23
DEFB1-201ENST00000297439 CCDC155Q8N6L0 562 aa7.34□□□□□ -1.23
DEFB1-201ENST00000297439 ACRBPQ8NEB7 543 aa7.34□□□□□ -1.23
DEFB1-201ENST00000297439 SNX29Q8TEQ0 813 aa7.34□□□□□ -1.23
DEFB1-201ENST00000297439 CPLX3Q8WVH0 158 aa7.34□□□□□ -1.23
DEFB1-201ENST00000297439 DNAJC19Q96DA6 116 aa7.34□□□□□ -1.23
DEFB1-201ENST00000297439 MASTLQ96GX5 879 aa7.34□□□□□ -1.23
DEFB1-201ENST00000297439 GMCL1Q96IK5 515 aa7.34□□□□□ -1.23
DEFB1-201ENST00000297439 GPR101Q96P66 508 aaPredicted RBP7.34□□□□□ -1.23
DEFB1-201ENST00000297439 FUT8Q9BYC5 575 aa7.34□□□□□ -1.23
DEFB1-201ENST00000297439 PARD6BQ9BYG5 372 aa7.34□□□□□ -1.23
DEFB1-201ENST00000297439 SEMA6BQ9H3T3 888 aa7.34□□□□□ -1.23
DEFB1-201ENST00000297439 KANSL2Q9H9L4 492 aa7.34□□□□□ -1.23
DEFB1-201ENST00000297439 KCNMB3Q9NPA1 279 aa7.34□□□□□ -1.23
DEFB1-201ENST00000297439 LZTFL1Q9NQ48 299 aa7.34□□□□□ -1.23
DEFB1-201ENST00000297439 DDX4Q9NQI0 724 aaKnown RBP7.34□□□□□ -1.23
DEFB1-201ENST00000297439 USP40Q9NVE5 1235 aa7.34□□□□□ -1.23
DEFB1-201ENST00000297439 WDR70Q9NW82 654 aa7.34□□□□□ -1.23
DEFB1-201ENST00000297439 SERPINA10Q9UK55 444 aa7.34□□□□□ -1.23
DEFB1-201ENST00000297439 B4DLN1 442 aa7.33□□□□□ -1.24
DEFB1-201ENST00000297439 RBAK-RBAKDNI3L0D1 243 aa7.33□□□□□ -1.24
DEFB1-201ENST00000297439 PJA2O43164 708 aa7.33□□□□□ -1.24
DEFB1-201ENST00000297439 PPP1R11O60927 126 aaPredicted RBP7.33□□□□□ -1.24
DEFB1-201ENST00000297439 ENTPD3O75355 529 aa7.33□□□□□ -1.24
DEFB1-201ENST00000297439 CLSTN1O94985 981 aa7.33□□□□□ -1.24
DEFB1-201ENST00000297439 TDP2O95551 362 aa7.33□□□□□ -1.24
DEFB1-201ENST00000297439 TRIM21P19474 475 aaKnown RBP7.33□□□□□ -1.24
DEFB1-201ENST00000297439 MUTP22033 750 aa7.33□□□□□ -1.24
DEFB1-201ENST00000297439 ANXA13P27216 316 aa7.33□□□□□ -1.24
DEFB1-201ENST00000297439 CIITAP33076 1130 aa7.33□□□□□ -1.24
DEFB1-201ENST00000297439 MTIF2P46199 727 aaKnown RBP7.33□□□□□ -1.24
DEFB1-201ENST00000297439 HERVK_113P62684 666 aa7.33□□□□□ -1.24
DEFB1-201ENST00000297439 FKBP3Q00688 224 aaKnown RBP7.33□□□□□ -1.24
DEFB1-201ENST00000297439 EDRF1Q3B7T1 1238 aa7.33□□□□□ -1.24
DEFB1-201ENST00000297439 Q4G0T1 1027 aa7.33□□□□□ -1.24
DEFB1-201ENST00000297439 GRIPAP1Q4V328 841 aa7.33□□□□□ -1.24
DEFB1-201ENST00000297439 TEX35Q5T0J7 233 aa7.33□□□□□ -1.24
DEFB1-201ENST00000297439 TAF3Q5VWG9 929 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms