RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 AKR1B1P15121 316 aa18.65■□□□□ 0.58
CHRNE-201ENST00000293780 SLC1A4P43007 532 aa18.65■□□□□ 0.58
CHRNE-201ENST00000293780 APBA1Q02410 837 aa18.65■□□□□ 0.58
CHRNE-201ENST00000293780 LRRC63Q05C16 580 aa18.65■□□□□ 0.58
CHRNE-201ENST00000293780 PDE4CQ08493 712 aa18.65■□□□□ 0.58
CHRNE-201ENST00000293780 PDIA5Q14554 519 aa18.65■□□□□ 0.58
CHRNE-201ENST00000293780 SND1Q7KZF4 910 aaKnown RBP eCLIP18.65■□□□□ 0.58
CHRNE-201ENST00000293780 CACNA2D4Q7Z3S7 1137 aa18.65■□□□□ 0.58
CHRNE-201ENST00000293780 GOLGA6L1Q8N7Z2 621 aa18.65■□□□□ 0.58
CHRNE-201ENST00000293780 QTRT2Q9H974 415 aaKnown RBP18.65■□□□□ 0.58
CHRNE-201ENST00000293780 KANSL2Q9H9L4 492 aa18.65■□□□□ 0.58
CHRNE-201ENST00000293780 FGFR1OPO95684 399 aaKnown RBP18.65■□□□□ 0.58
CHRNE-201ENST00000293780 TMEM119Q4V9L6 283 aa18.65■□□□□ 0.58
CHRNE-201ENST00000293780 HGSNATQ68CP4 663 aa18.65■□□□□ 0.58
CHRNE-201ENST00000293780 CNBD1Q8NA66 436 aa18.65■□□□□ 0.58
CHRNE-201ENST00000293780 HAS1Q92839 578 aa18.65■□□□□ 0.58
CHRNE-201ENST00000293780 FAM184BQ9ULE4 1060 aa18.65■□□□□ 0.58
CHRNE-201ENST00000293780 PPP1R11O60927 126 aaPredicted RBP18.64■□□□□ 0.58
CHRNE-201ENST00000293780 SKIDA1Q1XH10 827 aa18.64■□□□□ 0.58
CHRNE-201ENST00000293780 TTBK2Q6IQ55 1244 aa18.64■□□□□ 0.58
CHRNE-201ENST00000293780 C15orf52Q6ZUT6 534 aaKnown RBP18.64■□□□□ 0.58
CHRNE-201ENST00000293780 ZNF572Q7Z3I7 529 aaPredicted RBP18.64■□□□□ 0.58
CHRNE-201ENST00000293780 DNAJC19Q96DA6 116 aa18.64■□□□□ 0.58
CHRNE-201ENST00000293780 MS4A14Q96JA4 679 aa18.64■□□□□ 0.58
CHRNE-201ENST00000293780 RSPH14Q9UHP6 348 aa18.64■□□□□ 0.58
CHRNE-201ENST00000293780 IL1R1P14778 569 aa18.64■□□□□ 0.57
CHRNE-201ENST00000293780 PRLRP16471 622 aa18.64■□□□□ 0.57
CHRNE-201ENST00000293780 COASYQ13057 564 aa18.64■□□□□ 0.57
CHRNE-201ENST00000293780 DPP8Q6V1X1 898 aaPredicted RBP18.64■□□□□ 0.57
CHRNE-201ENST00000293780 TLR10Q9BXR5 811 aa18.64■□□□□ 0.57
CHRNE-201ENST00000293780 HYOU1Q9Y4L1 999 aa18.64■□□□□ 0.57
CHRNE-201ENST00000293780 ABCB11O95342 1321 aa18.63■□□□□ 0.57
CHRNE-201ENST00000293780 PJA2O43164 708 aa18.63■□□□□ 0.57
CHRNE-201ENST00000293780 NOL4O94818 638 aa18.63■□□□□ 0.57
CHRNE-201ENST00000293780 SSBP05455 408 aaKnown RBP eCLIP18.63■□□□□ 0.57
CHRNE-201ENST00000293780 CACNB1Q02641 598 aaPredicted RBP18.63■□□□□ 0.57
CHRNE-201ENST00000293780 KLHDC7AQ5VTJ3 777 aa18.63■□□□□ 0.57
CHRNE-201ENST00000293780 CCDC70Q6NSX1 233 aa18.63■□□□□ 0.57
CHRNE-201ENST00000293780 MYOCDQ8IZQ8 938 aa18.63■□□□□ 0.57
CHRNE-201ENST00000293780 ALS2CR12Q96Q35 445 aa18.63■□□□□ 0.57
CHRNE-201ENST00000293780 TSG101Q99816 390 aa18.63■□□□□ 0.57
CHRNE-201ENST00000293780 RAB34Q9BZG1 259 aa18.63■□□□□ 0.57
CHRNE-201ENST00000293780 JMJD4Q9H9V9 463 aa18.63■□□□□ 0.57
CHRNE-201ENST00000293780 GOLGA6BA6NDN3 693 aa18.63■□□□□ 0.57
CHRNE-201ENST00000293780 ANKRD65E5RJM6 399 aa18.63■□□□□ 0.57
CHRNE-201ENST00000293780 TRAF5O00463 557 aa18.63■□□□□ 0.57
CHRNE-201ENST00000293780 TLR2O60603 784 aa18.63■□□□□ 0.57
CHRNE-201ENST00000293780 PLCG2P16885 1265 aa18.63■□□□□ 0.57
CHRNE-201ENST00000293780 NAP1L1P55209 391 aaKnown RBP18.63■□□□□ 0.57
CHRNE-201ENST00000293780 TDRD12Q587J7 1177 aaKnown RBP18.63■□□□□ 0.57
CHRNE-201ENST00000293780 TRAPPC3LQ5T215 181 aa18.63■□□□□ 0.57
CHRNE-201ENST00000293780 ADGRF4Q8IZF3 695 aa18.63■□□□□ 0.57
CHRNE-201ENST00000293780 RPGRQ92834 1020 aaKnown RBP18.63■□□□□ 0.57
CHRNE-201ENST00000293780 DDX25Q9UHL0 483 aaKnown RBP18.63■□□□□ 0.57
CHRNE-201ENST00000293780 THSD7AQ9UPZ6 1657 aa18.63■□□□□ 0.57
CHRNE-201ENST00000293780 NPHP3-ACAD11A0A0J9YXS1 232 aa18.62■□□□□ 0.57
CHRNE-201ENST00000293780 SLC16A2P36021 539 aa18.62■□□□□ 0.57
CHRNE-201ENST00000293780 CCDC181Q5TID7 509 aa18.62■□□□□ 0.57
CHRNE-201ENST00000293780 HAUS3Q68CZ6 603 aa18.62■□□□□ 0.57
CHRNE-201ENST00000293780 PRR5LQ6MZQ0 368 aa18.62■□□□□ 0.57
CHRNE-201ENST00000293780 NELFCDQ8IXH7 590 aa18.62■□□□□ 0.57
CHRNE-201ENST00000293780 SEPT12Q8IYM1 358 aa18.62■□□□□ 0.57
CHRNE-201ENST00000293780 RASSF4Q9H2L5 321 aa18.62■□□□□ 0.57
CHRNE-201ENST00000293780 POLLQ9UGP5 575 aa18.62■□□□□ 0.57
CHRNE-201ENST00000293780 GGA1Q9UJY5 639 aa18.62■□□□□ 0.57
CHRNE-201ENST00000293780 COL4A3BPQ9Y5P4 624 aa18.62■□□□□ 0.57
CHRNE-201ENST00000293780 E9PMD0 336 aa18.62■□□□□ 0.57
CHRNE-201ENST00000293780 TCP1P17987 556 aaKnown RBP18.62■□□□□ 0.57
CHRNE-201ENST00000293780 DNA2P51530 1060 aa18.62■□□□□ 0.57
CHRNE-201ENST00000293780 PSMD2Q13200 908 aa18.62■□□□□ 0.57
CHRNE-201ENST00000293780 CCDC40Q4G0X9 1142 aa18.62■□□□□ 0.57
CHRNE-201ENST00000293780 ZCWPW2Q504Y3 356 aa18.62■□□□□ 0.57
CHRNE-201ENST00000293780 ASPRV1Q53RT3 343 aa18.62■□□□□ 0.57
CHRNE-201ENST00000293780 CERS3Q8IU89 383 aa18.62■□□□□ 0.57
CHRNE-201ENST00000293780 PLCD3Q8N3E9 789 aa18.62■□□□□ 0.57
CHRNE-201ENST00000293780 RIC8AQ9NPQ8 531 aa18.62■□□□□ 0.57
CHRNE-201ENST00000293780 RBM12Q9NTZ6 932 aaKnown RBP18.62■□□□□ 0.57
CHRNE-201ENST00000293780 PANK4Q9NVE7 773 aa18.62■□□□□ 0.57
CHRNE-201ENST00000293780 hCG_1984214I3L0E3 225 aa18.61■□□□□ 0.57
CHRNE-201ENST00000293780 SLURP2P0DP57 97 aa18.61■□□□□ 0.57
CHRNE-201ENST00000293780 SNHG28P0DPA3 235 aa18.61■□□□□ 0.57
CHRNE-201ENST00000293780 FKBP3Q00688 224 aaKnown RBP18.61■□□□□ 0.57
CHRNE-201ENST00000293780 ITIH3Q06033 890 aa18.61■□□□□ 0.57
CHRNE-201ENST00000293780 ZNF713Q8N859 430 aaPredicted RBP18.61■□□□□ 0.57
CHRNE-201ENST00000293780 FAM163AQ96GL9 167 aaPredicted RBP18.61■□□□□ 0.57
CHRNE-201ENST00000293780 LSM14BQ9BX40 385 aaKnown RBP18.61■□□□□ 0.57
CHRNE-201ENST00000293780 DAGLAQ9Y4D2 1042 aa18.61■□□□□ 0.57
CHRNE-201ENST00000293780 GAKO14976 1311 aa18.61■□□□□ 0.57
CHRNE-201ENST00000293780 F8W031 263 aaPredicted RBP18.61■□□□□ 0.57
CHRNE-201ENST00000293780 MARCH6O60337 910 aa18.61■□□□□ 0.57
CHRNE-201ENST00000293780 FAM83BQ5T0W9 1011 aa18.61■□□□□ 0.57
CHRNE-201ENST00000293780 TSEN2Q8NCE0 465 aaKnown RBP18.61■□□□□ 0.57
CHRNE-201ENST00000293780 PNMA6FA0A0J9YX94 578 aa18.6■□□□□ 0.57
CHRNE-201ENST00000293780 ATP2B4P23634 1241 aa18.6■□□□□ 0.57
CHRNE-201ENST00000293780 CLK2P49760 499 aaKnown RBP18.6■□□□□ 0.57
CHRNE-201ENST00000293780 POLR2FP61218 127 aaKnown RBP18.6■□□□□ 0.57
CHRNE-201ENST00000293780 GABPAQ06546 454 aa18.6■□□□□ 0.57
CHRNE-201ENST00000293780 ENOX2Q16206 610 aaKnown RBP18.6■□□□□ 0.57
CHRNE-201ENST00000293780 FAM26FQ5R3K3 315 aa18.6■□□□□ 0.57
CHRNE-201ENST00000293780 PPP4R3AQ6IN85 833 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms