RNA–Protein interactions for RNA: ENST00000296142.3

RTP3-201, Transcript of receptor transporter protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTP3, Length 1,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTP3-201ENST00000296142 VAT1LQ9HCJ6 419 aa9.81□□□□□ -0.84
RTP3-201ENST00000296142 HDAC6Q9UBN7 1215 aa9.81□□□□□ -0.84
RTP3-201ENST00000296142 COG5Q9UP83 839 aa9.81□□□□□ -0.84
RTP3-201ENST00000296142 ZNF318Q5VUA4 2279 aa9.8□□□□□ -0.84
RTP3-201ENST00000296142 ORC4O43929 436 aa9.8□□□□□ -0.84
RTP3-201ENST00000296142 FGAP02671 866 aa9.8□□□□□ -0.84
RTP3-201ENST00000296142 MMP3P08254 477 aa9.8□□□□□ -0.84
RTP3-201ENST00000296142 CKBP12277 381 aa9.8□□□□□ -0.84
RTP3-201ENST00000296142 SELPP16109 830 aa9.8□□□□□ -0.84
RTP3-201ENST00000296142 SSTR3P32745 418 aaPredicted RBP9.8□□□□□ -0.84
RTP3-201ENST00000296142 RFC2P35250 354 aa9.8□□□□□ -0.84
RTP3-201ENST00000296142 ZNF543Q08ER8 600 aa9.8□□□□□ -0.84
RTP3-201ENST00000296142 HIC1Q14526 733 aa9.8□□□□□ -0.84
RTP3-201ENST00000296142 CCDC62Q6P9F0 684 aa9.8□□□□□ -0.84
RTP3-201ENST00000296142 ZNF589Q86UQ0 364 aaPredicted RBP9.8□□□□□ -0.84
RTP3-201ENST00000296142 PHOSPHO2Q8TCD6 241 aa9.8□□□□□ -0.84
RTP3-201ENST00000296142 SEZ6LQ9BYH1 1024 aa9.8□□□□□ -0.84
RTP3-201ENST00000296142 OSBPL7Q9BZF2 842 aa9.8□□□□□ -0.84
RTP3-201ENST00000296142 UBE2ZQ9H832 354 aaPredicted RBP9.8□□□□□ -0.84
RTP3-201ENST00000296142 SH2B1Q9NRF2 756 aaPredicted RBP9.8□□□□□ -0.84
RTP3-201ENST00000296142 CYP46A1Q9Y6A2 500 aa9.8□□□□□ -0.84
RTP3-201ENST00000296142 LINC01553A4QN01 128 aa9.79□□□□□ -0.84
RTP3-201ENST00000296142 H3BQ06 376 aaPredicted RBP9.79□□□□□ -0.84
RTP3-201ENST00000296142 TRAK2O60296 914 aa9.79□□□□□ -0.84
RTP3-201ENST00000296142 UPP2O95045 317 aa9.79□□□□□ -0.84
RTP3-201ENST00000296142 GH1P01241 217 aa9.79□□□□□ -0.84
RTP3-201ENST00000296142 NCLP19338 710 aaKnown RBP9.79□□□□□ -0.84
RTP3-201ENST00000296142 EIF2AK2P19525 551 aaKnown RBP9.79□□□□□ -0.84
RTP3-201ENST00000296142 EDNRBP24530 442 aa9.79□□□□□ -0.84
RTP3-201ENST00000296142 PSEN2P49810 448 aa9.79□□□□□ -0.84
RTP3-201ENST00000296142 ARHGAP1Q07960 439 aa9.79□□□□□ -0.84
RTP3-201ENST00000296142 MBTPS1Q14703 1052 aa9.79□□□□□ -0.84
RTP3-201ENST00000296142 ZNF618Q5T7W0 954 aa9.79□□□□□ -0.84
RTP3-201ENST00000296142 CLEC17AQ6ZS10 378 aa9.79□□□□□ -0.84
RTP3-201ENST00000296142 TBC1D10CQ8IV04 446 aa9.79□□□□□ -0.84
RTP3-201ENST00000296142 MYOCDQ8IZQ8 938 aa9.79□□□□□ -0.84
RTP3-201ENST00000296142 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.79□□□□□ -0.84
RTP3-201ENST00000296142 TNPO1Q92973 898 aaKnown RBP9.79□□□□□ -0.84
RTP3-201ENST00000296142 ANAPC4Q9UJX5 808 aa9.79□□□□□ -0.84
RTP3-201ENST00000296142 ATP6V1DQ9Y5K8 247 aa9.79□□□□□ -0.84
RTP3-201ENST00000296142 NEDD4P46934 1319 aa9.78□□□□□ -0.84
RTP3-201ENST00000296142 CCDC171Q6TFL3 1326 aa9.78□□□□□ -0.84
RTP3-201ENST00000296142 NKRFO15226 690 aaKnown RBP eCLIP9.78□□□□□ -0.84
RTP3-201ENST00000296142 DHX16O60231 1041 aaKnown RBP9.78□□□□□ -0.84
RTP3-201ENST00000296142 KPNA6O60684 536 aa9.78□□□□□ -0.84
RTP3-201ENST00000296142 BAIAP3O94812 1187 aa9.78□□□□□ -0.84
RTP3-201ENST00000296142 GJB5O95377 273 aa9.78□□□□□ -0.84
RTP3-201ENST00000296142 MYCLP12524 364 aaPredicted RBP9.78□□□□□ -0.84
RTP3-201ENST00000296142 NOVP48745 357 aa9.78□□□□□ -0.84
RTP3-201ENST00000296142 NMIQ13287 307 aaPredicted RBP9.78□□□□□ -0.84
RTP3-201ENST00000296142 CDC37Q16543 378 aaPredicted RBP9.78□□□□□ -0.84
RTP3-201ENST00000296142 KIAA0753Q2KHM9 967 aa9.78□□□□□ -0.84
RTP3-201ENST00000296142 CNKSR3Q6P9H4 555 aa9.78□□□□□ -0.84
RTP3-201ENST00000296142 C7orf31Q8N865 590 aa9.78□□□□□ -0.84
RTP3-201ENST00000296142 SYTL5Q8TDW5 730 aaPredicted RBP9.78□□□□□ -0.84
RTP3-201ENST00000296142 AFAP1L1Q8TED9 768 aa9.78□□□□□ -0.84
RTP3-201ENST00000296142 TMX3Q96JJ7 454 aa9.78□□□□□ -0.84
RTP3-201ENST00000296142 TGS1Q96RS0 853 aaKnown RBP9.78□□□□□ -0.84
RTP3-201ENST00000296142 RMDN3Q96TC7 470 aa9.78□□□□□ -0.84
RTP3-201ENST00000296142 LSG1Q9H089 658 aaKnown RBP9.78□□□□□ -0.84
RTP3-201ENST00000296142 BCAS3Q9H6U6 928 aa9.78□□□□□ -0.84
RTP3-201ENST00000296142 FOXD4L1Q9NU39 408 aa9.78□□□□□ -0.84
RTP3-201ENST00000296142 GTF2IRD1Q9UHL9 959 aa9.78□□□□□ -0.84
RTP3-201ENST00000296142 LIMCH1Q9UPQ0 1083 aa9.78□□□□□ -0.84
RTP3-201ENST00000296142 U3KPZ7 1027 aaPredicted RBP9.78□□□□□ -0.84
RTP3-201ENST00000296142 TECTAO75443 2155 aa9.78□□□□□ -0.84
RTP3-201ENST00000296142 LAMA4Q16363 1823 aa9.77□□□□□ -0.84
RTP3-201ENST00000296142 ZDBF2Q9HCK1 2354 aa9.77□□□□□ -0.84
RTP3-201ENST00000296142 MYO10Q9HD67 2058 aa9.77□□□□□ -0.85
RTP3-201ENST00000296142 PI4K2BG5E9Z4 385 aa9.77□□□□□ -0.85
RTP3-201ENST00000296142 GPR37L1O60883 481 aa9.77□□□□□ -0.85
RTP3-201ENST00000296142 CFBP00751 764 aa9.77□□□□□ -0.85
RTP3-201ENST00000296142 HMGB1P09429 215 aaKnown RBP9.77□□□□□ -0.85
RTP3-201ENST00000296142 CTSHP09668 335 aa9.77□□□□□ -0.85
RTP3-201ENST00000296142 HSPD1P10809 573 aaKnown RBP9.77□□□□□ -0.85
RTP3-201ENST00000296142 CASTP20810 708 aaKnown RBP9.77□□□□□ -0.85
RTP3-201ENST00000296142 ERVK-21P61565 698 aa9.77□□□□□ -0.85
RTP3-201ENST00000296142 PTPN11Q06124 597 aaPredicted RBP9.77□□□□□ -0.85
RTP3-201ENST00000296142 CUL4AQ13619 759 aa9.77□□□□□ -0.85
RTP3-201ENST00000296142 MFSD10Q14728 455 aa9.77□□□□□ -0.85
RTP3-201ENST00000296142 CLUL1Q15846 466 aa9.77□□□□□ -0.85
RTP3-201ENST00000296142 CSPP1Q1MSJ5 1256 aa9.77□□□□□ -0.85
RTP3-201ENST00000296142 TRIM71Q2Q1W2 868 aaKnown RBP9.77□□□□□ -0.85
RTP3-201ENST00000296142 PPP4R3BQ5MIZ7 849 aa9.77□□□□□ -0.85
RTP3-201ENST00000296142 ARHGEF16Q5VV41 709 aa9.77□□□□□ -0.85
RTP3-201ENST00000296142 PTCRAQ6ISU1 281 aaPredicted RBP9.77□□□□□ -0.85
RTP3-201ENST00000296142 TRAF7Q6Q0C0 670 aa9.77□□□□□ -0.85
RTP3-201ENST00000296142 MFSD6Q6ZSS7 791 aa9.77□□□□□ -0.85
RTP3-201ENST00000296142 FAM178BQ8IXR5 827 aa9.77□□□□□ -0.85
RTP3-201ENST00000296142 DHX37Q8IY37 1157 aaKnown RBP9.77□□□□□ -0.85
RTP3-201ENST00000296142 ADGRF4Q8IZF3 695 aa9.77□□□□□ -0.85
RTP3-201ENST00000296142 GJD3Q8N144 294 aa9.77□□□□□ -0.85
RTP3-201ENST00000296142 CCDC155Q8N6L0 562 aa9.77□□□□□ -0.85
RTP3-201ENST00000296142 FBXO22Q8NEZ5 403 aa9.77□□□□□ -0.85
RTP3-201ENST00000296142 DBF4BQ8NFT6 615 aa9.77□□□□□ -0.85
RTP3-201ENST00000296142 DNERQ8NFT8 737 aa9.77□□□□□ -0.85
RTP3-201ENST00000296142 GPKOWQ92917 476 aaPredicted RBP eCLIP9.77□□□□□ -0.85
RTP3-201ENST00000296142 MPHOSPH6Q99547 160 aaKnown RBP9.77□□□□□ -0.85
RTP3-201ENST00000296142 RAD9AQ99638 391 aa9.77□□□□□ -0.85
RTP3-201ENST00000296142 HELLSQ9NRZ9 838 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms