RNA–Protein interactions for RNA: ENST00000295886.4

NKX6-1-201, Transcript of NK6 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX6-1, Length 2,628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1-201ENST00000295886 LRRC4BQ9NT99 713 aa21.66■■□□□ 1.06
NKX6-1-201ENST00000295886 E9PMD0 336 aa21.65■■□□□ 1.06
NKX6-1-201ENST00000295886 ATP2B4P23634 1241 aa21.65■■□□□ 1.06
NKX6-1-201ENST00000295886 NAP1L1P55209 391 aaKnown RBP21.65■■□□□ 1.06
NKX6-1-201ENST00000295886 ARID5AQ03989 594 aa21.65■■□□□ 1.06
NKX6-1-201ENST00000295886 COASYQ13057 564 aa21.65■■□□□ 1.06
NKX6-1-201ENST00000295886 MTMR8Q96EF0 704 aa21.65■■□□□ 1.06
NKX6-1-201ENST00000295886 MED4Q9NPJ6 270 aa21.65■■□□□ 1.06
NKX6-1-201ENST00000295886 CWC15Q9P013 229 aaKnown RBP21.65■■□□□ 1.06
NKX6-1-201ENST00000295886 TARSL2A2RTX5 802 aaKnown RBP21.65■■□□□ 1.06
NKX6-1-201ENST00000295886 USP17L10C9JJH3 530 aa21.65■■□□□ 1.06
NKX6-1-201ENST00000295886 MPHOSPH10O00566 681 aaKnown RBP21.65■■□□□ 1.06
NKX6-1-201ENST00000295886 SCNN1DP51172 638 aa21.65■■□□□ 1.06
NKX6-1-201ENST00000295886 VPS72Q15906 364 aa21.65■■□□□ 1.06
NKX6-1-201ENST00000295886 C15orf52Q6ZUT6 534 aaKnown RBP21.65■■□□□ 1.06
NKX6-1-201ENST00000295886 PLCD3Q8N3E9 789 aa21.65■■□□□ 1.06
NKX6-1-201ENST00000295886 RPGRIP1Q96KN7 1286 aa21.65■■□□□ 1.06
NKX6-1-201ENST00000295886 OSBPL9Q96SU4 736 aa21.65■■□□□ 1.06
NKX6-1-201ENST00000295886 RAB34Q9BZG1 259 aa21.65■■□□□ 1.06
NKX6-1-201ENST00000295886 SMARCA1P28370 1054 aa21.64■■□□□ 1.06
NKX6-1-201ENST00000295886 PDE4CQ08493 712 aa21.64■■□□□ 1.06
NKX6-1-201ENST00000295886 ASPRV1Q53RT3 343 aa21.64■■□□□ 1.06
NKX6-1-201ENST00000295886 CCDC84Q86UT8 332 aaPredicted RBP21.64■■□□□ 1.06
NKX6-1-201ENST00000295886 C10orf67Q8IYJ2 551 aa21.64■■□□□ 1.06
NKX6-1-201ENST00000295886 DNAJC19Q96DA6 116 aa21.64■■□□□ 1.06
NKX6-1-201ENST00000295886 MS4A14Q96JA4 679 aa21.64■■□□□ 1.06
NKX6-1-201ENST00000295886 RASSF4Q9H2L5 321 aa21.64■■□□□ 1.06
NKX6-1-201ENST00000295886 GAKO14976 1311 aa21.64■■□□□ 1.05
NKX6-1-201ENST00000295886 TRIM66O15016 1216 aa21.64■■□□□ 1.05
NKX6-1-201ENST00000295886 NOVP48745 357 aa21.64■■□□□ 1.05
NKX6-1-201ENST00000295886 LRRC63Q05C16 580 aa21.64■■□□□ 1.05
NKX6-1-201ENST00000295886 SHROOM1Q2M3G4 852 aaPredicted RBP21.64■■□□□ 1.05
NKX6-1-201ENST00000295886 CCDC40Q4G0X9 1142 aa21.64■■□□□ 1.05
NKX6-1-201ENST00000295886 TMEM119Q4V9L6 283 aa21.64■■□□□ 1.05
NKX6-1-201ENST00000295886 MYOCDQ8IZQ8 938 aa21.64■■□□□ 1.05
NKX6-1-201ENST00000295886 SPATA4Q8NEY3 305 aa21.64■■□□□ 1.05
NKX6-1-201ENST00000295886 USP17L15C9J2P7 530 aa21.63■■□□□ 1.05
NKX6-1-201ENST00000295886 USP17L13C9JLJ4 530 aa21.63■■□□□ 1.05
NKX6-1-201ENST00000295886 USP17L11C9JVI0 530 aa21.63■■□□□ 1.05
NKX6-1-201ENST00000295886 USP17L18D6R9N7 530 aa21.63■■□□□ 1.05
NKX6-1-201ENST00000295886 USP17L22D6RA61 530 aa21.63■■□□□ 1.05
NKX6-1-201ENST00000295886 USP17L17D6RBQ6 530 aa21.63■■□□□ 1.05
NKX6-1-201ENST00000295886 USP17L19D6RCP7 530 aa21.63■■□□□ 1.05
NKX6-1-201ENST00000295886 USP17L20D6RJB6 530 aa21.63■■□□□ 1.05
NKX6-1-201ENST00000295886 PRPF6O94906 941 aaKnown RBP21.63■■□□□ 1.05
NKX6-1-201ENST00000295886 EHHADHQ08426 723 aa21.63■■□□□ 1.05
NKX6-1-201ENST00000295886 ZNF543Q08ER8 600 aa21.63■■□□□ 1.05
NKX6-1-201ENST00000295886 USP17L24Q0WX57 530 aa21.63■■□□□ 1.05
NKX6-1-201ENST00000295886 PDXDC1Q6P996 788 aa21.63■■□□□ 1.05
NKX6-1-201ENST00000295886 USP17L6PQ6QN14 398 aa21.63■■□□□ 1.05
NKX6-1-201ENST00000295886 PANK4Q9NVE7 773 aa21.63■■□□□ 1.05
NKX6-1-201ENST00000295886 AGPSO00116 658 aa21.63■■□□□ 1.05
NKX6-1-201ENST00000295886 MYO1CO00159 1063 aa21.63■■□□□ 1.05
NKX6-1-201ENST00000295886 SERPINB2P05120 415 aa21.63■■□□□ 1.05
NKX6-1-201ENST00000295886 MCM3P25205 808 aa21.63■■□□□ 1.05
NKX6-1-201ENST00000295886 PDIA5Q14554 519 aa21.63■■□□□ 1.05
NKX6-1-201ENST00000295886 FNBP4Q8N3X1 1017 aaPredicted RBP21.63■■□□□ 1.05
NKX6-1-201ENST00000295886 TSG101Q99816 390 aa21.63■■□□□ 1.05
NKX6-1-201ENST00000295886 ZHX3Q9H4I2 956 aa21.63■■□□□ 1.05
NKX6-1-201ENST00000295886 PCDHA12Q9UN75 941 aa21.63■■□□□ 1.05
NKX6-1-201ENST00000295886 KIAA1024Q9UPX6 916 aa21.63■■□□□ 1.05
NKX6-1-201ENST00000295886 FAM196BA6NMK8 535 aa21.62■■□□□ 1.05
NKX6-1-201ENST00000295886 AARSP49588 968 aaKnown RBP eCLIP21.62■■□□□ 1.05
NKX6-1-201ENST00000295886 GABPAQ06546 454 aa21.62■■□□□ 1.05
NKX6-1-201ENST00000295886 HGSNATQ68CP4 663 aa21.62■■□□□ 1.05
NKX6-1-201ENST00000295886 SND1Q7KZF4 910 aaKnown RBP eCLIP21.62■■□□□ 1.05
NKX6-1-201ENST00000295886 FAM163AQ96GL9 167 aaPredicted RBP21.62■■□□□ 1.05
NKX6-1-201ENST00000295886 VIPAS39Q9H9C1 493 aa21.62■■□□□ 1.05
NKX6-1-201ENST00000295886 RIC8AQ9NPQ8 531 aa21.62■■□□□ 1.05
NKX6-1-201ENST00000295886 PNMA6FA0A0J9YX94 578 aa21.62■■□□□ 1.05
NKX6-1-201ENST00000295886 POTEB3A0JP26 581 aa21.62■■□□□ 1.05
NKX6-1-201ENST00000295886 POTECB2RU33 542 aa21.62■■□□□ 1.05
NKX6-1-201ENST00000295886 TLR2O60603 784 aa21.62■■□□□ 1.05
NKX6-1-201ENST00000295886 STAT3P40763 770 aa21.62■■□□□ 1.05
NKX6-1-201ENST00000295886 POLR2FP61218 127 aaKnown RBP21.62■■□□□ 1.05
NKX6-1-201ENST00000295886 FAM26FQ5R3K3 315 aa21.62■■□□□ 1.05
NKX6-1-201ENST00000295886 POTEBQ6S5H4 581 aa21.62■■□□□ 1.05
NKX6-1-201ENST00000295886 ANKRD65E5RJM6 399 aa21.61■■□□□ 1.05
NKX6-1-201ENST00000295886 FGFR1OPO95684 399 aaKnown RBP21.61■■□□□ 1.05
NKX6-1-201ENST00000295886 TTLL1O95922 423 aa21.61■■□□□ 1.05
NKX6-1-201ENST00000295886 SNHG28P0DPA3 235 aa21.61■■□□□ 1.05
NKX6-1-201ENST00000295886 ORC2Q13416 577 aaPredicted RBP21.61■■□□□ 1.05
NKX6-1-201ENST00000295886 CCDC181Q5TID7 509 aa21.61■■□□□ 1.05
NKX6-1-201ENST00000295886 CERS3Q8IU89 383 aa21.61■■□□□ 1.05
NKX6-1-201ENST00000295886 AFAP1L1Q8TED9 768 aa21.61■■□□□ 1.05
NKX6-1-201ENST00000295886 LSM14BQ9BX40 385 aaKnown RBP21.61■■□□□ 1.05
NKX6-1-201ENST00000295886 COL4A3BPQ9Y5P4 624 aa21.61■■□□□ 1.05
NKX6-1-201ENST00000295886 NOL4O94818 638 aa21.61■■□□□ 1.05
NKX6-1-201ENST00000295886 CRY2Q49AN0 593 aa21.61■■□□□ 1.05
NKX6-1-201ENST00000295886 LRRC31Q6UY01 552 aa21.61■■□□□ 1.05
NKX6-1-201ENST00000295886 CERS5Q8N5B7 392 aa21.61■■□□□ 1.05
NKX6-1-201ENST00000295886 ALS2CR12Q96Q35 445 aa21.61■■□□□ 1.05
NKX6-1-201ENST00000295886 RSPH14Q9UHP6 348 aa21.61■■□□□ 1.05
NKX6-1-201ENST00000295886 LCA5LO95447 670 aa21.6■■□□□ 1.05
NKX6-1-201ENST00000295886 ASTE1Q2TB18 679 aaPredicted RBP21.6■■□□□ 1.05
NKX6-1-201ENST00000295886 ZCWPW2Q504Y3 356 aa21.6■■□□□ 1.05
NKX6-1-201ENST00000295886 SLF2Q8IX21 1173 aa21.6■■□□□ 1.05
NKX6-1-201ENST00000295886 CUL5Q93034 780 aa21.6■■□□□ 1.05
NKX6-1-201ENST00000295886 RBM17Q96I25 401 aaKnown RBP21.6■■□□□ 1.05
NKX6-1-201ENST00000295886 TLR10Q9BXR5 811 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms