RNA–Protein interactions for RNA: ENST00000297265.4

CHMP4C-201, Transcript of charged multivesicular body protein 4C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4C-201ENST00000297265 DDNO94850 711 aaPredicted RBP15.19■□□□□ 0.02
CHMP4C-201ENST00000297265 CCNE1P24864 410 aa15.19■□□□□ 0.02
CHMP4C-201ENST00000297265 RPA1P27694 616 aa15.19■□□□□ 0.02
CHMP4C-201ENST00000297265 SLC12A3P55017 1021 aa15.19■□□□□ 0.02
CHMP4C-201ENST00000297265 ARSHQ5FYA8 562 aa15.19■□□□□ 0.02
CHMP4C-201ENST00000297265 E4F1Q66K89 784 aaPredicted RBP15.19■□□□□ 0.02
CHMP4C-201ENST00000297265 DLK2Q6UY11 383 aa15.19■□□□□ 0.02
CHMP4C-201ENST00000297265 OTOP1Q7RTM1 612 aa15.19■□□□□ 0.02
CHMP4C-201ENST00000297265 GLIS3Q8NEA6 775 aa15.19■□□□□ 0.02
CHMP4C-201ENST00000297265 ZFP91Q96JP5 570 aaPredicted RBP15.19■□□□□ 0.02
CHMP4C-201ENST00000297265 CTAGE1Q96RT6 745 aa15.19■□□□□ 0.02
CHMP4C-201ENST00000297265 RPAP3Q9H6T3 665 aaPredicted RBP15.19■□□□□ 0.02
CHMP4C-201ENST00000297265 PPP1R9AQ9ULJ8 1098 aa15.19■□□□□ 0.02
CHMP4C-201ENST00000297265 RBBP6Q7Z6E9 1792 aaKnown RBP15.19■□□□□ 0.02
CHMP4C-201ENST00000297265 POTEFA5A3E0 1075 aa15.18■□□□□ 0.02
CHMP4C-201ENST00000297265 KCNJ18B7U540 433 aa15.18■□□□□ 0.02
CHMP4C-201ENST00000297265 MEIS1O00470 390 aa15.18■□□□□ 0.02
CHMP4C-201ENST00000297265 PSMA7O14818 248 aa15.18■□□□□ 0.02
CHMP4C-201ENST00000297265 NKRFO15226 690 aaKnown RBP eCLIP15.18■□□□□ 0.02
CHMP4C-201ENST00000297265 POTEIP0CG38 1075 aa15.18■□□□□ 0.02
CHMP4C-201ENST00000297265 KCNJ12Q14500 433 aa15.18■□□□□ 0.02
CHMP4C-201ENST00000297265 TPD52L1Q16890 204 aaPredicted RBP15.18■□□□□ 0.02
CHMP4C-201ENST00000297265 MUM1L1Q5H9M0 696 aa15.18■□□□□ 0.02
CHMP4C-201ENST00000297265 CEP135Q66GS9 1140 aa15.18■□□□□ 0.02
CHMP4C-201ENST00000297265 CENPPQ6IPU0 288 aa15.18■□□□□ 0.02
CHMP4C-201ENST00000297265 POTEGQ6S5H5 508 aa15.18■□□□□ 0.02
CHMP4C-201ENST00000297265 POTEEQ6S8J3 1075 aa15.18■□□□□ 0.02
CHMP4C-201ENST00000297265 ZNF280CQ8ND82 737 aa15.18■□□□□ 0.02
CHMP4C-201ENST00000297265 P2RX5Q93086 422 aa15.18■□□□□ 0.02
CHMP4C-201ENST00000297265 HOOK2Q96ED9 719 aa15.18■□□□□ 0.02
CHMP4C-201ENST00000297265 SRRTQ9BXP5 876 aaKnown RBP15.18■□□□□ 0.02
CHMP4C-201ENST00000297265 RAVER2Q9HCJ3 691 aaKnown RBP15.18■□□□□ 0.02
CHMP4C-201ENST00000297265 PCDHA2Q9Y5H9 948 aa15.18■□□□□ 0.02
CHMP4C-201ENST00000297265 RPTORQ8N122 1335 aa15.18■□□□□ 0.02
CHMP4C-201ENST00000297265 FLOT1O75955 427 aa15.18■□□□□ 0.02
CHMP4C-201ENST00000297265 PLA2G4BP0C869 781 aa15.18■□□□□ 0.02
CHMP4C-201ENST00000297265 CYP11B2P19099 503 aa15.18■□□□□ 0.02
CHMP4C-201ENST00000297265 COPB1P53618 953 aaKnown RBP15.18■□□□□ 0.02
CHMP4C-201ENST00000297265 CEP55Q53EZ4 464 aa15.18■□□□□ 0.02
CHMP4C-201ENST00000297265 B3GNT9Q6UX72 402 aa15.18■□□□□ 0.02
CHMP4C-201ENST00000297265 CPXCR1Q8N123 301 aa15.18■□□□□ 0.02
CHMP4C-201ENST00000297265 SLC5A5Q92911 643 aa15.18■□□□□ 0.02
CHMP4C-201ENST00000297265 HSD17B14Q9BPX1 270 aa15.18■□□□□ 0.02
CHMP4C-201ENST00000297265 TANGO6Q9C0B7 1094 aa15.18■□□□□ 0.02
CHMP4C-201ENST00000297265 R3HCC1Q9Y3T6 440 aaKnown RBP15.18■□□□□ 0.02
CHMP4C-201ENST00000297265 ARP10275 920 aa15.17■□□□□ 0.02
CHMP4C-201ENST00000297265 ZNF76P36508 570 aa15.17■□□□□ 0.02
CHMP4C-201ENST00000297265 KCNJ6P48051 423 aa15.17■□□□□ 0.02
CHMP4C-201ENST00000297265 USP14P54578 494 aa15.17■□□□□ 0.02
CHMP4C-201ENST00000297265 ADKP55263 362 aaKnown RBP15.17■□□□□ 0.02
CHMP4C-201ENST00000297265 STIM1Q13586 685 aa15.17■□□□□ 0.02
CHMP4C-201ENST00000297265 NCAPH2Q6IBW4 605 aa15.17■□□□□ 0.02
CHMP4C-201ENST00000297265 CCAR2Q8N163 923 aaKnown RBP15.17■□□□□ 0.02
CHMP4C-201ENST00000297265 C12orf42Q96LP6 360 aa15.17■□□□□ 0.02
CHMP4C-201ENST00000297265 SYT17Q9BSW7 474 aa15.17■□□□□ 0.02
CHMP4C-201ENST00000297265 GTPBP4Q9BZE4 634 aaKnown RBP15.17■□□□□ 0.02
CHMP4C-201ENST00000297265 LRRC27Q9C0I9 530 aa15.17■□□□□ 0.02
CHMP4C-201ENST00000297265 VPS16Q9H269 839 aa15.17■□□□□ 0.02
CHMP4C-201ENST00000297265 THAP9Q9H5L6 903 aa15.17■□□□□ 0.02
CHMP4C-201ENST00000297265 PPP2R3BQ9Y5P8 575 aa15.17■□□□□ 0.02
CHMP4C-201ENST00000297265 ZHX2Q9Y6X8 837 aa15.17■□□□□ 0.02
CHMP4C-201ENST00000297265 NPHP3-ACAD11A0A0J9YXS1 232 aa15.16■□□□□ 0.02
CHMP4C-201ENST00000297265 VWA5AO00534 786 aa15.16■□□□□ 0.02
CHMP4C-201ENST00000297265 USP2O75604 605 aaPredicted RBP15.16■□□□□ 0.02
CHMP4C-201ENST00000297265 YBX3P16989 372 aaKnown RBP eCLIP15.16■□□□□ 0.02
CHMP4C-201ENST00000297265 ITGB5P18084 799 aa15.16■□□□□ 0.02
CHMP4C-201ENST00000297265 SPAG1Q07617 926 aa15.16■□□□□ 0.02
CHMP4C-201ENST00000297265 GUF1Q8N442 669 aaKnown RBP15.16■□□□□ 0.02
CHMP4C-201ENST00000297265 REPS2Q8NFH8 660 aa15.16■□□□□ 0.02
CHMP4C-201ENST00000297265 ZNF507Q8TCN5 953 aa15.16■□□□□ 0.02
CHMP4C-201ENST00000297265 CCDC47Q96A33 483 aaKnown RBP15.16■□□□□ 0.02
CHMP4C-201ENST00000297265 EEF2KMTQ96G04 330 aa15.16■□□□□ 0.02
CHMP4C-201ENST00000297265 FGFBP2Q9BYJ0 223 aa15.16■□□□□ 0.02
CHMP4C-201ENST00000297265 TAB2Q9NYJ8 693 aa15.16■□□□□ 0.02
CHMP4C-201ENST00000297265 ADAMTS5Q9UNA0 930 aa15.16■□□□□ 0.02
CHMP4C-201ENST00000297265 COL11A1P12107 1806 aaPredicted RBP15.16■□□□□ 0.02
CHMP4C-201ENST00000297265 FRMD3A2A2Y4 597 aa15.16■□□□□ 0.02
CHMP4C-201ENST00000297265 IDEP14735 1019 aa15.16■□□□□ 0.02
CHMP4C-201ENST00000297265 PPP1R2P41236 205 aa15.16■□□□□ 0.02
CHMP4C-201ENST00000297265 COASYQ13057 564 aa15.16■□□□□ 0.02
CHMP4C-201ENST00000297265 PSMD2Q13200 908 aa15.16■□□□□ 0.02
CHMP4C-201ENST00000297265 PPP2R5CQ13362 524 aa15.16■□□□□ 0.02
CHMP4C-201ENST00000297265 HAUS3Q68CZ6 603 aa15.16■□□□□ 0.02
CHMP4C-201ENST00000297265 NYAP1Q6ZVC0 841 aa15.16■□□□□ 0.02
CHMP4C-201ENST00000297265 SYT2Q8N9I0 419 aaPredicted RBP15.16■□□□□ 0.02
CHMP4C-201ENST00000297265 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.16■□□□□ 0.02
CHMP4C-201ENST00000297265 IL31RAQ8NI17 732 aa15.16■□□□□ 0.02
CHMP4C-201ENST00000297265 ATG4CQ96DT6 458 aa15.16■□□□□ 0.02
CHMP4C-201ENST00000297265 TRIM47Q96LD4 638 aa15.16■□□□□ 0.02
CHMP4C-201ENST00000297265 EIF2AK1Q9BQI3 630 aaKnown RBP15.16■□□□□ 0.02
CHMP4C-201ENST00000297265 POLR3CQ9BUI4 534 aaPredicted RBP15.16■□□□□ 0.02
CHMP4C-201ENST00000297265 RGL1Q9NZL6 768 aa15.16■□□□□ 0.02
CHMP4C-201ENST00000297265 RIPK3Q9Y572 518 aa15.16■□□□□ 0.02
CHMP4C-201ENST00000297265 RNF225M0QZC1 329 aaPredicted RBP15.15■□□□□ 0.02
CHMP4C-201ENST00000297265 N4BP3O15049 544 aa15.15■□□□□ 0.02
CHMP4C-201ENST00000297265 SLITRK3O94933 977 aa15.15■□□□□ 0.02
CHMP4C-201ENST00000297265 ALAS1P13196 640 aa15.15■□□□□ 0.02
CHMP4C-201ENST00000297265 EEF1GP26641 437 aaKnown RBP15.15■□□□□ 0.02
CHMP4C-201ENST00000297265 TERF1P54274 439 aa15.15■□□□□ 0.02
CHMP4C-201ENST00000297265 HMGCS2P54868 508 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms