RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 GRB10Q13322 594 aa10.33□□□□□ -0.76
PRDM9-201ENST00000296682 STRIP1Q5VSL9 837 aa10.33□□□□□ -0.76
PRDM9-201ENST00000296682 TMC4Q7Z404 712 aa10.33□□□□□ -0.76
PRDM9-201ENST00000296682 TMEM139Q8IV31 216 aa10.33□□□□□ -0.76
PRDM9-201ENST00000296682 TTLL6Q8N841 843 aa10.33□□□□□ -0.76
PRDM9-201ENST00000296682 FLAD1Q8NFF5 587 aa10.33□□□□□ -0.76
PRDM9-201ENST00000296682 CCSER1Q9C0I3 900 aa10.33□□□□□ -0.76
PRDM9-201ENST00000296682 BHMT2Q9H2M3 363 aa10.33□□□□□ -0.76
PRDM9-201ENST00000296682 RIOX1Q9H6W3 641 aa10.33□□□□□ -0.76
PRDM9-201ENST00000296682 DNAJC18Q9H819 358 aa10.33□□□□□ -0.76
PRDM9-201ENST00000296682 ADAMTSL1Q8N6G6 1762 aa10.33□□□□□ -0.76
PRDM9-201ENST00000296682 GAKO14976 1311 aa10.33□□□□□ -0.76
PRDM9-201ENST00000296682 TBCAO75347 108 aaKnown RBP10.33□□□□□ -0.76
PRDM9-201ENST00000296682 PRPF6O94906 941 aaKnown RBP10.33□□□□□ -0.76
PRDM9-201ENST00000296682 CXCR5P32302 372 aa10.33□□□□□ -0.76
PRDM9-201ENST00000296682 RAPGEF1Q13905 1077 aa10.33□□□□□ -0.76
PRDM9-201ENST00000296682 SYDE2Q5VT97 1194 aa10.33□□□□□ -0.76
PRDM9-201ENST00000296682 HHIPL2Q6UWX4 724 aa10.33□□□□□ -0.76
PRDM9-201ENST00000296682 TMTC1Q8IUR5 882 aa10.33□□□□□ -0.76
PRDM9-201ENST00000296682 KSR1Q8IVT5 923 aa10.33□□□□□ -0.76
PRDM9-201ENST00000296682 MYOCDQ8IZQ8 938 aa10.33□□□□□ -0.76
PRDM9-201ENST00000296682 MYH7BA7E2Y1 1941 aa10.33□□□□□ -0.76
PRDM9-201ENST00000296682 SHTN1A0MZ66 631 aa10.32□□□□□ -0.76
PRDM9-201ENST00000296682 ZBTB39O15060 712 aa10.32□□□□□ -0.76
PRDM9-201ENST00000296682 GCNT3O95395 438 aa10.32□□□□□ -0.76
PRDM9-201ENST00000296682 PLEKP08567 350 aaPredicted RBP10.32□□□□□ -0.76
PRDM9-201ENST00000296682 PLA2G4BP0C869 781 aa10.32□□□□□ -0.76
PRDM9-201ENST00000296682 PBX1P40424 430 aa10.32□□□□□ -0.76
PRDM9-201ENST00000296682 JAG1P78504 1218 aa10.32□□□□□ -0.76
PRDM9-201ENST00000296682 CCDC93Q567U6 631 aa10.32□□□□□ -0.76
PRDM9-201ENST00000296682 DACT2Q5SW24 774 aa10.32□□□□□ -0.76
PRDM9-201ENST00000296682 SH3BP5LQ7L8J4 393 aa10.32□□□□□ -0.76
PRDM9-201ENST00000296682 FAM114A1Q8IWE2 563 aa10.32□□□□□ -0.76
PRDM9-201ENST00000296682 DHX36Q9H2U1 1008 aaKnown RBP10.32□□□□□ -0.76
PRDM9-201ENST00000296682 ARHGEF10LQ9HCE6 1279 aa10.32□□□□□ -0.76
PRDM9-201ENST00000296682 DNM3Q9UQ16 869 aa10.32□□□□□ -0.76
PRDM9-201ENST00000296682 DUSP10Q9Y6W6 482 aa10.32□□□□□ -0.76
PRDM9-201ENST00000296682 BUB1O43683 1085 aa10.32□□□□□ -0.76
PRDM9-201ENST00000296682 DPEP1P16444 411 aa10.32□□□□□ -0.76
PRDM9-201ENST00000296682 USP8P40818 1118 aa10.32□□□□□ -0.76
PRDM9-201ENST00000296682 PSMC6P62333 389 aa10.32□□□□□ -0.76
PRDM9-201ENST00000296682 ERVK-24P63145 666 aa10.32□□□□□ -0.76
PRDM9-201ENST00000296682 SLC15A2Q16348 729 aa10.32□□□□□ -0.76
PRDM9-201ENST00000296682 ECM1Q16610 540 aa10.32□□□□□ -0.76
PRDM9-201ENST00000296682 DNAAF5Q86Y56 855 aa10.32□□□□□ -0.76
PRDM9-201ENST00000296682 CCDC65Q8IXS2 484 aa10.32□□□□□ -0.76
PRDM9-201ENST00000296682 NIM1KQ8IY84 436 aa10.32□□□□□ -0.76
PRDM9-201ENST00000296682 AK8Q96MA6 479 aa10.32□□□□□ -0.76
PRDM9-201ENST00000296682 GLIS2Q9BZE0 524 aaPredicted RBP10.32□□□□□ -0.76
PRDM9-201ENST00000296682 BCAS3Q9H6U6 928 aa10.32□□□□□ -0.76
PRDM9-201ENST00000296682 L2HGDHQ9H9P8 463 aa10.32□□□□□ -0.76
PRDM9-201ENST00000296682 MYH4Q9Y623 1939 aa10.32□□□□□ -0.76
PRDM9-201ENST00000296682 A0A0U1RQG5 324 aaPredicted RBP10.32□□□□□ -0.76
PRDM9-201ENST00000296682 A0A1W2PRG0 241 aa10.32□□□□□ -0.76
PRDM9-201ENST00000296682 GOLGA6L9A6NEM1 432 aa10.32□□□□□ -0.76
PRDM9-201ENST00000296682 LAD1O00515 517 aa10.32□□□□□ -0.76
PRDM9-201ENST00000296682 DNM2P50570 870 aa10.32□□□□□ -0.76
PRDM9-201ENST00000296682 NBPF9Q3BBW0 867 aa10.32□□□□□ -0.76
PRDM9-201ENST00000296682 TMEM179Q6ZVK1 233 aa10.32□□□□□ -0.76
PRDM9-201ENST00000296682 SYCP3Q8IZU3 236 aa10.32□□□□□ -0.76
PRDM9-201ENST00000296682 MYCT1Q8N699 235 aa10.32□□□□□ -0.76
PRDM9-201ENST00000296682 NEK11Q8NG66 645 aa10.32□□□□□ -0.76
PRDM9-201ENST00000296682 MMTAG2Q9BU76 263 aaKnown RBP10.32□□□□□ -0.76
PRDM9-201ENST00000296682 ZMYND15Q9H091 742 aa10.32□□□□□ -0.76
PRDM9-201ENST00000296682 KBTBD4Q9NVX7 518 aa10.32□□□□□ -0.76
PRDM9-201ENST00000296682 POLR2FP61218 127 aaKnown RBP10.31□□□□□ -0.76
PRDM9-201ENST00000296682 ADAM9Q13443 819 aa10.31□□□□□ -0.76
PRDM9-201ENST00000296682 CDKAL1Q5VV42 579 aa10.31□□□□□ -0.76
PRDM9-201ENST00000296682 PNMA5Q96PV4 448 aa10.31□□□□□ -0.76
PRDM9-201ENST00000296682 SPAG5Q96R06 1193 aa10.31□□□□□ -0.76
PRDM9-201ENST00000296682 RIC8AQ9NPQ8 531 aa10.31□□□□□ -0.76
PRDM9-201ENST00000296682 TMCO5BA8MYB1 307 aa10.31□□□□□ -0.76
PRDM9-201ENST00000296682 NOP2P46087 812 aaKnown RBP10.31□□□□□ -0.76
PRDM9-201ENST00000296682 STAT2P52630 851 aa10.31□□□□□ -0.76
PRDM9-201ENST00000296682 CHMP4BP1P59074 171 aa10.31□□□□□ -0.76
PRDM9-201ENST00000296682 KIF5AQ12840 1032 aa10.31□□□□□ -0.76
PRDM9-201ENST00000296682 TRIM65Q6PJ69 517 aa10.31□□□□□ -0.76
PRDM9-201ENST00000296682 KIAA0895Q8NCT3 520 aa10.31□□□□□ -0.76
PRDM9-201ENST00000296682 GIMAP8Q8ND71 665 aaPredicted RBP10.31□□□□□ -0.76
PRDM9-201ENST00000296682 ERMNQ8TAM6 284 aa10.31□□□□□ -0.76
PRDM9-201ENST00000296682 JAKMIP2Q96AA8 810 aa10.31□□□□□ -0.76
PRDM9-201ENST00000296682 ZDHHC15Q96MV8 337 aa10.31□□□□□ -0.76
PRDM9-201ENST00000296682 IKZF4Q9H2S9 585 aa10.31□□□□□ -0.76
PRDM9-201ENST00000296682 SEMA6BQ9H3T3 888 aa10.31□□□□□ -0.76
PRDM9-201ENST00000296682 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.31□□□□□ -0.76
PRDM9-201ENST00000296682 LRRC10BA6NIK2 292 aa10.31□□□□□ -0.76
PRDM9-201ENST00000296682 NDUFA10O95299 355 aa10.31□□□□□ -0.76
PRDM9-201ENST00000296682 CYLC1P35663 651 aaPredicted RBP10.31□□□□□ -0.76
PRDM9-201ENST00000296682 GABPAQ06546 454 aa10.31□□□□□ -0.76
PRDM9-201ENST00000296682 COBLL1Q53SF7 1204 aa10.31□□□□□ -0.76
PRDM9-201ENST00000296682 RAD54LQ92698 747 aa10.31□□□□□ -0.76
PRDM9-201ENST00000296682 DHTKD1Q96HY7 919 aaPredicted RBP10.31□□□□□ -0.76
PRDM9-201ENST00000296682 ZNF341Q9BYN7 854 aa10.31□□□□□ -0.76
PRDM9-201ENST00000296682 NDST4Q9H3R1 872 aa10.31□□□□□ -0.76
PRDM9-201ENST00000296682 COL2A1P02458 1487 aaPredicted RBP10.31□□□□□ -0.76
PRDM9-201ENST00000296682 KLRC4O43908 158 aa10.3□□□□□ -0.76
PRDM9-201ENST00000296682 RHOBTB3O94955 611 aa10.3□□□□□ -0.76
PRDM9-201ENST00000296682 FAM13AO94988 1023 aa10.3□□□□□ -0.76
PRDM9-201ENST00000296682 IRF2BP1Q8IU81 584 aa10.3□□□□□ -0.76
PRDM9-201ENST00000296682 BLOC1S4Q9NUP1 217 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms